Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0404
(429 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g34760.1 68414.m04323 14-3-3 protein GF14 omicron (GRF11) ide... 46 1e-05
At1g22300.3 68414.m02790 14-3-3 protein GF14 epsilon (GRF10) ide... 44 4e-05
At1g22300.2 68414.m02789 14-3-3 protein GF14 epsilon (GRF10) ide... 44 4e-05
At1g22300.1 68414.m02788 14-3-3 protein GF14 epsilon (GRF10) ide... 44 4e-05
At1g26480.1 68414.m03229 14-3-3 protein GF14 iota (GRF12) identi... 43 1e-04
At2g42590.1 68415.m05270 14-3-3 protein GF14 mu (GRF9) identical... 41 4e-04
At1g78220.1 68414.m09115 14-3-3 protein GF14 pi (GRF13) similar ... 41 4e-04
At3g02520.1 68416.m00240 14-3-3 protein GF14 nu (GRF7) identical... 40 0.001
At4g09000.1 68417.m01487 14-3-3-like protein GF14 chi / general... 39 0.002
At5g38480.1 68418.m04651 14-3-3 protein GF14 psi (GRF3) (RCI1) i... 38 0.002
At1g78300.1 68414.m09125 14-3-3 protein GF14 omega (GRF2) identi... 38 0.003
At5g16050.1 68418.m01876 14-3-3 protein GF14 upsilon (GRF5) iden... 38 0.004
At1g35160.1 68414.m04360 14-3-3 protein GF14 phi (GRF4) identica... 38 0.004
At5g10450.1 68418.m01211 14-3-3 protein GF14 lambda (GRF6) (AFT1... 37 0.005
At5g65430.2 68418.m08229 14-3-3 protein GF14 kappa (GRF8) identi... 37 0.007
At5g65430.1 68418.m08228 14-3-3 protein GF14 kappa (GRF8) identi... 37 0.007
At1g22290.1 68414.m02787 14-3-3 protein GF14, putative (GRF10) s... 36 0.015
At2g42190.1 68415.m05221 expressed protein ; similar to GP|9826|... 29 1.3
At1g54440.1 68414.m06210 3'-5' exonuclease domain-containing pro... 29 1.3
At1g05670.1 68414.m00588 UDP-glucoronosyl/UDP-glucosyl transfera... 29 1.8
At3g03960.1 68416.m00415 chaperonin, putative similar to SWISS-P... 27 4.1
At2g15760.1 68415.m01804 calmodulin-binding protein similar to A... 27 5.4
At1g18180.1 68414.m02260 expressed protein 27 5.4
At2g31030.1 68415.m03783 oxysterol-binding family protein simila... 27 7.1
>At1g34760.1 68414.m04323 14-3-3 protein GF14 omicron (GRF11)
identical to SP:Q9S9Z8, 14-3-3-like protein GF14 omicron
(General regulatory factor 11){Arabidopsis thaliana}
Length = 255
Score = 45.6 bits (103), Expect = 1e-05
Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Frame = +1
Query: 262 LLSVAYKNVVGXRRSXGVSFPQLNRKTRVQKGNSXWQR----YRVKVXKELXEICYDVL 426
LLSV YKNV+G RR+ + +K KGN + YR KV +EL +ICYD+L
Sbjct: 45 LLSVGYKNVIGARRASWRILSSIEQKEE-SKGNEQNAKRIKDYRTKVEEELSKICYDIL 102
Score = 40.7 bits (91), Expect = 4e-04
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = +2
Query: 131 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNE 253
M ++ + V AKL EQAERYD+M AMK+V VEL+ E
Sbjct: 1 MENERAKQVYLAKLNEQAERYDEMVEAMKKVAALDVELTIE 41
>At1g22300.3 68414.m02790 14-3-3 protein GF14 epsilon (GRF10)
identical to 14-3-3 protein GF14 epsilon GI:5802798,
SP:P48347 from [Arabidopsis thaliana]
Length = 251
Score = 44.0 bits (99), Expect = 4e-05
Identities = 21/41 (51%), Positives = 29/41 (70%)
Frame = +2
Query: 131 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNE 253
