Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0399
(598 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY119558-1|AAM50212.1| 138|Drosophila melanogaster GM01181p pro... 91 1e-18
AE014134-2589|AAF53452.1| 138|Drosophila melanogaster CG15261-P... 91 1e-18
X14398-1|CAA32571.1| 361|Drosophila melanogaster sodium channel... 30 2.1
X84409-1|CAA59129.1| 133|Drosophila melanogaster sodium channel... 29 3.6
X84408-1|CAA59128.1| 113|Drosophila melanogaster sodium channel... 29 3.6
AE014297-3882|AAF56535.1| 296|Drosophila melanogaster CG14546-P... 29 6.3
AE013599-3978|AAM70798.1| 1618|Drosophila melanogaster CG9071-PA... 29 6.3
AE013599-3977|AAF47291.4| 2327|Drosophila melanogaster CG9071-PB... 29 6.3
BT021411-1|AAX33559.1| 901|Drosophila melanogaster LD05643p pro... 28 8.4
AY119604-1|AAM50258.1| 901|Drosophila melanogaster LD28359p pro... 28 8.4
AE014298-1693|AAF48097.3| 901|Drosophila melanogaster CG1578-PA... 28 8.4
>AY119558-1|AAM50212.1| 138|Drosophila melanogaster GM01181p
protein.
Length = 138
Score = 90.6 bits (215), Expect = 1e-18
Identities = 42/112 (37%), Positives = 74/112 (66%), Gaps = 2/112 (1%)
Frame = +2
Query: 254 ITSPEIYQPVGPYSQAILADKTLYISGILGLDRDA-QMVCGGAEAQTRQALDNLRHVLEA 430
I++ +PV PY+QA++AD+T+Y+SG LGLD+D ++V GG Q ++AL+NL VL+A
Sbjct: 9 ISTANAAKPVAPYNQAVVADRTVYVSGCLGLDKDTMKLVPGGPTEQAQKALENLEAVLKA 68
Query: 431 GGASLESVVKTTVLLASMDDFQTFNKSMQNIF-QSLPCSNDIRXSRLPLEQL 583
+ ++ V+K TV L ++DF N+ + +F + P + + ++LP++ L
Sbjct: 69 ADSGVDKVIKNTVFLKDLNDFGAVNEVYKRVFNKDFPARSCFQVAKLPMDAL 120
>AE014134-2589|AAF53452.1| 138|Drosophila melanogaster CG15261-PA
protein.
Length = 138
Score = 90.6 bits (215), Expect = 1e-18
Identities = 42/112 (37%), Positives = 74/112 (66%), Gaps = 2/112 (1%)
Frame = +2
Query: 254 ITSPEIYQPVGPYSQAILADKTLYISGILGLDRDA-QMVCGGAEAQTRQALDNLRHVLEA 430
I++ +PV PY+QA++AD+T+Y+SG LGLD+D ++V GG Q ++AL+NL VL+A
Sbjct: 9 ISTANAAKPVAPYNQAVVADRTVYVSGCLGLDKDTMKLVPGGPTEQAQKALENLEAVLKA 68
Query: 431 GGASLESVVKTTVLLASMDDFQTFNKSMQNIF-QSLPCSNDIRXSRLPLEQL 583
+ ++ V+K TV L ++DF N+ + +F + P + + ++LP++ L
Sbjct: 69 ADSGVDKVIKNTVFLKDLNDFGAVNEVYKRVFNKDFPARSCFQVAKLPMDAL 120
>X14398-1|CAA32571.1| 361|Drosophila melanogaster sodium channel
protein protein.
Length = 361
Score = 30.3 bits (65), Expect = 2.1
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +2
Query: 434 GASLESVVKTTVLLASMDDFQTFNKSMQNIFQSLPCS--NDIRXS 562
G SL VK L M +FQTF +SMQ +FQ + + ND+ S
Sbjct: 146 GMSLFGNVKLQGALDDMVNFQTFGRSMQLLFQLMTSAGWNDVLES 190
>X84409-1|CAA59129.1| 133|Drosophila melanogaster sodium channel
homologue protein.
