Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0397
(349 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L07881-1|AAA28871.1| 248|Drosophila melanogaster ribosomal prot... 46 2e-05
L02075-1|AAB05985.1| 248|Drosophila melanogaster ribosomal prot... 46 2e-05
L02074-4|AAB05982.1| 248|Drosophila melanogaster ribosomal prot... 46 2e-05
L01658-1|AAC34306.1| 248|Drosophila melanogaster ribosomal prot... 46 2e-05
AY058620-1|AAL13849.1| 217|Drosophila melanogaster LD31286p pro... 46 2e-05
AE014298-1080|AAF46288.1| 217|Drosophila melanogaster CG10944-P... 46 2e-05
AE014298-1079|AAN09219.1| 251|Drosophila melanogaster CG10944-P... 46 2e-05
AE014298-1078|AAN09218.1| 248|Drosophila melanogaster CG10944-P... 46 2e-05
L02074-3|AAB05984.1| 200|Drosophila melanogaster protein ( Dros... 30 0.93
L02074-2|AAB05983.1| 200|Drosophila melanogaster protein ( Dros... 30 0.93
BT022735-1|AAY55151.1| 149|Drosophila melanogaster IP07614p pro... 30 0.93
BT022511-1|AAY54927.1| 147|Drosophila melanogaster IP07914p pro... 30 0.93
AE014298-1077|AAS65274.1| 135|Drosophila melanogaster CG33222-P... 30 0.93
AE014298-1076|AAF46287.3| 135|Drosophila melanogaster CG11386-P... 30 0.93
>L07881-1|AAA28871.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 45.6 bits (103), Expect = 2e-05
Identities = 24/49 (48%), Positives = 29/49 (59%)
Frame = -1
Query: 253 RLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKVRRQE 107
RL+TPVVLQ K + A+YAKLL QRKKESK +R+E
Sbjct: 179 RLITPVVLQRKHRRIALKKKRQIASKEASADYAKLLVQRKKESKAKREE 227
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = -2
Query: 348 EDDVRRYVVKRVLPAKEGKENAKPRHKAPKIR 253
EDDVRR+VV+R LPA K+N K KAPKI+
Sbjct: 150 EDDVRRFVVRRPLPA---KDNKKATSKAPKIQ 178
>L02075-1|AAB05985.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 45.6 bits (103), Expect = 2e-05
Identities = 24/49 (48%), Positives = 29/49 (59%)
Frame = -1
Query: 253 RLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKVRRQE 107
RL+TPVVLQ K + A+YAKLL QRKKESK +R+E
Sbjct: 179 RLITPVVLQRKHRRIALKKKRQIASKEASADYAKLLVQRKKESKAKREE 227
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = -2
Query: 348 EDDVRRYVVKRVLPAKEGKENAKPRHKAPKIR 253
EDDVRR+VV+R LPA K+N K KAPKI+
Sbjct: 150 EDDVRRFVVRRPLPA---KDNKKATSKAPKIQ 178
>L02074-4|AAB05982.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 45.6 bits (103), Expect = 2e-05
Identities = 24/49 (48%), Positives = 29/49 (59%)
Frame = -1
Query: 253 RLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKVRRQE 107
RL+TPVVLQ K + A+YAKLL QRKKESK +R+E
Sbjct: 179 RLITPVVLQRKHRRIALKKKRQIASKEASADYAKLLVQRKKESKAKREE 227
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = -2
Query: 348 EDDVRRYVVKRVLPAKEGKENAKPRHKAPKIR 253
EDDVRR+VV+R LPA K+N K KAPKI+
Sbjct: 150 EDDVRRFVVRRPLPA---KDNKKATSKAPKIQ 178
>L01658-1|AAC34306.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 45.6 bits (103), Expect = 2e-05
Identities = 24/49 (48%), Positives = 29/49 (59%)
Frame = -1
Query: 253 RLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKVRRQE 107
RL+TPVVLQ K + A+YAKLL QRKKESK +R+E
Sbjct: 179 RLITPVVLQRKHRRIALKKKRQIASKEASADYAKLLVQRKKESKAKREE 227
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = -2
Query: 348 EDDVRRYVVKRVLPAKEGKENAKPRHKAPKIR 253
EDDVRR+VV+R LPA K+N K KAPKI+
Sbjct: 150 EDDVRRFVVRRPLPA---KDNKKATSKAPKIQ 178
>AY058620-1|AAL13849.1| 217|Drosophila melanogaster LD31286p
protein.
Length = 217
Score = 45.6 bits (103), Expect = 2e-05
Identities = 24/49 (48%), Positives = 29/49 (59%)
Frame = -1
Query: 253 RLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKVRRQE 107
RL+TPVVLQ K + A+YAKLL QRKKESK +R+E
Sbjct: 148 RLITPVVLQRKHRRIALKKKRQIASKEASADYAKLLVQRKKESKAKREE 196
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = -2
Query: 348 EDDVRRYVVKRVLPAKEGKENAKPRHKAPKIR 253
EDDVRR+VV+R LPA K+N K KAPKI+
Sbjct: 119 EDDVRRFVVRRPLPA---KDNKKATSKAPKIQ 147
>AE014298-1080|AAF46288.1| 217|Drosophila melanogaster CG10944-PA,
isoform A protein.
