Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0400
         (349 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    23   0.89 
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   3.6  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   4.8  

>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 23.0 bits (47), Expect = 0.89
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = -2

Query: 132 SIFNEKYLNNYKYLHDSVLKNRRIVFS 52
           ++ +E+Y N Y    D+ LK+ R++ S
Sbjct: 14  NVLSEEYTNQYNDELDAALKSERLMKS 40


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.0 bits (42), Expect = 3.6
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -1

Query: 220 INKIIGTKYHIALIFSKYKPIALIWRVVHI 131
           INK    K+    I+   KPI  + R+V I
Sbjct: 47  INKSSTDKFGNGAIYEVLKPIYALMRIVGI 76


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -1

Query: 46  NFIYIVTGIFYL 11
           +FI+IV  IFY+
Sbjct: 244 HFIFIVVSIFYM 255


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,656
Number of Sequences: 336
Number of extensions: 1501
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6876025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)