Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0397
         (349 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X67309-1|CAA47719.1|  249|Homo sapiens ribosomal protein S6 prot...    43   3e-04
M77232-1|AAA60289.1|  249|Homo sapiens ribosomal protein S6 prot...    43   3e-04
M20020-1|AAA60288.1|  249|Homo sapiens RPS6 protein.                   43   3e-04
BC094826-1|AAH94826.1|  249|Homo sapiens ribosomal protein S6 pr...    43   3e-04
BC071908-1|AAH71908.1|  249|Homo sapiens ribosomal protein S6 pr...    43   3e-04
BC071907-1|AAH71907.1|  249|Homo sapiens ribosomal protein S6 pr...    43   3e-04
BC013296-1|AAH13296.1|  249|Homo sapiens ribosomal protein S6 pr...    43   3e-04
BC009427-1|AAH09427.2|  247|Homo sapiens RPS6 protein protein.         43   3e-04
BC000524-1|AAH00524.1|  249|Homo sapiens ribosomal protein S6 pr...    43   3e-04
AL391834-6|CAM21143.1|  249|Homo sapiens ribosomal protein S6 pr...    43   3e-04
AL391834-5|CAM21142.1|  218|Homo sapiens ribosomal protein S6 pr...    43   3e-04
AB062123-1|BAB93455.1|  249|Homo sapiens ribosomal protein S6 pr...    43   3e-04
J03537-1|AAA60287.1|  249|Homo sapiens RPS6 protein.                   42   7e-04
BC027620-1|AAH27620.1|  249|Homo sapiens ribosomal protein S6 pr...    42   7e-04

>X67309-1|CAA47719.1|  249|Homo sapiens ribosomal protein S6
           protein.
          Length = 249

 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 25/51 (49%), Positives = 29/51 (56%)
 Frame = -1

Query: 253 RLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKVRRQEEI 101
           RLVTP VLQ                K   AEYAKLLA+R KE+K +RQE+I
Sbjct: 178 RLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQI 228



 Score = 37.1 bits (82), Expect = 0.015
 Identities = 21/32 (65%), Positives = 25/32 (78%)
 Frame = -2

Query: 348 EDDVRRYVVKRVLPAKEGKENAKPRHKAPKIR 253
           EDDVR+YVV++ L  KEGK   KPR KAPKI+
Sbjct: 150 EDDVRQYVVRKPL-NKEGK---KPRTKAPKIQ 177


>M77232-1|AAA60289.1|  249|Homo sapiens ribosomal protein S6
           protein.
          Length = 249

 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 25/51 (49%), Positives = 29/51 (56%)
 Frame = -1

Query: 253 RLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKVRRQEEI 101
           RLVTP VLQ                K   AEYAKLLA+R KE+K +RQE+I
Sbjct: 178 RLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQI 228



 Score = 37.1 bits (82), Expect = 0.015
 Identities = 21/32 (65%), Positives = 25/32 (78%)
 Frame = -2

Query: 348 EDDVRRYVVKRVLPAKEGKENAKPRHKAPKIR 253
           EDDVR+YVV++ L  KEGK   KPR KAPKI+
Sbjct: 150 EDDVRQYVVRKPL-NKEGK---KPRTKAPKIQ 177


>M20020-1|AAA60288.1|  249|Homo sapiens RPS6 protein.
          Length = 249

 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 25/51 (49%), Positives = 29/51 (56%)
 Frame = -1

Query: 253 RLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKVRRQEEI 101
           RLVTP VLQ                K   AEYAKLLA+R KE+K +RQE+I
Sbjct: 178 RLVTPRVLQHKRRRIALKQQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQI 228



 Score = 37.1 bits (82), Expect = 0.015
 Identities = 21/32 (65%), Positives = 25/32 (78%)
 Frame = -2

Query: 348 EDDVRRYVVKRVLPAKEGKENAKPRHKAPKIR 253
           EDDVR+YVV++ L  KEGK   KPR KAPKI+
Sbjct: 150 EDDVRQYVVRKPL-NKEGK---KPRTKAPKIQ 177


>BC094826-1|AAH94826.1|  249|Homo sapiens ribosomal protein S6
           protein.
          Length = 249

 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 25/51 (49%), Positives = 29/51 (56%)
 Frame = -1

Query: 253 RLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKVRRQEEI 101
           RLVTP VLQ                K   AEYAKLLA+R KE+K +RQE+I
Sbjct: 178 RLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQI 228