M ++E+ V AKL+EQ ERYD+M AMK+V + VEL+ E
Sbjct: 1 MENEREKQVYLAKLSEQTERYDEMVEAMKKVAQLDVELTVE 41
Score = 38.3 bits (85), Expect = 0.002
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Frame = +1
Query: 262 LLSVAYKNVVGXRRSXGVSFPQLNRKTRVQKGN----SXWQRYRVKVXKELXEICYDVL 426
L+SV YKNV+G RR+ + +K KGN + YR +V EL ++C D+L
Sbjct: 45 LVSVGYKNVIGARRASWRILSSIEQKEE-SKGNDENVKRLKNYRKRVEDELAKVCNDIL 102
Score = 26.2 bits (55), Expect = 9.4
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +3
Query: 309 WRVISSIEQKNEGSERXQXMAKI 377
WR++SSIEQK E + + ++
Sbjct: 61 WRILSSIEQKEESKGNDENVKRL 83
>At1g22300.2 68414.m02789 14-3-3 protein GF14 epsilon (GRF10)
identical to 14-3-3 protein GF14 epsilon GI:5802798,
SP:P48347 from [Arabidopsis thaliana]
Length = 254
Score = 44.0 bits (99), Expect = 4e-05
Identities = 21/41 (51%), Positives = 29/41 (70%)
Frame = +2
Query: 131 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNE 253
M ++E+ V AKL+EQ ERYD+M AMK+V + VEL+ E
Sbjct: 1 MENEREKQVYLAKLSEQTERYDEMVEAMKKVAQLDVELTVE 41
Score = 38.3 bits (85), Expect = 0.002
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Frame = +1
Query: 262 LLSVAYKNVVGXRRSXGVSFPQLNRKTRVQKGN----SXWQRYRVKVXKELXEICYDVL 426
L+SV YKNV+G RR+ + +K KGN + YR +V EL ++C D+L
Sbjct: 45 LVSVGYKNVIGARRASWRILSSIEQKEE-SKGNDENVKRLKNYRKRVEDELAKVCNDIL 102
Score = 26.2 bits (55), Expect = 9.4
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +3
Query: 309 WRVISSIEQKNEGSERXQXMAKI 377
WR++SSIEQK E + + ++
Sbjct: 61 WRILSSIEQKEESKGNDENVKRL 83
>At1g22300.1 68414.m02788 14-3-3 protein GF14 epsilon (GRF10)
identical to 14-3-3 protein GF14 epsilon GI:5802798,
SP:P48347 from [Arabidopsis thaliana]
Length = 254
Score = 44.0 bits (99), Expect = 4e-05
Identities = 21/41 (51%), Positives = 29/41 (70%)
Frame = +2
Query: 131 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNE 253
M ++E+ V AKL+EQ ERYD+M AMK+V + VEL+ E
Sbjct: 1 MENEREKQVYLAKLSEQTERYDEMVEAMKKVAQLDVELTVE 41
Score = 38.3 bits (85), Expect = 0.002
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Frame = +1
Query: 262 LLSVAYKNVVGXRRSXGVSFPQLNRKTRVQKGN----SXWQRYRVKVXKELXEICYDVL 426
L+SV YKNV+G RR+ + +K KGN + YR +V EL ++C D+L
Sbjct: 45 LVSVGYKNVIGARRASWRILSSIEQKEE-SKGNDENVKRLKNYRKRVEDELAKVCNDIL 102
Score = 26.2 bits (55), Expect = 9.4
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +3
Query: 309 WRVISSIEQKNEGSERXQXMAKI 377
WR++SSIEQK E + + ++
Sbjct: 61 WRILSSIEQKEESKGNDENVKRL 83
>At1g26480.1 68414.m03229 14-3-3 protein GF14 iota (GRF12) identical
to 14-3-3 protein GF14iota GI:12963453 from [Arabidopsis
thaliana]
Length = 268
Score = 42.7 bits (96), Expect = 1e-04
Identities = 21/46 (45%), Positives = 28/46 (60%)
Frame = +2
Query: 116 LPSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNE 253
+ SS ++E V AKL+EQAERYD+M MK+V EL+ E
Sbjct: 1 MSSSGSDKERETFVYMAKLSEQAERYDEMVETMKKVARVNSELTVE 46
Score = 39.9 bits (89), Expect = 7e-04
Identities = 25/59 (42%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Frame = +1
Query: 262 LLSVAYKNVVGXRRSXGVSFPQLNRKTRVQKGN----SXWQRYRVKVXKELXEICYDVL 426
