Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0395
(289 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 138 5e-34
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 133 2e-32
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 133 2e-32
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 130 2e-31
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 1e-09
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 55 8e-09
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 54 2e-08
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 54 3e-08
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 3e-08
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 54 3e-08
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 53 3e-08
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 6e-08
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 8e-08
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 9e-06
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 1e-05
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 32 0.067
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 27 1.9
SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 1.9
SB_53041| Best HMM Match : E1-E2_ATPase (HMM E-Value=5.7e-20) 27 3.3
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 27 3.3
SB_9321| Best HMM Match : DDE (HMM E-Value=5.40004e-41) 26 4.4
SB_38407| Best HMM Match : DDE (HMM E-Value=5.40004e-41) 26 4.4
SB_30971| Best HMM Match : Y_Y_Y (HMM E-Value=0.28) 26 5.8
SB_28645| Best HMM Match : TIL (HMM E-Value=4.8) 25 7.7
SB_2049| Best HMM Match : Ribosomal_LX (HMM E-Value=0.98) 25 7.7
SB_55694| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 7.7
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 138 bits (335), Expect = 5e-34
Identities = 62/72 (86%), Positives = 65/72 (90%)
Frame = +3
Query: 39 IYSSHK*NKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXLQLERINVYY 218
+YSS KMREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDS LQLERINVYY
Sbjct: 205 VYSSKLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYY 264
Query: 219 NEASGGKYVPRA 254
NEA+GGKYVPRA
Sbjct: 265 NEATGGKYVPRA 276
Score = 27.5 bits (58), Expect = 1.9
Identities = 13/15 (86%), Positives = 14/15 (93%), Gaps = 1/15 (6%)
Frame = +2
Query: 248 PR-LLVDLEPGTMDS 289
PR +LVDLEPGTMDS
Sbjct: 274 PRAVLVDLEPGTMDS 288
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 133 bits (322), Expect = 2e-32
Identities = 58/63 (92%), Positives = 60/63 (95%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXLQLERINVYYNEASGGKYV 245
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDS LQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 246 PRA 254
PRA
Sbjct: 61 PRA 63
Score = 27.9 bits (59), Expect = 1.4
Identities = 13/15 (86%), Positives = 14/15 (93%), Gaps = 1/15 (6%)
Frame = +2
Query: 248 PR-LLVDLEPGTMDS 289
PR +LVDLEPGTMDS
Sbjct: 61 PRAILVDLEPGTMDS 75
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 133 bits (322), Expect = 2e-32
Identities = 58/63 (92%), Positives = 60/63 (95%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXLQLERINVYYNEASGGKYV 245
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDS LQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 246 PRA 254
PRA
Sbjct: 61 PRA 63
Score = 27.9 bits (59), Expect = 1.4
Identities = 13/15 (86%), Positives = 14/15 (93%), Gaps = 1/15 (6%)
Frame = +2
Query: 248 PR-LLVDLEPGTMDS 289
PR +LVDLEPGTMDS
Sbjct: 61 PRAILVDLEPGTMDS 75
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 130 bits (313), Expect = 2e-31
Identities = 56/63 (88%), Positives = 60/63 (95%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXLQLERINVYYNEASGGKYV 245
MREIV +QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDS LQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 246 PRA 254
PR+
Sbjct: 61 PRS 63
Score = 27.1 bits (57), Expect = 2.5
Identities = 12/15 (80%), Positives = 14/15 (93%), Gaps = 1/15 (6%)
Frame = +2
Query: 248 PR-LLVDLEPGTMDS 289
PR +L+DLEPGTMDS
Sbjct: 61 PRSVLIDLEPGTMDS 75
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 58.0 bits (134), Expect = 1e-09