Length = 217
Score = 45.6 bits (103), Expect = 2e-05
Identities = 24/49 (48%), Positives = 29/49 (59%)
Frame = -1
Query: 253 RLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKVRRQE 107
RL+TPVVLQ K + A+YAKLL QRKKESK +R+E
Sbjct: 148 RLITPVVLQRKHRRIALKKKRQIASKEASADYAKLLVQRKKESKAKREE 196
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = -2
Query: 348 EDDVRRYVVKRVLPAKEGKENAKPRHKAPKIR 253
EDDVRR+VV+R LPA K+N K KAPKI+
Sbjct: 119 EDDVRRFVVRRPLPA---KDNKKATSKAPKIQ 147
>AE014298-1079|AAN09219.1| 251|Drosophila melanogaster CG10944-PC,
isoform C protein.
Length = 251
Score = 45.6 bits (103), Expect = 2e-05
Identities = 24/49 (48%), Positives = 29/49 (59%)
Frame = -1
Query: 253 RLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKVRRQE 107
RL+TPVVLQ K + A+YAKLL QRKKESK +R+E
Sbjct: 182 RLITPVVLQRKHRRIALKKKRQIASKEASADYAKLLVQRKKESKAKREE 230
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = -2
Query: 348 EDDVRRYVVKRVLPAKEGKENAKPRHKAPKIR 253
EDDVRR+VV+R LPA K+N K KAPKI+
Sbjct: 153 EDDVRRFVVRRPLPA---KDNKKATSKAPKIQ 181
>AE014298-1078|AAN09218.1| 248|Drosophila melanogaster CG10944-PB,
isoform B protein.
Length = 248
Score = 45.6 bits (103), Expect = 2e-05
Identities = 24/49 (48%), Positives = 29/49 (59%)
Frame = -1
Query: 253 RLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKVRRQE 107
RL+TPVVLQ K + A+YAKLL QRKKESK +R+E
Sbjct: 179 RLITPVVLQRKHRRIALKKKRQIASKEASADYAKLLVQRKKESKAKREE 227
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = -2
Query: 348 EDDVRRYVVKRVLPAKEGKENAKPRHKAPKIR 253
EDDVRR+VV+R LPA K+N K KAPKI+
Sbjct: 150 EDDVRRFVVRRPLPA---KDNKKATSKAPKIQ 178
>L02074-3|AAB05984.1| 200|Drosophila melanogaster protein (
Drosophila melanogasterribosomal protein S6 gene and two
potential alternativelyspliced proteins, complete cds.
).
Length = 200
Score = 29.9 bits (64), Expect = 0.93
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1
Query: 166 AEYAKLLAQRKKESKVRR 113
AEY KLL +RKKESK R
Sbjct: 165 AEYVKLLVKRKKESKANR 182
>L02074-2|AAB05983.1| 200|Drosophila melanogaster protein (
Drosophila melanogasterribosomal protein S6 gene and two
potential alternativelyspliced proteins, complete cds.
).
Length = 200
Score = 29.9 bits (64), Expect = 0.93
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1
Query: 166 AEYAKLLAQRKKESKVRR 113
AEY KLL +RKKESK R
Sbjct: 165 AEYVKLLVKRKKESKANR 182
>BT022735-1|AAY55151.1| 149|Drosophila melanogaster IP07614p
protein.
Length = 149
Score = 29.9 bits (64), Expect = 0.93
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1
Query: 166 AEYAKLLAQRKKESKVRR 113
AEY KLL +RKKESK R
Sbjct: 114 AEYVKLLVKRKKESKANR 131
>BT022511-1|AAY54927.1| 147|Drosophila melanogaster IP07914p
protein.
Length = 147
Score = 29.9 bits (64), Expect = 0.93
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1
Query: 166 AEYAKLLAQRKKESKVRR 113
AEY KLL +RKKESK R
Sbjct: 112 AEYVKLLVKRKKESKANR 129
>AE014298-1077|AAS65274.1| 135|Drosophila melanogaster CG33222-PA
protein.
Length = 135
Score = 29.9 bits (64), Expect = 0.93
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1
Query: 166 AEYAKLLAQRKKESKVRR 113
AEY KLL +RKKESK R
Sbjct: 100 AEYVKLLVKRKKESKANR 117
>AE014298-1076|AAF46287.3| 135|Drosophila melanogaster CG11386-PA
protein.
Length = 135
Score = 29.9 bits (64), Expect = 0.93
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1
Query: 166 AEYAKLLAQRKKESKVRR 113
AEY KLL +RKKESK R
Sbjct: 100 AEYVKLLVKRKKESKANR 117
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,011,368
Number of Sequences: 53049
Number of extensions: 169140
Number of successful extensions: 446
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 426
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 438
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 817309116
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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