Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0395
(289 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 135 4e-33
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 125 6e-30
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 122 3e-29
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 122 3e-29
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 118 9e-28
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 116 2e-27
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 97 2e-21
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 97 2e-21
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 60 3e-10
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 59 4e-10
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 59 4e-10
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 59 4e-10
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 58 1e-09
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 58 1e-09
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 58 1e-09
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 55 9e-09
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 55 9e-09
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 55 9e-09
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 55 9e-09
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 55 9e-09
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 53 4e-08
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 50 2e-07
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 48 1e-06
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 48 1e-06
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 45 8e-06
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 37 0.003
AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen prot... 27 2.9
Z70266-6|CAD57691.1| 795|Caenorhabditis elegans Hypothetical pr... 26 3.8
Z70266-5|CAA94208.1| 798|Caenorhabditis elegans Hypothetical pr... 26 3.8
AL023827-4|CAD57709.1| 795|Caenorhabditis elegans Hypothetical ... 26 3.8
AL023827-3|CAA19446.1| 798|Caenorhabditis elegans Hypothetical ... 26 3.8
Z69663-5|CAA93512.2| 1002|Caenorhabditis elegans Hypothetical pr... 25 6.6
Z69661-8|CAA93496.2| 1002|Caenorhabditis elegans Hypothetical pr... 25 6.6
DQ178241-1|ABA18180.1| 1010|Caenorhabditis elegans argonaute-lik... 25 6.6
AF016682-2|AAO38604.1| 891|Caenorhabditis elegans Argonaute (pl... 25 6.6
AF016682-1|AAB66187.2| 910|Caenorhabditis elegans Argonaute (pl... 25 6.6
Z92817-4|CAB07297.3| 633|Caenorhabditis elegans Hypothetical pr... 25 8.7
Z92790-2|CAB07224.2| 377|Caenorhabditis elegans Hypothetical pr... 25 8.7
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 135 bits (327), Expect = 4e-33
Identities = 60/63 (95%), Positives = 62/63 (98%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXLQLERINVYYNEASGGKYV 245
MREIVHIQAGQCGNQIGAKFWE+ISDEHGIDPTGAY+GDS LQLERINVYYNEASGGKYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYV 60
Query: 246 PRA 254
PRA
Sbjct: 61 PRA 63
Score = 26.6 bits (56), Expect = 2.9
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +2
Query: 257 LVDLEPGTMDS 289
LVDLEPGTMDS
Sbjct: 65 LVDLEPGTMDS 75
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 125 bits (301), Expect = 6e-30
Identities = 54/63 (85%), Positives = 58/63 (92%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXLQLERINVYYNEASGGKYV 245
MREIVH+QAGQCGNQIGAKFWE+ISDEHGI P G Y G+S LQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYV 60
Query: 246 PRA 254
PRA
Sbjct: 61 PRA 63
Score = 27.5 bits (58), Expect = 1.6
Identities = 13/15 (86%), Positives = 14/15 (93%), Gaps = 1/15 (6%)
Frame = +2
Query: 248 PR-LLVDLEPGTMDS 289
PR +LVDLEPGTMDS
Sbjct: 61 PRAVLVDLEPGTMDS 75
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 122 bits (295), Expect = 3e-29
Identities = 54/63 (85%), Positives = 57/63 (90%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXLQLERINVYYNEASGGKYV 245
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDS LQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 246 PRA 254
PRA
Sbjct: 61 PRA 63
Score = 27.5 bits (58), Expect = 1.6
Identities = 13/15 (86%), Positives = 14/15 (93%), Gaps = 1/15 (6%)
Frame = +2
Query: 248 PR-LLVDLEPGTMDS 289
PR +LVDLEPGTMDS
Sbjct: 61 PRAVLVDLEPGTMDS 75
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 122 bits (295), Expect = 3e-29