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXLQ--LERINVYYNEASGGK 239
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GGK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 240 YVPRA 254
+VPRA
Sbjct: 61 HVPRA 65
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 55.2 bits (127), Expect = 8e-09
Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXL--QLERINVYYNEASGGK 239
MRE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 240 YVPRA 254
+VPRA
Sbjct: 61 HVPRA 65
Score = 53.2 bits (122), Expect = 3e-08
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +3
Query: 69 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXL--QLERINVYYNEASGGKY 242
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 494
Query: 243 VPRA 254
VPRA
Sbjct: 495 VPRA 498
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 54.0 bits (124), Expect = 2e-08
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXL--QLERINVYYNEASGGK 239
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 240 YVPRA 254
+VPRA
Sbjct: 61 HVPRA 65
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 53.6 bits (123), Expect = 3e-08
Identities = 27/65 (41%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXL--QLERINVYYNEASGGK 239
MRE + I GQ G QIG WE+ EHGI P G D + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 240 YVPRA 254
+VPRA
Sbjct: 61 HVPRA 65
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 53.6 bits (123), Expect = 3e-08
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXL--QLERINVYYNEASGGK 239
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 240 YVPRA 254
+VPRA
Sbjct: 61 HVPRA 65
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 53.6 bits (123), Expect = 3e-08
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXL--QLERINVYYNEASGGK 239
+RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 240 YVPRA 254
+VPRA
Sbjct: 646 HVPRA 650
Score = 53.2 bits (122), Expect = 3e-08
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +3
Query: 69 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXL--QLERINVYYNEASGGKY 242
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 243 VPRA 254
VPRA
Sbjct: 574 VPRA 577
Score = 52.8 bits (121), Expect = 4e-08
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +3
Query: 69 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXL--QLERINVYYNEASGGKY 242
RE + + GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 66 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 125
Query: 243 VPRA 254
VPRA
Sbjct: 126 VPRA 129
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 53.2 bits (122), Expect = 3e-08
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +3
Query: 69 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXL--QLERINVYYNEASGGKY 242
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 243 VPRA 254
VPRA
Sbjct: 61 VPRA 64
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 52.4 bits (120), Expect = 6e-08
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +3
Query: 69 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXL--QLERINVYYNEASGGKY 242
RE V I GQ G Q+G WE+ EHGI P G D + + N +++E GK+
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 479
Query: 243 VPRA 254
VPRA
Sbjct: 480 VPRA 483
Score = 38.3 bits (85), Expect = 0.001
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +3
Query: 111 IGAKFWEIISDEHGIDPTGAYHGDSXL--QLERINVYYNEASGGKYVPRA 254
+G WE+ EHGI P G D + + N +++E GK+VPRA
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRA 50
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 52.0 bits (119), Expect = 8e-08
Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +3
Query: 69 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXL--QLERINVYYNEASGGKY 242
RE + I GQ G QIG WE+ EHGI P G D + + N ++ E GK+
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 243 VPRA 254
VPRA
Sbjct: 433 VPRA 436
Score = 52.0 bits (119), Expect = 8e-08
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +3
Query: 69 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXL--QLERINVYYNEASGGKY 242
RE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK+