Length = 133
Score = 29.5 bits (63), Expect = 3.6
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +2
Query: 434 GASLESVVKTTVLLASMDDFQTFNKSMQNIFQSLPCS--NDIRXSRLP 571
G SL VK L M +FQTF +SMQ +F+ + + ND+ S P
Sbjct: 35 GMSLFGNVKLQGALDDMVNFQTFGRSMQLLFRLMTSAGWNDVLESLPP 82
>X84408-1|CAA59128.1| 113|Drosophila melanogaster sodium channel
homologue protein.
Length = 113
Score = 29.5 bits (63), Expect = 3.6
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +2
Query: 434 GASLESVVKTTVLLASMDDFQTFNKSMQNIFQSLPCS--NDIRXSRLP 571
G SL VK L M +FQTF +SMQ +F+ + + ND+ S P
Sbjct: 35 GMSLFGNVKLQGALDDMVNFQTFGRSMQLLFRLMTSAGWNDVLESLPP 82
>AE014297-3882|AAF56535.1| 296|Drosophila melanogaster CG14546-PA
protein.
Length = 296
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = -3
Query: 452 PTPTKRHQLQVHVADCPEPDGSALQHHRRPSVHLDPIREFQKCIRSCPL 306
P PT+ +Q Q H + S +HR+ ++ P + +R+CP+
Sbjct: 234 PNPTRFNQNQ-HASKVSRSSSSRSSNHRQDNIVCLPAMTYPPYVRNCPI 281
>AE013599-3978|AAM70798.1| 1618|Drosophila melanogaster CG9071-PA,
isoform A protein.
Length = 1618
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +2
Query: 434 GASLESVVKTTVLLASMDDFQTFNKSMQNIFQSLPCS--NDIRXS 562
G SL VK L M +FQTF +SMQ +F+ + + ND+ S
Sbjct: 1364 GMSLFGNVKLQGALDDMVNFQTFGRSMQLLFRLMTSAGWNDVLES 1408
>AE013599-3977|AAF47291.4| 2327|Drosophila melanogaster CG9071-PB,
isoform B protein.
Length = 2327
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +2
Query: 434 GASLESVVKTTVLLASMDDFQTFNKSMQNIFQSLPCS--NDIRXS 562
G SL VK L M +FQTF +SMQ +F+ + + ND+ S
Sbjct: 2073 GMSLFGNVKLQGALDDMVNFQTFGRSMQLLFRLMTSAGWNDVLES 2117
>BT021411-1|AAX33559.1| 901|Drosophila melanogaster LD05643p
protein.
Length = 901
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +2
Query: 281 VGPYSQAILADKTLYISGILGLDRDAQMVC-GGAEAQTRQALDNLRHVLEAGGA 439
+GPYSQ+ YISG + L + + GG Q + L ++ + +A A
Sbjct: 607 IGPYSQSTRIGDITYISGQIALVPGSMTIIEGGIRPQCKLTLRHISRIAKAMNA 660
>AY119604-1|AAM50258.1| 901|Drosophila melanogaster LD28359p
protein.
Length = 901
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +2
Query: 281 VGPYSQAILADKTLYISGILGLDRDAQMVC-GGAEAQTRQALDNLRHVLEAGGA 439
+GPYSQ+ YISG + L + + GG Q + L ++ + +A A
Sbjct: 607 IGPYSQSTRIGDITYISGQIALVPGSMTIIEGGIRPQCKLTLRHISRIAKAMNA 660
>AE014298-1693|AAF48097.3| 901|Drosophila melanogaster CG1578-PA
protein.
Length = 901
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +2
Query: 281 VGPYSQAILADKTLYISGILGLDRDAQMVC-GGAEAQTRQALDNLRHVLEAGGA 439
+GPYSQ+ YISG + L + + GG Q + L ++ + +A A
Sbjct: 607 IGPYSQSTRIGDITYISGQIALVPGSMTIIEGGIRPQCKLTLRHISRIAKAMNA 660
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,953,732
Number of Sequences: 53049
Number of extensions: 553034
Number of successful extensions: 2182
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2180
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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