Identities = 54/63 (85%), Positives = 57/63 (90%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXLQLERINVYYNEASGGKYV 245
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDS LQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 246 PRA 254
PRA
Sbjct: 61 PRA 63
Score = 27.5 bits (58), Expect = 1.6
Identities = 13/15 (86%), Positives = 14/15 (93%), Gaps = 1/15 (6%)
Frame = +2
Query: 248 PR-LLVDLEPGTMDS 289
PR +LVDLEPGTMDS
Sbjct: 61 PRAVLVDLEPGTMDS 75
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 118 bits (283), Expect = 9e-28
Identities = 50/63 (79%), Positives = 57/63 (90%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXLQLERINVYYNEASGGKYV 245
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G+S LQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYV 60
Query: 246 PRA 254
PRA
Sbjct: 61 PRA 63
Score = 27.5 bits (58), Expect = 1.6
Identities = 13/15 (86%), Positives = 14/15 (93%), Gaps = 1/15 (6%)
Frame = +2
Query: 248 PR-LLVDLEPGTMDS 289
PR +LVDLEPGTMDS
Sbjct: 61 PRAVLVDLEPGTMDS 75
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 116 bits (280), Expect = 2e-27
Identities = 49/63 (77%), Positives = 57/63 (90%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXLQLERINVYYNEASGGKYV 245
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G++ LQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYV 60
Query: 246 PRA 254
PRA
Sbjct: 61 PRA 63
Score = 27.5 bits (58), Expect = 1.6
Identities = 13/15 (86%), Positives = 14/15 (93%), Gaps = 1/15 (6%)
Frame = +2
Query: 248 PR-LLVDLEPGTMDS 289
PR +LVDLEPGTMDS
Sbjct: 61 PRAVLVDLEPGTMDS 75
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 97.1 bits (231), Expect = 2e-21
Identities = 41/63 (65%), Positives = 48/63 (76%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXLQLERINVYYNEASGGKYV 245
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 246 PRA 254
PRA
Sbjct: 61 PRA 63
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 97.1 bits (231), Expect = 2e-21
Identities = 41/63 (65%), Positives = 48/63 (76%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXLQLERINVYYNEASGGKYV 245
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 246 PRA 254
PRA
Sbjct: 61 PRA 63
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 60.1 bits (139), Expect = 3e-10
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Frame = +3
Query: 60 NKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXLQL--ERINVYYNEASG 233
N+ RE++ I GQ G Q+G WE+ EHGI P G + + L + + N +++E
Sbjct: 4 NRSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMA 63
Query: 234 GKYVPRASSSTWSPAP 281
GK+VPRA P P
Sbjct: 64 GKHVPRAIMVDLEPTP 79
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 59.3 bits (137), Expect = 4e-10
Identities = 29/64 (45%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Frame = +3
Query: 69 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXL---QLERINVYYNEASGGK 239
RE++ I GQ G QIG WE+ EHGI P G YH + + E IN ++ E +GGK
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDG-YHVEDDTYDEETETINTFFAETAGGK 66
Query: 240 YVPR 251
+VPR
Sbjct: 67 HVPR 70
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 59.3 bits (137), Expect = 4e-10
Identities = 25/63 (39%), Positives = 34/63 (53%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXLQLERINVYYNEASGGKYV 245
MRE++ I GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 246 PRA 254
PR+
Sbjct: 61 PRS 63
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 59.3 bits (137), Expect = 4e-10
Identities = 25/63 (39%), Positives = 34/63 (53%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXLQLERINVYYNEASGGKYV 245
MRE++ I GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 246 PRA 254
PR+
Sbjct: 61 PRS 63
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 58.0 bits (134), Expect = 1e-09
Identities = 30/65 (46%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXLQLE--RINVYYNEASGGK 239
MREIV I GQ G QIG WE+ EHGI P G D+ +E N +++E GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 240 YVPRA 254
+VPRA
Sbjct: 61 HVPRA 65
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 57.6 bits (133), Expect = 1e-09
Identities = 25/63 (39%), Positives = 35/63 (55%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXLQLERINVYYNEASGGKYV 245
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 246 PRA 254
PR+
Sbjct: 61 PRS 63
