Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0395
(289 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 123 3e-29
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 122 4e-29
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 121 8e-29
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 118 8e-28
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 118 8e-28
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 116 4e-27
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 114 9e-27
03_01_0034 + 318432-318825,318902-319851 114 1e-26
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 60 4e-10
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 59 7e-10
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 56 3e-09
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 50 2e-07
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 43 5e-05
07_01_1133 - 10550799-10551137,10552195-10552254,10555693-105574... 31 0.20
11_04_0054 - 12895574-12895840,12906985-12908121,12908274-12908591 30 0.26
04_04_0178 - 23337801-23337896,23337999-23338067,23338171-233382... 29 0.80
02_04_0648 - 24716249-24717841 28 1.1
12_02_0931 + 24512496-24512567,24512705-24512806,24512939-245129... 27 1.8
03_02_0319 - 7421357-7421757,7421768-7421843,7424695-7424796,742... 27 1.8
06_01_0435 + 3092910-3093392,3093938-3094196,3094636-3094979 27 3.2
11_04_0158 + 14207463-14207629,14207724-14207774,14207874-142080... 26 5.6
08_01_0243 + 2011891-2012403 26 5.6
01_01_0285 - 2360799-2362631 26 5.6
09_04_0032 - 13953323-13955269 25 7.4
05_05_0134 + 22619297-22619801,22619879-22621960,22622067-22623718 25 7.4
02_04_0021 + 18975992-18976408 25 7.4
11_01_0047 + 358370-360107,360713-361353 25 9.8
10_08_0683 - 19860777-19861070,19861677-19861874,19862498-198626... 25 9.8
10_02_0174 - 6202334-6204922 25 9.8
07_03_1416 - 26415330-26417153 25 9.8
07_03_1206 + 24878301-24879308 25 9.8
05_06_0110 + 25632514-25632834,25633200-25634039 25 9.8
04_01_0541 - 6998030-6998521,7000666-7000732,7001057-7001202 25 9.8
02_02_0354 + 9283886-9285505,9287158-9287251,9287817-9289915 25 9.8
02_01_0417 - 3048519-3048710,3048903-3050600,3050622-3050909,305... 25 9.8
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 123 bits (296), Expect = 3e-29
Identities = 54/63 (85%), Positives = 57/63 (90%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXLQLERINVYYNEASGGKYV 245
MREI+HIQ GQCGNQIGAKFWE+I DEHGID TG Y GDS LQLERINVYYNEASGG+YV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYV 60
Query: 246 PRA 254
PRA
Sbjct: 61 PRA 63
Score = 26.2 bits (55), Expect = 4.2
Identities = 12/15 (80%), Positives = 14/15 (93%), Gaps = 1/15 (6%)
Frame = +2
Query: 248 PR-LLVDLEPGTMDS 289
PR +L+DLEPGTMDS
Sbjct: 61 PRAVLMDLEPGTMDS 75
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 122 bits (295), Expect = 4e-29
Identities = 53/63 (84%), Positives = 57/63 (90%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXLQLERINVYYNEASGGKYV 245
MREI+HIQ GQCGNQIGAKFWE+I DEHG+D TG Y GDS LQLERINVYYNEASGG+YV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQLERINVYYNEASGGRYV 60
Query: 246 PRA 254
PRA
Sbjct: 61 PRA 63
Score = 26.2 bits (55), Expect = 4.2
Identities = 12/15 (80%), Positives = 14/15 (93%), Gaps = 1/15 (6%)
Frame = +2
Query: 248 PR-LLVDLEPGTMDS 289
PR +L+DLEPGTMDS
Sbjct: 61 PRAVLMDLEPGTMDS 75
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 121 bits (292), Expect = 8e-29
Identities = 53/63 (84%), Positives = 57/63 (90%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXLQLERINVYYNEASGGKYV 245
MREI+HIQ GQCGNQIGAKFWE+I DEHGID TG Y GDS LQLERINVYYNEASGG++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRFV 60
Query: 246 PRA 254
PRA
Sbjct: 61 PRA 63
Score = 26.2 bits (55), Expect = 4.2
Identities = 12/15 (80%), Positives = 14/15 (93%), Gaps = 1/15 (6%)
Frame = +2
Query: 248 PR-LLVDLEPGTMDS 289
