Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0395
         (289 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.21 
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   2.0  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   2.6  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   2.6  
EF532798-1|ABQ08060.1|   50|Tribolium castaneum acetylcholineste...    21   3.5  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   3.5  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    20   6.1  
AM269505-1|CAK30048.1|   10|Tribolium castaneum mlpt peptide 1 p...    19   8.0  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.6 bits (51), Expect = 0.21
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +3

Query: 105  NQIGAKFWEIISDEHGIDPTGAYHGDSXLQLERINVYYNEA 227
            N+I  + W +  D  G     AYHGD  +  E I    ++A
Sbjct: 911  NRIRNQRWIVNRDTSGATGPFAYHGDQWVGFEDIKSVRDKA 951


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 2.0
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +2

Query: 137 LRRARHRPHRCLPWGLXLAVGAHQCILQ*SLRRQVR 244
           L   R   ++ LP+GL  AVG+    +   L  +VR
Sbjct: 416 LYNGRSYTYQVLPFGLKTAVGSFSRAMDVVLGTEVR 451


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 2.6
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 108 GCRIDQLGYVRFPSFCFIYVNYKL 37
           GC I Q   + F SFC+ Y N K+
Sbjct: 260 GCLI-QFNTIVF-SFCYCYYNSKM 281


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 2.6
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 240 YVPRASSSTWSPA 278
           Y   A+SS WSPA
Sbjct: 210 YTNSANSSIWSPA 222


>EF532798-1|ABQ08060.1|   50|Tribolium castaneum
           acetylcholinesterase protein.
          Length = 50

 Score = 20.6 bits (41), Expect = 3.5
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 256 PRRLGARHHG 285
           P+RL  RHHG
Sbjct: 21  PQRLRIRHHG 30


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 20.6 bits (41), Expect = 3.5
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +3

Query: 39  IYSSHK*NKMREIVHIQAGQCGNQIGAKFWEI 134
           I +  + N+++  V I    C N   A+F+E+
Sbjct: 283 IEAKRRDNEIKMFVKIVDASCRNFTAARFFEL 314


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 19.8 bits (39), Expect = 6.1
 Identities = 7/16 (43%), Positives = 7/16 (43%)
 Frame = -1

Query: 193 CKXESPW*APVGSMPC 146
           C  E PW    G  PC
Sbjct: 351 CVNERPWSLYCGEPPC 366


>AM269505-1|CAK30048.1|   10|Tribolium castaneum mlpt peptide 1
           protein.
          Length = 10

 Score = 19.4 bits (38), Expect = 8.0
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +3

Query: 150 GIDPTGAY 173
           G+DPTG Y
Sbjct: 3   GLDPTGLY 10


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,810
Number of Sequences: 336
Number of extensions: 1177
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  5003479
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)