 Score = 37.1 bits (82), Expect = 0.015
 Identities = 21/32 (65%), Positives = 25/32 (78%)
 Frame = -2

Query: 348 EDDVRRYVVKRVLPAKEGKENAKPRHKAPKIR 253
           EDDVR+YVV++ L  KEGK   KPR KAPKI+
Sbjct: 150 EDDVRQYVVRKPL-NKEGK---KPRTKAPKIQ 177


>BC071908-1|AAH71908.1|  249|Homo sapiens ribosomal protein S6
           protein.
          Length = 249

 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 25/51 (49%), Positives = 29/51 (56%)
 Frame = -1

Query: 253 RLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKVRRQEEI 101
           RLVTP VLQ                K   AEYAKLLA+R KE+K +RQE+I
Sbjct: 178 RLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQI 228



 Score = 37.1 bits (82), Expect = 0.015
 Identities = 21/32 (65%), Positives = 25/32 (78%)
 Frame = -2

Query: 348 EDDVRRYVVKRVLPAKEGKENAKPRHKAPKIR 253
           EDDVR+YVV++ L  KEGK   KPR KAPKI+
Sbjct: 150 EDDVRQYVVRKPL-NKEGK---KPRTKAPKIQ 177


>BC071907-1|AAH71907.1|  249|Homo sapiens ribosomal protein S6
           protein.
          Length = 249

 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 25/51 (49%), Positives = 29/51 (56%)
 Frame = -1

Query: 253 RLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKVRRQEEI 101
           RLVTP VLQ                K   AEYAKLLA+R KE+K +RQE+I
Sbjct: 178 RLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQI 228



 Score = 37.1 bits (82), Expect = 0.015
 Identities = 21/32 (65%), Positives = 25/32 (78%)
 Frame = -2

Query: 348 EDDVRRYVVKRVLPAKEGKENAKPRHKAPKIR 253
           EDDVR+YVV++ L  KEGK   KPR KAPKI+
Sbjct: 150 EDDVRQYVVRKPL-NKEGK---KPRTKAPKIQ 177


>BC013296-1|AAH13296.1|  249|Homo sapiens ribosomal protein S6
           protein.
          Length = 249

 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 25/51 (49%), Positives = 29/51 (56%)
 Frame = -1

Query: 253 RLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKVRRQEEI 101
           RLVTP VLQ                K   AEYAKLLA+R KE+K +RQE+I
Sbjct: 178 RLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQI 228



 Score = 35.9 bits (79), Expect = 0.035
 Identities = 20/32 (62%), Positives = 25/32 (78%)
 Frame = -2

Query: 348 EDDVRRYVVKRVLPAKEGKENAKPRHKAPKIR 253
           EDDVR+YVV++ L  KEGK   KPR +APKI+
Sbjct: 150 EDDVRQYVVRKPL-NKEGK---KPRTRAPKIQ 177


>BC009427-1|AAH09427.2|  247|Homo sapiens RPS6 protein protein.
          Length = 247

 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 25/51 (49%), Positives = 29/51 (56%)
 Frame = -1

Query: 253 RLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKVRRQEEI 101
           RLVTP VLQ                K   AEYAKLLA+R KE+K +RQE+I
Sbjct: 176 RLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQI 226



 Score = 37.1 bits (82), Expect = 0.015
 Identities = 21/32 (65%), Positives = 25/32 (78%)
 Frame = -2

Query: 348 EDDVRRYVVKRVLPAKEGKENAKPRHKAPKIR 253
           EDDVR+YVV++ L  KEGK   KPR KAPKI+
Sbjct: 148 EDDVRQYVVRKPL-NKEGK---KPRTKAPKIQ 175


>BC000524-1|AAH00524.1|  249|Homo sapiens ribosomal protein S6
           protein.
          Length = 249

 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 25/51 (49%), Positives = 29/51 (56%)
 Frame = -1

Query: 253 RLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKVRRQEEI 101
           RLVTP VLQ                K   AEYAKLLA+R KE+K +RQE+I
Sbjct: 178 RLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQI 228



 Score = 37.1 bits (82), Expect = 0.015
 Identities = 21/32 (65%), Positives = 25/32 (78%)
 Frame = -2

Query: 348 EDDVRRYVVKRVLPAKEGKENAKPRHKAPKIR 253
           EDDVR+YVV++ L  KEGK   KPR KAPKI+
Sbjct: 150 EDDVRQYVVRKPL-NKEGK---KPRTKAPKIQ 177