PR +L+DLEPGTMDS
Sbjct: 61 PRAVLMDLEPGTMDS 75
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 118 bits (284), Expect = 8e-28
Identities = 50/64 (78%), Positives = 57/64 (89%)
Frame = +3
Query: 63 KMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXLQLERINVYYNEASGGKY 242
KMREI+HIQ GQCGNQIG+KFWE++ DEHGIDPTG Y G S LQLER+NVYYNEAS G++
Sbjct: 180 KMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQLERVNVYYNEASCGRF 239
Query: 243 VPRA 254
VPRA
Sbjct: 240 VPRA 243
Score = 26.2 bits (55), Expect = 4.2
Identities = 12/15 (80%), Positives = 14/15 (93%), Gaps = 1/15 (6%)
Frame = +2
Query: 248 PR-LLVDLEPGTMDS 289
PR +L+DLEPGTMDS
Sbjct: 241 PRAVLMDLEPGTMDS 255
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 118 bits (284), Expect = 8e-28
Identities = 50/63 (79%), Positives = 57/63 (90%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXLQLERINVYYNEASGGKYV 245
MREI+HIQ GQCGNQIGAKFWE++ DEHGIDPTG Y G+S LQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQLERVNVYYNEASCGRFV 60
Query: 246 PRA 254
PRA
Sbjct: 61 PRA 63
Score = 26.2 bits (55), Expect = 4.2
Identities = 12/15 (80%), Positives = 14/15 (93%), Gaps = 1/15 (6%)
Frame = +2
Query: 248 PR-LLVDLEPGTMDS 289
PR +L+DLEPGTMDS
Sbjct: 61 PRAVLMDLEPGTMDS 75
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 116 bits (278), Expect = 4e-27
Identities = 49/63 (77%), Positives = 56/63 (88%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXLQLERINVYYNEASGGKYV 245
MREI+HIQ GQCGNQIG+KFWE++ DEHGIDPTG Y G S LQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERVNVYYNEASCGRFV 60
Query: 246 PRA 254
PRA
Sbjct: 61 PRA 63
Score = 26.2 bits (55), Expect = 4.2
Identities = 12/15 (80%), Positives = 14/15 (93%), Gaps = 1/15 (6%)
Frame = +2
Query: 248 PR-LLVDLEPGTMDS 289
PR +L+DLEPGTMDS
Sbjct: 61 PRAVLMDLEPGTMDS 75
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 114 bits (275), Expect = 9e-27
Identities = 49/63 (77%), Positives = 55/63 (87%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXLQLERINVYYNEASGGKYV 245
MREI+HIQ GQCGNQIGAKFWE+I EHG+DPTG Y G S QLERINVY+NEASGG++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYTGTSPQQLERINVYFNEASGGRHV 60
Query: 246 PRA 254
PRA
Sbjct: 61 PRA 63
Score = 26.2 bits (55), Expect = 4.2
Identities = 12/15 (80%), Positives = 14/15 (93%), Gaps = 1/15 (6%)
Frame = +2
Query: 248 PR-LLVDLEPGTMDS 289
PR +L+DLEPGTMDS
Sbjct: 61 PRAVLMDLEPGTMDS 75
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 114 bits (274), Expect = 1e-26
Identities = 49/63 (77%), Positives = 55/63 (87%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXLQLERINVYYNEASGGKYV 245
MREI+HIQ GQCGNQIGAKFWE++ EHGID TG Y GDS LQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDLQLERVNVYYNEASCGRFV 60
Query: 246 PRA 254
PRA
Sbjct: 61 PRA 63
Score = 26.2 bits (55), Expect = 4.2
Identities = 12/15 (80%), Positives = 14/15 (93%), Gaps = 1/15 (6%)
Frame = +2
Query: 248 PR-LLVDLEPGTMDS 289
PR +L+DLEPGTMDS
Sbjct: 61 PRAVLMDLEPGTMDS 75
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 59.7 bits (138), Expect = 4e-10
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXLQL--ERINVYYNEASGGK 239
MREI+ I GQ G Q+G WE+ EHGI+P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 240 YVPRA 254
+VPRA
Sbjct: 61 HVPRA 65
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 58.8 bits (136), Expect = 7e-10
Identities = 27/62 (43%), Positives = 38/62 (61%)
Frame = +3
Query: 69 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXLQLERINVYYNEASGGKYVP 248
REI+ IQ GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 249 RA 254
RA
Sbjct: 63 RA 64
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 56.4 bits (130), Expect = 3e-09
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXL--QLERINVYYNEASGGK 239
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 240 YVPRA 254
+VPRA
Sbjct: 61 HVPRA 65