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 57.6 bits (133), Expect = 1e-09
Identities = 25/63 (39%), Positives = 35/63 (55%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXLQLERINVYYNEASGGKYV 245
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 246 PRA 254
PR+
Sbjct: 61 PRS 63
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 54.8 bits (126), Expect = 9e-09
Identities = 23/63 (36%), Positives = 34/63 (53%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXLQLERINVYYNEASGGKYV 245
MRE++ I GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 246 PRA 254
PR+
Sbjct: 61 PRS 63
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 54.8 bits (126), Expect = 9e-09
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXL--QLERINVYYNEASGGK 239
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 240 YVPRA 254
+VPRA
Sbjct: 61 HVPRA 65
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 54.8 bits (126), Expect = 9e-09
Identities = 23/63 (36%), Positives = 34/63 (53%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXLQLERINVYYNEASGGKYV 245
MRE++ I GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 246 PRA 254
PR+
Sbjct: 61 PRS 63
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 54.8 bits (126), Expect = 9e-09
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXL--QLERINVYYNEASGGK 239
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 240 YVPRA 254
+VPRA
Sbjct: 61 HVPRA 65
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 54.8 bits (126), Expect = 9e-09
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXL--QLERINVYYNEASGGK 239
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 240 YVPRA 254
+VPRA
Sbjct: 61 HVPRA 65
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 52.8 bits (121), Expect = 4e-08
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +3
Query: 69 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXL--QLERINVYYNEASGGKY 242
RE++ I GQ G QIG WE+ EHGI P G D L + + +++E G++
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 243 VPRA 254
VPRA
Sbjct: 61 VPRA 64
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 50.4 bits (115), Expect = 2e-07
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +3
Query: 69 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTG-AYHGDSXLQLERINVYYNEASGGKYV 245
RE V I GQ G QIG WE+ EHG+D G + + + + +++E+ GK+V
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGKHV 65
Query: 246 PRA 254
PRA
Sbjct: 66 PRA 68
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 48.0 bits (109), Expect = 1e-06
Identities = 21/60 (35%), Positives = 35/60 (58%)
Frame = +3
Query: 75 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXLQLERINVYYNEASGGKYVPRA 254
++ + GQCGNQ+ FW+ + DEHGI+ G + + ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 48.0 bits (109), Expect = 1e-06
Identities = 21/60 (35%), Positives = 35/60 (58%)
Frame = +3
Query: 75 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXLQLERINVYYNEASGGKYVPRA 254
++ + GQCGNQ+ FW+ + DEHGI+ G + + ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 45.2 bits (102), Expect = 8e-06
Identities = 22/63 (34%), Positives = 34/63 (53%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXLQLERINVYYNEASGGKYV 245
MRE++ I GQ G QIG WE+ EHGI P G + + ++++ G++V
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGT-SMEPDGNSGSLGTFFSDTGYGRHV 59
Query: 246 PRA 254
PR+
Sbjct: 60 PRS 62
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 36.7 bits (81), Expect = 0.003
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 144 EHGIDPTGAYHGDSXL--QLERINVYYNEASGGKYVPR 251
EHGI P G + D + E IN ++ E +GGK+VPR
Sbjct: 5 EHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPR 42
>AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen protein
50 protein.
Length = 418
Score = 26.6 bits (56), Expect = 2.9
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1
Query: 229 PAASTCPAPPRRLGA 273
P A+ CP PPR LGA
Sbjct: 293 PDAAYCPCPPRTLGA 307
>Z70266-6|CAD57691.1| 795|Caenorhabditis elegans Hypothetical
protein C40C9.5b protein.
Length = 795
Score = 26.2 bits (55), Expect = 3.8
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -3
Query: 158 VDAVLVGDDLPELSSDLVAALTSLDMYDFPHFVL 57
V V + D+PELS TS +DF H +L
Sbjct: 82 VSPVCIQTDMPELSETKAFKHTSAQRFDFNHRLL 115
>Z70266-5|CAA94208.1| 798|Caenorhabditis elegans Hypothetical
protein C40C9.5a protein.