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 865
Query: 243 VPRASSSTWSP 275
VPRA + P
Sbjct: 866 VPRAVFADLEP 876
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 45.2 bits (102), Expect = 9e-06
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXLQL--ERINVYYNEASGGK 239
MRE + I GQ G QIG WE+ EHGI P G D + + +++E + GK
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDGHMPSDQSADRCDDSFSTFFSETASGK 255
Query: 240 YVPRAS 257
+ + +
Sbjct: 256 HADQCT 261
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 44.8 bits (101), Expect = 1e-05
Identities = 18/35 (51%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +3
Query: 123 FWEIISDEHGIDPTGAYHG-DSXLQLERINVYYNE 224
FWE+I++EHGIDP G S +Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 32.3 bits (70), Expect = 0.067
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +3
Query: 75 IVHIQAGQCGNQIGAKFWEIISDE 146
IV +Q GQCGNQIG + +++I ++
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVED 26
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 27.5 bits (58), Expect = 1.9
Identities = 13/15 (86%), Positives = 14/15 (93%), Gaps = 1/15 (6%)
Frame = +2
Query: 248 PR-LLVDLEPGTMDS 289
PR +LVDLEPGTMDS
Sbjct: 6 PRAVLVDLEPGTMDS 20
>SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.5 bits (58), Expect = 1.9
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -3
Query: 221 IVVYIDALQLQVRVPM-VGTGGVDAVLVGDDLPEL 120
I VY DA++LQV P+ G+D + V D EL
Sbjct: 48 ITVYADAVELQVTYPLRAPLRGIDLITVYADAVEL 82
>SB_53041| Best HMM Match : E1-E2_ATPase (HMM E-Value=5.7e-20)
Length = 704
Score = 26.6 bits (56), Expect = 3.3
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +3
Query: 204 INVYYNEASGGKYVPRASSSTW 269
+ YY E GKY+P + + W
Sbjct: 95 LGYYYREVCKGKYIPDSEKNAW 116
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 26.6 bits (56), Expect = 3.3
Identities = 12/15 (80%), Positives = 14/15 (93%), Gaps = 1/15 (6%)
Frame = +2
Query: 248 PR-LLVDLEPGTMDS 289
PR +LVDLEPGTMD+
Sbjct: 17 PRSILVDLEPGTMDA 31
>SB_9321| Best HMM Match : DDE (HMM E-Value=5.40004e-41)
Length = 700
Score = 26.2 bits (55), Expect = 4.4
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 166 PVGSMPCSSEMISQNLAPIWLPH*PAWICT 77
P + PC +++ S+ L IW + AWI T
Sbjct: 273 PTANPPCFAKLDSECLPVIWRANRRAWITT 302
>SB_38407| Best HMM Match : DDE (HMM E-Value=5.40004e-41)
Length = 700
Score = 26.2 bits (55), Expect = 4.4
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 166 PVGSMPCSSEMISQNLAPIWLPH*PAWICT 77
P + PC +++ S+ L IW + AWI T
Sbjct: 273 PTANPPCFAKLDSECLPVIWRANRRAWITT 302
>SB_30971| Best HMM Match : Y_Y_Y (HMM E-Value=0.28)
Length = 290
Score = 25.8 bits (54), Expect = 5.8
Identities = 13/45 (28%), Positives = 18/45 (40%)
Frame = +3
Query: 153 IDPTGAYHGDSXLQLERINVYYNEASGGKYVPRASSSTWSPAPWT 287
ID G G + Y + G +P + TW+PA WT
Sbjct: 149 IDSWGTTDGSIFTPANGVGYTYRRLASGTVLP---TLTWNPADWT 190
>SB_28645| Best HMM Match : TIL (HMM E-Value=4.8)
Length = 161
Score = 25.4 bits (53), Expect = 7.7
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +3
Query: 84 IQAGQCGNQIGAKFWEIISDEHG 152
++ G+C ++IG W + S HG
Sbjct: 6 VERGRCSDEIGLLGWSLTSIAHG 28
>SB_2049| Best HMM Match : Ribosomal_LX (HMM E-Value=0.98)
Length = 731
Score = 25.4 bits (53), Expect = 7.7
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2
Query: 146 ARHRPHRCLPW 178
ARH+PH C+ W
Sbjct: 184 ARHQPHSCISW 194
>SB_55694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 67
Score = 25.4 bits (53), Expect = 7.7
Identities = 13/24 (54%), Positives = 16/24 (66%), Gaps = 3/24 (12%)
Frame = -3
Query: 257 GGAGHVLAAGGF---IVVYIDALQ 195
GG GHV A GG+ +V+IDA Q
Sbjct: 35 GGKGHVEAIGGYYHIALVWIDATQ 58
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,682,103
Number of Sequences: 59808
Number of extensions: 154657
Number of successful extensions: 434
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 394
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 419
length of database: 16,821,457
effective HSP length: 70
effective length of database: 12,634,897
effective search space used: 315872425
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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