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 50.4 bits (115), Expect = 2e-07
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXL--QLERINVYYNEASGGK 239
MRE + I GQ G Q+G WE+ EHGI G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAGK 60
Query: 240 YVPRA 254
+VPRA
Sbjct: 61 HVPRA 65
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 42.7 bits (96), Expect = 5e-05
Identities = 19/40 (47%), Positives = 23/40 (57%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS 185
MREI+ I GQ G Q+G WE+ EHGI P G D+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPRDA 40
Score = 26.6 bits (56), Expect = 3.2
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +3
Query: 198 ERINVYYNEASGGKYVPRA 254
+ N +++E S GK+VPRA
Sbjct: 107 DAFNTFFSETSSGKHVPRA 125
>07_01_1133 -
10550799-10551137,10552195-10552254,10555693-10557401,
10557534-10557616,10577533-10578074
Length = 910
Score = 30.7 bits (66), Expect = 0.20
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +3
Query: 102 GNQIGAKFWEIISDEHG--IDPTGAYHGDSXLQLERIN 209
G+Q +KFW+ + +E G ++ + AYH + Q ER+N
Sbjct: 540 GSQFTSKFWQKLQEEMGTHLNFSTAYHPQTDGQTERVN 577
>11_04_0054 - 12895574-12895840,12906985-12908121,12908274-12908591
Length = 573
Score = 30.3 bits (65), Expect = 0.26
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +3
Query: 102 GNQIGAKFWEIISDEHG--IDPTGAYHGDSXLQLERIN 209
G+Q +KFW+ + +E G ++ + AYH + Q ER+N
Sbjct: 331 GSQFTSKFWQKLQEELGTRLNFSTAYHPQTDGQTERVN 368
>04_04_0178 -
23337801-23337896,23337999-23338067,23338171-23338253,
23338694-23338772,23338956-23339120,23339230-23339274,
23339370-23339444,23340135-23340311,23340398-23340721,
23340829-23340897
Length = 393
Score = 28.7 bits (61), Expect = 0.80
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = -3
Query: 257 GGAGHVLAAGGFIVVYIDALQLQVRVPMVGTGGVDAVLVGDDL 129
G G +A G IVV L + V GV AVLVG+ L
Sbjct: 327 GERGQTIAQKGIIVVGESGLFTPDHISFVQNAGVKAVLVGESL 369
>02_04_0648 - 24716249-24717841
Length = 530
Score = 28.3 bits (60), Expect = 1.1
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +3
Query: 114 GAKFWEIISDEHGIDPTGAYHG 179
G +++E++ DEHGI+P ++G
Sbjct: 366 GLRYFELMCDEHGIEPEIEHYG 387
>12_02_0931 +
24512496-24512567,24512705-24512806,24512939-24512984,
24513292-24513355,24513997-24514348,24514497-24514749,
24515069-24515311,24515399-24515518,24515710-24516158
Length = 566
Score = 27.5 bits (58), Expect = 1.8
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGI 155
MRE V +Q G N +G+ FW + G+
Sbjct: 1 MREAVTVQVGGFANYVGSHFWNFQDELLGL 30
>03_02_0319 -
7421357-7421757,7421768-7421843,7424695-7424796,
7424911-7424982
Length = 216
Score = 27.5 bits (58), Expect = 1.8
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGI 155
MRE V +Q G N +G+ FW + G+
Sbjct: 1 MREAVTVQVGGFANYVGSHFWNFQDELLGL 30
>06_01_0435 + 3092910-3093392,3093938-3094196,3094636-3094979
Length = 361
Score = 26.6 bits (56), Expect = 3.2
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -1
Query: 289 RVHGAGLQVDEEARGTYLPP 230
RVHG L DE+ RG L P
Sbjct: 15 RVHGTYLHADEDGRGVSLQP 34
>11_04_0158 +
14207463-14207629,14207724-14207774,14207874-14208002,
14209342-14209447,14209491-14209601,14210042-14210098,
14210903-14211727
Length = 481
Score = 25.8 bits (54), Expect = 5.6
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 181 TLTCSWSASMYTTMKPPAASTCPAPPRR 264
TL S+S +T +AST PAPP++
Sbjct: 430 TLPARMSSSTTSTSPSVSASTAPAPPQQ 457
>08_01_0243 + 2011891-2012403
Length = 170
Score = 25.8 bits (54), Expect = 5.6
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = -3
Query: 269 PSRRGGAGHVLAAGGFIVVYIDALQLQVRVPMVGTGGVDAVLVGDDL 129
PS GAG V+ AGG I L + + ++ G A G D+
Sbjct: 17 PSSSSGAGAVVVAGGGAAQQIILLHRTLHMELLKEAGEMAAACGGDV 63
>01_01_0285 - 2360799-2362631
Length = 610
Score = 25.8 bits (54), Expect = 5.6
Identities = 10/44 (22%), Positives = 20/44 (45%)
Frame = +3