LLSV YKNV+G RR+ + +K KGN + YR KV EL IC D+L
Sbjct: 50 LLSVGYKNVIGARRASWRIMSSIEQKEE-SKGNESNVKQIKGYRQKVEDELANICQDIL 107
>At2g42590.1 68415.m05270 14-3-3 protein GF14 mu (GRF9) identical to
GF14 mu GI:3551052, SP:Q96299 from [Arabidopsis
thaliana]
Length = 263
Score = 40.7 bits (91), Expect = 4e-04
Identities = 25/59 (42%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Frame = +1
Query: 262 LLSVAYKNVVGXRRSXGVSFPQLNRKTRVQKGN----SXWQRYRVKVXKELXEICYDVL 426
LLSV YKNV+G RR+ F + +K V KGN + Y KV EL IC D++
Sbjct: 47 LLSVGYKNVIGSRRASWRIFSSIEQKEAV-KGNDVNVKRIKEYMEKVELELSNICIDIM 104
Score = 39.1 bits (87), Expect = 0.001
Identities = 17/38 (44%), Positives = 27/38 (71%)
Frame = +2
Query: 140 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNE 253
+++ V AKL+EQAERY++M +MK V + V+L+ E
Sbjct: 6 ERDTFVYLAKLSEQAERYEEMVESMKSVAKLNVDLTVE 43
>At1g78220.1 68414.m09115 14-3-3 protein GF14 pi (GRF13) similar to
GF14 epsilon isoform GI:1022778 from [Arabidopsis
thaliana]; contains Pfam profile: PF00244 14-3-3
proteins
Length = 245
Score = 40.7 bits (91), Expect = 4e-04
Identities = 19/41 (46%), Positives = 28/41 (68%)
Frame = +2
Query: 131 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNE 253
M ++E+L+ AKL QA RYDD+ +M++V E +ELS E
Sbjct: 1 MENEREKLIYLAKLGCQAGRYDDVMKSMRKVCELDIELSEE 41
>At3g02520.1 68416.m00240 14-3-3 protein GF14 nu (GRF7) identical to
14-3-3 protein GF14 nu GI:1531631 from [Arabidopsis
thaliana]
Length = 265
Score = 39.5 bits (88), Expect = 0.001
Identities = 19/34 (55%), Positives = 25/34 (73%)
Frame = +2
Query: 131 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET 232
MS +EE V AKLAEQAERY++M M++V +T
Sbjct: 1 MSSSREENVYLAKLAEQAERYEEMVEFMEKVAKT 34
Score = 37.9 bits (84), Expect = 0.003
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Frame = +1
Query: 262 LLSVAYKNVVGXRRSXGVSFPQLNRKTRVQKGN----SXWQRYRVKVXKELXEICYDVL 426
LLSVAYKNV+G RR+ + +K +GN S + YR K+ EL +IC +L
Sbjct: 47 LLSVAYKNVIGARRASWRIISSIEQKEE-SRGNDDHVSIIKDYRGKIETELSKICDGIL 104
>At4g09000.1 68417.m01487 14-3-3-like protein GF14 chi / general
regulatory factor 1 (GRF1) identical to 14-3-3 protein
GF14 chi chain GI:1702986, SP:P42643 from [Arabidopsis
thaliana]
Length = 267
Score = 38.7 bits (86), Expect = 0.002
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Frame = +1
Query: 262 LLSVAYKNVVGXRRSXGVSFPQLNRKTRVQKGN----SXWQRYRVKVXKELXEICYDVL 426
LLSVAYKNV+G RR+ + +K +GN S + YR K+ EL +IC +L
Sbjct: 52 LLSVAYKNVIGARRASWRIISSIEQKEE-SRGNDDHVSLIRDYRSKIETELSDICDGIL 109
Score = 35.1 bits (77), Expect = 0.020
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = +2
Query: 143 KEELVQRAKLAEQAERYDDMAAAMKEVTE 229
++E V AKLAEQAERY++M M++V +
Sbjct: 10 RDEFVYMAKLAEQAERYEEMVEFMEKVAK 38
>At5g38480.1 68418.m04651 14-3-3 protein GF14 psi (GRF3) (RCI1)
identical to 14-3-3 protein GF14 psi GI:1168200,
SP:P42644
Length = 255
Score = 38.3 bits (85), Expect = 0.002
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Frame = +1
Query: 262 LLSVAYKNVVGXRRSXGVSFPQLNRKTRVQKGN----SXWQRYRVKVXKELXEICYDVL 426
