Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0401
         (329 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    20   6.7  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           20   6.7  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    20   8.9  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    20   8.9  

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 20.2 bits (40), Expect = 6.7
 Identities = 5/7 (71%), Positives = 7/7 (100%)
 Frame = -1

Query: 218 PVLFWLH 198
           PV+FW+H
Sbjct: 123 PVIFWIH 129


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 20.2 bits (40), Expect = 6.7
 Identities = 5/7 (71%), Positives = 7/7 (100%)
 Frame = -1

Query: 218 PVLFWLH 198
           PV+FW+H
Sbjct: 123 PVIFWIH 129


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 19.8 bits (39), Expect = 8.9
 Identities = 5/15 (33%), Positives = 11/15 (73%)
 Frame = +1

Query: 169 INVHYDRAWWWSQKR 213
           ++V +  AW W+++R
Sbjct: 165 LSVFWGSAWQWNEER 179


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 19.8 bits (39), Expect = 8.9
 Identities = 4/6 (66%), Positives = 5/6 (83%)
 Frame = +1

Query: 193 WWWSQK 210
           WWW+ K
Sbjct: 366 WWWNMK 371


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,819
Number of Sequences: 438
Number of extensions: 1260
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7342137
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)