Query: 69 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXLQLE 200
R + H G + W +++ H +DP + G+S L ++
Sbjct: 525 RAVAHATRMATGGEFITILWALLTHAHVVDPLQSRGGNSGLHMQ 568
>09_04_0032 - 13953323-13955269
Length = 648
Score = 25.4 bits (53), Expect = 7.4
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +1
Query: 178 GTLTCSWSASMYTTMKPPAASTCPAPP 258
GT C S T PP+ S P+PP
Sbjct: 220 GTGLCGGPLSPCTNTSPPSPSPSPSPP 246
>05_05_0134 + 22619297-22619801,22619879-22621960,22622067-22623718
Length = 1412
Score = 25.4 bits (53), Expect = 7.4
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -3
Query: 257 GGAGHVLAAGGFIVVYIDALQLQVRVPMVGTGGVDAVLVGDD 132
GG+ AAG V +A++ +V V + G +A +V D
Sbjct: 47 GGSSAPAAAGDADVTMTEAVEEEVEVEVAGDAEAEAAVVAGD 88
>02_04_0021 + 18975992-18976408
Length = 138
Score = 25.4 bits (53), Expect = 7.4
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +1
Query: 217 TMKPPAASTCPAPPRRLG 270
T KPPA S P PP+ G
Sbjct: 112 TPKPPAPSPSPPPPKAAG 129
>11_01_0047 + 358370-360107,360713-361353
Length = 792
Score = 25.0 bits (52), Expect = 9.8
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -3
Query: 269 PSRRGGAGHVLAA 231
PS GGAGHV AA
Sbjct: 775 PSEEGGAGHVAAA 787
>10_08_0683 -
19860777-19861070,19861677-19861874,19862498-19862659,
19862763-19862911,19863089-19863236,19863317-19863385,
19863471-19863719,19863937-19864131,19864444-19864560,
19864978-19866537
Length = 1046
Score = 25.0 bits (52), Expect = 9.8
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +3
Query: 126 WEIISDEHGIDPTGAYHGDSXLQLERI 206
W S HGI G + D+ L +ERI
Sbjct: 658 WLKASKRHGIKKLGKSYDDALLSIERI 684
>10_02_0174 - 6202334-6204922
Length = 862
Score = 25.0 bits (52), Expect = 9.8
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +1
Query: 205 SMYTTMKPPAASTCPAPPRRLGARH 279
S TT+ PPA S+ P P L RH
Sbjct: 19 SRVTTLPPPAPSSPPHPIPPLSFRH 43
>07_03_1416 - 26415330-26417153
Length = 607
Score = 25.0 bits (52), Expect = 9.8
Identities = 8/22 (36%), Positives = 16/22 (72%)
Frame = +3
Query: 114 GAKFWEIISDEHGIDPTGAYHG 179
G K++ +++ HGI+PT ++G
Sbjct: 355 GKKYFRSMNEVHGIEPTVEHYG 376
>07_03_1206 + 24878301-24879308
Length = 335
Score = 25.0 bits (52), Expect = 9.8
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +2
Query: 170 LPWGLXLAVGAHQCILQ*SLRRQVRAPRLLVDL 268
LPW L VGA + SLRR R L+ L
Sbjct: 13 LPWRARLLVGAVSVLHSASLRRDGTVNRFLLSL 45
>05_06_0110 + 25632514-25632834,25633200-25634039
Length = 386
Score = 25.0 bits (52), Expect = 9.8
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 190 CSWSASMYTTMKPPAASTCPA 252
CSWS+ + PPA+ PA
Sbjct: 185 CSWSSRLMVLPPPPASPPSPA 205
>04_01_0541 - 6998030-6998521,7000666-7000732,7001057-7001202
Length = 234
Score = 25.0 bits (52), Expect = 9.8
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 226 PPAASTCPAPPRRLGARHHG 285
PP++S+ PP R A+ HG
Sbjct: 100 PPSSSSASPPPERSPAKPHG 119
>02_02_0354 + 9283886-9285505,9287158-9287251,9287817-9289915
Length = 1270
Score = 25.0 bits (52), Expect = 9.8
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -3
Query: 161 GVDAVLVGDDLPELSSDLVAA 99
GV + L+G L +LSSDLVAA
Sbjct: 6 GVASWLLGKVLTQLSSDLVAA 26
>02_01_0417 -
3048519-3048710,3048903-3050600,3050622-3050909,
3052308-3052377,3052417-3052668,3053235-3055297
Length = 1520
Score = 25.0 bits (52), Expect = 9.8
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 195 LERINVYYNEASGGKYVPRASSST 266
L R+N+ YN SGG V SSS+
Sbjct: 847 LSRLNLSYNSLSGGLPVELMSSSS 870
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,389,360
Number of Sequences: 37544
Number of extensions: 170960
Number of successful extensions: 762
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 758
length of database: 14,793,348
effective HSP length: 70
effective length of database: 12,165,268
effective search space used: 304131700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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