LLSVAYKNV+G RR+ + +K KGN + + YR K+ EL +IC +L
Sbjct: 46 LLSVAYKNVIGARRASWRIISSIEQKEE-SKGNEDHVAIIKDYRGKIESELSKICDGIL 103
Score = 37.1 bits (82), Expect = 0.005
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +2
Query: 143 KEELVQRAKLAEQAERYDDMAAAMKEVTET 232
+EE V AKLAEQAERY++M M++V +T
Sbjct: 4 REENVYMAKLAEQAERYEEMVEFMEKVAKT 33
>At1g78300.1 68414.m09125 14-3-3 protein GF14 omega (GRF2) identical
to GF14omega isoform GI:487791 from [Arabidopsis
thaliana]
Length = 259
Score = 37.9 bits (84), Expect = 0.003
Identities = 21/43 (48%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Frame = +2
Query: 131 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNE 253
M+ +EE V AKLAEQAERY++M M++V+ G EL+ E
Sbjct: 1 MASGREEFVYMAKLAEQAERYEEMVEFMEKVSAAVDGDELTVE 43
Score = 36.7 bits (81), Expect = 0.007
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Frame = +1
Query: 262 LLSVAYKNVVGXRRSXGVSFPQLNRKTRVQKGN----SXWQRYRVKVXKELXEICYDVL 426
LLSVAYKNV+G RR+ + +K +GN + + YR K+ EL IC +L
Sbjct: 47 LLSVAYKNVIGARRASWRIISSIEQKEE-SRGNDDHVTAIREYRSKIETELSGICDGIL 104
>At5g16050.1 68418.m01876 14-3-3 protein GF14 upsilon (GRF5)
identical to 14-3-3 protein GF14 upsilon GI:2232148 from
[Arabidopsis thaliana]
Length = 268
Score = 37.5 bits (83), Expect = 0.004
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Frame = +1
Query: 262 LLSVAYKNVVGXRRSXGVSFPQLNRKTRVQKGNSXW----QRYRVKVXKELXEICYDVL 426
LLSVAYKNV+G RR+ + +K +GNS + YR K+ EL +IC +L
Sbjct: 49 LLSVAYKNVIGARRASWRIISSIEQK-EDSRGNSDHVSIIKDYRGKIETELSKICDGIL 106
Score = 36.7 bits (81), Expect = 0.007
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +2
Query: 143 KEELVQRAKLAEQAERYDDMAAAMKEVTET 232
+EE V AKLAEQAERY++M M++V +T
Sbjct: 7 REENVYLAKLAEQAERYEEMVEFMEKVAKT 36
>At1g35160.1 68414.m04360 14-3-3 protein GF14 phi (GRF4) identical
to GF14 protein phi chain GI:1493805, SP:P46077 from
[Arabidopsis thaliana]
Length = 267
Score = 37.5 bits (83), Expect = 0.004
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +2
Query: 143 KEELVQRAKLAEQAERYDDMAAAMKEVTE 229
+EE V AKLAEQAERY++M M++V E
Sbjct: 11 REEFVYLAKLAEQAERYEEMVEFMEKVAE 39
Score = 37.5 bits (83), Expect = 0.004
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Frame = +1
Query: 262 LLSVAYKNVVGXRRSXGVSFPQLNRKTRVQKGN----SXWQRYRVKVXKELXEICYDVL 426
LLSVAYKNV+G RR+ + +K +GN + + YR K+ EL +IC +L
Sbjct: 53 LLSVAYKNVIGARRASWRIISSIEQKEE-SRGNDDHVTTIRDYRSKIESELSKICDGIL 110
>At5g10450.1 68418.m01211 14-3-3 protein GF14 lambda (GRF6) (AFT1)
identical to 14-3-3 GF14lambda GI:1345595 from
[Arabidopsis thaliana]
Length = 248
Score = 37.1 bits (82), Expect = 0.005
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +1
Query: 262 LLSVAYKNVVGXRRSXGVSFPQLNRKTRVQKGN---SXWQRYRVKVXKELXEICYDVL 426
LLSVAYKNV+G R+ + +K +K + S + YR KV EL +C +L
Sbjct: 50 LLSVAYKNVIGSLRAAWRIVSSIEQKEESRKNDEHVSLVKDYRSKVESELSSVCSGIL 107
Score = 33.5 bits (73), Expect = 0.062
Identities = 16/40 (40%), Positives = 27/40 (67%)
Frame = +2
Query: 134 SVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNE 253
