Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0400
(349 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41991-6|AAA83346.2| 344|Caenorhabditis elegans Seven tm recept... 27 3.7
AF078157-17|AAG24072.1| 1062|Caenorhabditis elegans Hypothetical... 27 4.9
Z78059-1|CAH04725.2| 348|Caenorhabditis elegans Hypothetical pr... 26 6.4
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 26 6.4
Z71266-8|CAA95846.2| 729|Caenorhabditis elegans Hypothetical pr... 26 8.5
Z68299-2|CAA92611.2| 344|Caenorhabditis elegans Hypothetical pr... 26 8.5
U97009-1|AAC69030.2| 339|Caenorhabditis elegans Serpentine rece... 26 8.5
U39851-2|AAF99874.1| 540|Caenorhabditis elegans Hypothetical pr... 26 8.5
AL110479-3|CAB60312.2| 330|Caenorhabditis elegans Hypothetical ... 26 8.5
AF022982-3|AAB69932.1| 670|Caenorhabditis elegans Hypothetical ... 26 8.5
>U41991-6|AAA83346.2| 344|Caenorhabditis elegans Seven tm receptor
protein 44 protein.
Length = 344
Score = 27.1 bits (57), Expect = 3.7
Identities = 23/90 (25%), Positives = 40/90 (44%)
Frame = -1
Query: 274 FLXFLLRSCLLKWNLGILINKIIGTKYHIALIFSKYKPIALIWRVVHIHF*RKISK*L*I 95
F+ L+ + L + I KI GT + LIF+ + W +V F +K L
Sbjct: 16 FVSTLIFNLLFLYLTAFHIKKITGTYKLMVLIFTFIGIVFSAWELVARPFAHNYNKALIY 75
Query: 94 FT*QCSKEQEDCIQYXNFIYIVTGIFYLII 5
F+ + ++ ++ F I+ FYL+I
Sbjct: 76 FS--LNSWLQEYPEFLQFAIILFASFYLVI 103
>AF078157-17|AAG24072.1| 1062|Caenorhabditis elegans Hypothetical
protein F25E5.1 protein.
Length = 1062
Score = 26.6 bits (56), Expect = 4.9
Identities = 10/36 (27%), Positives = 22/36 (61%)
Frame = +1
Query: 241 SRDKIVVETXENRQFIHINEPPIIVQEHDSQPPEKV 348
S++++++ T +R+ + EPP ++ S PEK+
Sbjct: 1003 SKNQMMLITFPSREIVEEEEPPQEAEQSPSPDPEKI 1038
>Z78059-1|CAH04725.2| 348|Caenorhabditis elegans Hypothetical
protein C34B4.5 protein.
Length = 348
Score = 26.2 bits (55), Expect = 6.4
Identities = 20/66 (30%), Positives = 32/66 (48%)
Frame = +2
Query: 32 YVYKVXILNTILLFFRTLSCKYL*LFRYFSLKMDMXNPPNQSYWFVLREDQSNVILSTNN 211
+V + +L+T+ T S + +F + LK P + +WF+L+ S ILST N
Sbjct: 43 FVILLFVLSTVTATLLTASFLIMAVFLWNHLK------PMKFFWFLLQLTISAFILSTLN 96
Query: 212 FVNQNP 229
V P
Sbjct: 97 LVFNVP 102
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 26.2 bits (55), Expect = 6.4
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +2
Query: 110 RYFSLKMDMXNPPNQSYWFVLREDQSN 190
+ FS+ +M PP YW + E +SN
Sbjct: 304 KQFSIPHNMDRPPAPRYWIIDNEVRSN 330
>Z71266-8|CAA95846.2| 729|Caenorhabditis elegans Hypothetical
protein R06C7.9 protein.
Length = 729
Score = 25.8 bits (54), Expect = 8.5
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 329 LSCSCTIIGGSFMWINCL 276
++CSC+I G F I CL
Sbjct: 174 VNCSCSICGSKFSTIRCL 191
>Z68299-2|CAA92611.2| 344|Caenorhabditis elegans Hypothetical
protein T04B2.4 protein.
Length = 344
Score = 25.8 bits (54), Expect = 8.5
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = -3
Query: 311 IIGGSFMWINCLF 273
+IGG F+++NCLF
Sbjct: 205 VIGGVFLFVNCLF 217
>U97009-1|AAC69030.2| 339|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 32 protein.
Length = 339
Score = 25.8 bits (54), Expect = 8.5
Identities = 15/71 (21%), Positives = 33/71 (46%)
Frame = -1
Query: 340 LVVGYHVLVRLSEVHLCG*IVYFLXFLLRSCLLKWNLGILINKIIGTKYHIALIFSKYKP 161
L + Y +V + G +++ + F SCL + + + I Y I + + +
Sbjct: 9 LYISYAAVVSTLGIIFNGFLLFLIFFKSPSCLTPYTVFLANTSITQLGYCICFLLTVPRV 68
Query: 160 IALIWRVVHIH 128
I++ R+V+I+
Sbjct: 69 ISINLRIVNIY 79
>U39851-2|AAF99874.1| 540|Caenorhabditis elegans Hypothetical
protein C23G10.6 protein.
Length = 540
Score = 25.8 bits (54), Expect = 8.5
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -2
Query: 129 IFNEKYLNNYKYLHDSVLKNR 67
++NEKY N KYL D +L+N+
Sbjct: 442 LYNEKYKRNAKYLAD-ILENQ 461
>AL110479-3|CAB60312.2| 330|Caenorhabditis elegans Hypothetical
protein Y105C5B.4 protein.
Length = 330
Score = 25.8 bits (54), Expect = 8.5
Identities = 8/16 (50%), Positives = 14/16 (87%)
Frame = -3
Query: 308 IGGSFMWINCLFSXVS 261
IGGSF+++NCL+ ++
Sbjct: 191 IGGSFLFLNCLYLIIA 206
>AF022982-3|AAB69932.1| 670|Caenorhabditis elegans Hypothetical
protein T23B12.6 protein.
Length = 670
Score = 25.8 bits (54), Expect = 8.5
Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = -1
Query: 316 VRLSEVHLCG*IVYFLXFLLRSCLLKWNLGILINKIIGTKYHIALIFSKYKPIALI-WRV 140
VR+ H+C +V + F+ + +WN +L+ K + +++ I K A + R+
Sbjct: 209 VRMIRAHICSIVVAYSYFVCVYRVTEWNTYVLLWKSPRARTYVSHIAVNTKIAATVAERL 268
Query: 139 VHIHF 125
V + F
Sbjct: 269 VAVSF 273
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,648,234
Number of Sequences: 27780
Number of extensions: 140196
Number of successful extensions: 361
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 354
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 361
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 461821634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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