Length = 798
Score = 26.2 bits (55), Expect = 3.8
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -3
Query: 158 VDAVLVGDDLPELSSDLVAALTSLDMYDFPHFVL 57
V V + D+PELS TS +DF H +L
Sbjct: 82 VSPVCIQTDMPELSETKAFKHTSAQRFDFNHRLL 115
>AL023827-4|CAD57709.1| 795|Caenorhabditis elegans Hypothetical
protein C40C9.5b protein.
Length = 795
Score = 26.2 bits (55), Expect = 3.8
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -3
Query: 158 VDAVLVGDDLPELSSDLVAALTSLDMYDFPHFVL 57
V V + D+PELS TS +DF H +L
Sbjct: 82 VSPVCIQTDMPELSETKAFKHTSAQRFDFNHRLL 115
>AL023827-3|CAA19446.1| 798|Caenorhabditis elegans Hypothetical
protein C40C9.5a protein.
Length = 798
Score = 26.2 bits (55), Expect = 3.8
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -3
Query: 158 VDAVLVGDDLPELSSDLVAALTSLDMYDFPHFVL 57
V V + D+PELS TS +DF H +L
Sbjct: 82 VSPVCIQTDMPELSETKAFKHTSAQRFDFNHRLL 115
>Z69663-5|CAA93512.2| 1002|Caenorhabditis elegans Hypothetical
protein F48F7.1 protein.
Length = 1002
Score = 25.4 bits (53), Expect = 6.6
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -1
Query: 271 LQVDEEARGTYLPPE 227
LQV +E + TYLPPE
Sbjct: 471 LQVGQEQKHTYLPPE 485
>Z69661-8|CAA93496.2| 1002|Caenorhabditis elegans Hypothetical
protein F48F7.1 protein.
Length = 1002
Score = 25.4 bits (53), Expect = 6.6
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -1
Query: 271 LQVDEEARGTYLPPE 227
LQV +E + TYLPPE
Sbjct: 471 LQVGQEQKHTYLPPE 485
>DQ178241-1|ABA18180.1| 1010|Caenorhabditis elegans argonaute-like
protein.
Length = 1010
Score = 25.4 bits (53), Expect = 6.6
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -1
Query: 271 LQVDEEARGTYLPPE 227
LQV +E + TYLPPE
Sbjct: 479 LQVGQEQKHTYLPPE 493
>AF016682-2|AAO38604.1| 891|Caenorhabditis elegans Argonaute
(plant)-like gene protein2, isoform b protein.
Length = 891
Score = 25.4 bits (53), Expect = 6.6
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -1
Query: 271 LQVDEEARGTYLPPE 227
LQV +E + TYLPPE
Sbjct: 357 LQVGQEQKHTYLPPE 371
>AF016682-1|AAB66187.2| 910|Caenorhabditis elegans Argonaute
(plant)-like gene protein2, isoform a protein.
Length = 910
Score = 25.4 bits (53), Expect = 6.6
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -1
Query: 271 LQVDEEARGTYLPPE 227
LQV +E + TYLPPE
Sbjct: 376 LQVGQEQKHTYLPPE 390
>Z92817-4|CAB07297.3| 633|Caenorhabditis elegans Hypothetical
protein W08G11.4 protein.
Length = 633
Score = 25.0 bits (52), Expect = 8.7
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +1
Query: 223 KPPAASTCPAPPRRLGARHH 282
KP + T P PP+ RHH
Sbjct: 614 KPAKSHTLPTPPQPKNKRHH 633
>Z92790-2|CAB07224.2| 377|Caenorhabditis elegans Hypothetical
protein H03G16.2 protein.
Length = 377
Score = 25.0 bits (52), Expect = 8.7
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 90 AGQCGNQIGAKFWEIISDEHGIDPTG 167
+G C ++G K WE+ S+ G PTG
Sbjct: 233 SGDCLKKMGKK-WEVTSEAVGPRPTG 257
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,348,579
Number of Sequences: 27780
Number of extensions: 109909
Number of successful extensions: 430
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 417
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 426
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 269889950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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