++ +++ V AKLAEQAERY++M M+++ TG + E
Sbjct: 4 TLGRDQYVYMAKLAEQAERYEEMVQFMEQLV-TGATPAEE 42
Score = 27.1 bits (57), Expect = 5.4
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +3
Query: 309 WRVISSIEQKNEGSERXQXMAKI 377
WR++SSIEQK E + + ++ +
Sbjct: 66 WRIVSSIEQKEESRKNDEHVSLV 88
>At5g65430.2 68418.m08229 14-3-3 protein GF14 kappa (GRF8) identical
to 14-3-3 protein GF14 kappa GI:5802794, SP:P48348 from
[Arabidopsis thaliana]
Length = 246
Score = 36.7 bits (81), Expect = 0.007
Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +1
Query: 262 LLSVAYKNVVGXRRSXGVSFPQLNRKTRVQKGN---SXWQRYRVKVXKELXEICYDVL 426
LLSVAYKNV+G R+ + +K +K S + YR KV EL IC +L
Sbjct: 50 LLSVAYKNVIGSLRAAWRIVSSIEQKEESRKNEEHVSLVKDYRSKVETELSSICSGIL 107
Score = 33.1 bits (72), Expect = 0.082
Identities = 13/30 (43%), Positives = 23/30 (76%)
Frame = +2
Query: 134 SVDKEELVQRAKLAEQAERYDDMAAAMKEV 223
++ +++ V AKLAEQAERY++M M+++
Sbjct: 4 TLSRDQYVYMAKLAEQAERYEEMVQFMEQL 33
Score = 27.1 bits (57), Expect = 5.4
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +3
Query: 309 WRVISSIEQKNEGSERXQXMAKI 377
WR++SSIEQK E + + ++ +
Sbjct: 66 WRIVSSIEQKEESRKNEEHVSLV 88
>At5g65430.1 68418.m08228 14-3-3 protein GF14 kappa (GRF8) identical
to 14-3-3 protein GF14 kappa GI:5802794, SP:P48348 from
[Arabidopsis thaliana]
Length = 248
Score = 36.7 bits (81), Expect = 0.007
Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +1
Query: 262 LLSVAYKNVVGXRRSXGVSFPQLNRKTRVQKGN---SXWQRYRVKVXKELXEICYDVL 426
LLSVAYKNV+G R+ + +K +K S + YR KV EL IC +L
Sbjct: 50 LLSVAYKNVIGSLRAAWRIVSSIEQKEESRKNEEHVSLVKDYRSKVETELSSICSGIL 107
Score = 33.1 bits (72), Expect = 0.082
Identities = 13/30 (43%), Positives = 23/30 (76%)
Frame = +2
Query: 134 SVDKEELVQRAKLAEQAERYDDMAAAMKEV 223
++ +++ V AKLAEQAERY++M M+++
Sbjct: 4 TLSRDQYVYMAKLAEQAERYEEMVQFMEQL 33
Score = 27.1 bits (57), Expect = 5.4
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +3
Query: 309 WRVISSIEQKNEGSERXQXMAKI 377
WR++SSIEQK E + + ++ +
Sbjct: 66 WRIVSSIEQKEESRKNEEHVSLV 88
>At1g22290.1 68414.m02787 14-3-3 protein GF14, putative (GRF10)
similar to 14-3-3 protein GF14 epsilon GI:5802798 from
[Arabidopsis thaliana]
Length = 196
Score = 35.5 bits (78), Expect = 0.015
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Frame = +1
Query: 262 LLSVAYKNVVGXRRSXGVSFPQLNRKTRVQKGNSX----WQRYRVKVXKELXEICYDVL 426
L+SV YKNV+ RR+ + +K KGN + YR KV EL +IC D+L
Sbjct: 49 LVSVGYKNVISARRASLEILSSIVQKEE-SKGNEENVKKLKNYRNKVEDELAKICNDIL 106
>At2g42190.1 68415.m05221 expressed protein ; similar to
GP|9826|X07453
Length = 141
Score = 29.1 bits (62), Expect = 1.3
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +2
Query: 140 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEGGT 262
D EE+V++ ++ ++ E DD + K++ E ++SN T
Sbjct: 51 DDEEMVEKMEVEDEDEEIDDGSVTSKDLKERKRKMSNGSNT 91
>At1g54440.1 68414.m06210 3'-5' exonuclease domain-containing
protein / helicase and RNase D C-terminal
domain-containing protein / HRDC domain-containing
protein similar to SP|Q01780 Polymyositis/scleroderma