>AL391834-6|CAM21143.1|  249|Homo sapiens ribosomal protein S6
           protein.
          Length = 249

 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 25/51 (49%), Positives = 29/51 (56%)
 Frame = -1

Query: 253 RLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKVRRQEEI 101
           RLVTP VLQ                K   AEYAKLLA+R KE+K +RQE+I
Sbjct: 178 RLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQI 228



 Score = 37.1 bits (82), Expect = 0.015
 Identities = 21/32 (65%), Positives = 25/32 (78%)
 Frame = -2

Query: 348 EDDVRRYVVKRVLPAKEGKENAKPRHKAPKIR 253
           EDDVR+YVV++ L  KEGK   KPR KAPKI+
Sbjct: 150 EDDVRQYVVRKPL-NKEGK---KPRTKAPKIQ 177


>AL391834-5|CAM21142.1|  218|Homo sapiens ribosomal protein S6
           protein.
          Length = 218

 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 25/51 (49%), Positives = 29/51 (56%)
 Frame = -1

Query: 253 RLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKVRRQEEI 101
           RLVTP VLQ                K   AEYAKLLA+R KE+K +RQE+I
Sbjct: 147 RLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQI 197



 Score = 37.1 bits (82), Expect = 0.015
 Identities = 21/32 (65%), Positives = 25/32 (78%)
 Frame = -2

Query: 348 EDDVRRYVVKRVLPAKEGKENAKPRHKAPKIR 253
           EDDVR+YVV++ L  KEGK   KPR KAPKI+
Sbjct: 119 EDDVRQYVVRKPL-NKEGK---KPRTKAPKIQ 146


>AB062123-1|BAB93455.1|  249|Homo sapiens ribosomal protein S6
           protein.
          Length = 249

 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 25/51 (49%), Positives = 29/51 (56%)
 Frame = -1

Query: 253 RLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKVRRQEEI 101
           RLVTP VLQ                K   AEYAKLLA+R KE+K +RQE+I
Sbjct: 178 RLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQI 228



 Score = 37.1 bits (82), Expect = 0.015
 Identities = 21/32 (65%), Positives = 25/32 (78%)
 Frame = -2

Query: 348 EDDVRRYVVKRVLPAKEGKENAKPRHKAPKIR 253
           EDDVR+YVV++ L  KEGK   KPR KAPKI+
Sbjct: 150 EDDVRQYVVRKPL-NKEGK---KPRTKAPKIQ 177


>J03537-1|AAA60287.1|  249|Homo sapiens RPS6 protein.
          Length = 249

 Score = 41.5 bits (93), Expect = 7e-04
 Identities = 24/51 (47%), Positives = 29/51 (56%)
 Frame = -1

Query: 253 RLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKVRRQEEI 101
           RLVTP VLQ                K   AEYAKLLA+R K++K +RQE+I
Sbjct: 178 RLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKQAKEKRQEQI 228



 Score = 31.9 bits (69), Expect = 0.57
 Identities = 19/32 (59%), Positives = 23/32 (71%)
 Frame = -2

Query: 348 EDDVRRYVVKRVLPAKEGKENAKPRHKAPKIR 253
           EDDVR  VV++ L  KEGK   +PR KAPKI+
Sbjct: 150 EDDVRECVVRKPLN-KEGK---RPRTKAPKIQ 177


>BC027620-1|AAH27620.1|  249|Homo sapiens ribosomal protein S6
           protein.
          Length = 249

 Score = 41.5 bits (93), Expect = 7e-04
 Identities = 24/51 (47%), Positives = 29/51 (56%)
 Frame = -1

Query: 253 RLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKVRRQEEI 101
           RLVTP VLQ                K   AEYAKLLA+R KE++ +RQE+I
Sbjct: 178 RLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAREKRQEQI 228



 Score = 37.1 bits (82), Expect = 0.015
 Identities = 21/32 (65%), Positives = 25/32 (78%)
 Frame = -2

Query: 348 EDDVRRYVVKRVLPAKEGKENAKPRHKAPKIR 253
           EDDVR+YVV++ L  KEGK   KPR KAPKI+
Sbjct: 150 EDDVRQYVVRKPL-NKEGK---KPRTKAPKIQ 177


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,276,022
Number of Sequences: 237096
Number of extensions: 622938
Number of successful extensions: 1495
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1482
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2026198370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)