autoantigen 2 {Homo sapiens}; contains Pfam profiles
PF00570: HRDC domain, PF01612: 3'-5' exonuclease
Length = 738
Score = 29.1 bits (62), Expect = 1.3
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +2
Query: 167 KLAEQAERYDDMAAAMKEVTETGVELSNEGGTSFQ 271
KL E+ + +D+AAA++ V E V+L + +FQ
Sbjct: 229 KLVEEVKDLEDLAAALQSVEEFAVDLEHNQYRTFQ 263
>At1g05670.1 68414.m00588 UDP-glucoronosyl/UDP-glucosyl transferase
family protein similar to UDP-glucose:salicylic acid
glucosyltransferase [Nicotiana tabacum] GI:7385017;
contains Pfam profiles PF00201: UDP-glucoronosyl and
UDP-glucosyl transferase, PF01535: PPR repeat
Length = 1184
Score = 28.7 bits (61), Expect = 1.8
Identities = 12/37 (32%), Positives = 25/37 (67%)
Frame = +3
Query: 30 AREKLILCLNLLVQIHFSPSDKGISELVLFHRPRCPS 140
A+++++L + + V+I+ + S K +V+F+R CPS
Sbjct: 420 AQKRIVLFVKMTVRIYDAVSTKIPKSIVVFNRTPCPS 456
>At3g03960.1 68416.m00415 chaperonin, putative similar to
SWISS-PROT:P42932- T-complex protein 1, theta subunit
(TCP-1-theta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 549
Score = 27.5 bits (58), Expect = 4.1
Identities = 18/69 (26%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Frame = +2
Query: 122 SSTMSV-DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEGGTSFQL-LIRMS*V 295
S TM V +K+E++ R + A ++++ VT+ +++ + T+F + +R+S +
Sbjct: 151 SETMDVRNKDEVISRMRAAVASKQFGQEEIICSLVTDACIQVCPKNPTNFNVDNVRVSKL 210
Query: 296 LDG--HXAC 316
L G H +C
Sbjct: 211 LGGGLHNSC 219
>At2g15760.1 68415.m01804 calmodulin-binding protein similar to
AR781 GI:1669593 from [Arabidopsis thaliana]; AR781
complements pheromone receptor deficient mutant of
Shizosaccharomyces pombe
Length = 315
Score = 27.1 bits (57), Expect = 5.4
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2
Query: 65 GSNTFFPFRQGHQ*ISPLPSSTMSVDKEELVQRAKL 172
GS++ R+G + +SPL S + VD+EE VQ K+
Sbjct: 137 GSSSSRYDRKGSRSMSPLRVSDIMVDEEEEVQSTKM 172
>At1g18180.1 68414.m02260 expressed protein
Length = 292
Score = 27.1 bits (57), Expect = 5.4
Identities = 10/30 (33%), Positives = 14/30 (46%), Gaps = 5/30 (16%)
Frame = +3
Query: 129 RCPSTRKNWCNVPNW-----PNKLSDMTTW 203
+CP + WC+V W PN +M W
Sbjct: 164 KCPENKGKWCDVGVWKYSRHPNYFGEMLLW 193
>At2g31030.1 68415.m03783 oxysterol-binding family protein similar
to SWH1 [Saccharomyces cerevisiae] GI:402658; contains
Pfam profile PF01237: Oxysterol-binding protein
Length = 489
Score = 26.6 bits (56), Expect = 7.1
Identities = 11/47 (23%), Positives = 25/47 (53%), Gaps = 6/47 (12%)
Frame = +1
Query: 301 RSXGVSFPQLNRKTRV------QKGNSXWQRYRVKVXKELXEICYDV 423
++ G ++P +NR+ ++ +K S W + + K+L ++C V
Sbjct: 100 KTIGFNYPHVNRRNKLPDPVEKEKSVSLWSMIKDNIGKDLTKVCLPV 146
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,034,712
Number of Sequences: 28952
Number of extensions: 143382
Number of successful extensions: 408
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 391
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 675111616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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