Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0395
(289 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 121 9e-29
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 120 2e-28
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 118 7e-28
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 117 1e-27
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 117 1e-27
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 116 2e-27
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 114 8e-27
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 113 1e-26
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 111 6e-26
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 60 3e-10
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 59 6e-10
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 59 6e-10
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 58 7e-10
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 58 7e-10
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 56 3e-09
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 56 3e-09
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 54 2e-08
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 54 2e-08
At4g37190.1 68417.m05265 expressed protein 31 0.17
At3g15800.1 68416.m02000 glycosyl hydrolase family 17 protein si... 30 0.30
At1g21850.1 68414.m02735 multi-copper oxidase type I family prot... 30 0.30
At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putati... 27 1.6
At2g32810.1 68415.m04016 beta-galactosidase, putative / lactase,... 27 2.1
At1g68390.1 68414.m07813 expressed protein contains Pfam profile... 27 2.1
At1g27595.1 68414.m03365 expressed protein similar to Symplekin ... 27 2.8
At5g06170.1 68418.m00688 sucrose transporter, putative / sucrose... 26 4.8
At4g29690.1 68417.m04229 type I phosphodiesterase/nucleotide pyr... 26 4.8
At5g02220.1 68418.m00143 expressed protein 25 6.4
At3g13050.1 68416.m01626 transporter-related low similarity to a... 25 6.4
At2g35620.1 68415.m04368 leucine-rich repeat transmembrane prote... 25 6.4
At2g39640.1 68415.m04860 glycosyl hydrolase family 17 protein 25 8.4
At2g23080.2 68415.m02751 casein kinase II alpha chain, putative ... 25 8.4
At2g23080.1 68415.m02752 casein kinase II alpha chain, putative ... 25 8.4
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 121 bits (291), Expect = 9e-29
Identities = 52/64 (81%), Positives = 59/64 (92%), Gaps = 1/64 (1%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-XLQLERINVYYNEASGGKY 242
MREI+H+Q GQCGNQIG+KFWE+I DEHG+DPTG Y+GDS LQLERINVYYNEASGG+Y
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60
Query: 243 VPRA 254
VPRA
Sbjct: 61 VPRA 64
Score = 26.2 bits (55), Expect = 3.7
Identities = 12/15 (80%), Positives = 14/15 (93%), Gaps = 1/15 (6%)
Frame = +2
Query: 248 PR-LLVDLEPGTMDS 289
PR +L+DLEPGTMDS
Sbjct: 62 PRAVLMDLEPGTMDS 76
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 120 bits (288), Expect = 2e-28
Identities = 53/63 (84%), Positives = 57/63 (90%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXLQLERINVYYNEASGGKYV 245
MREI+HIQ GQCGNQIGAKFWE+I DEHGID TG Y GDS LQLERI+VY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60
Query: 246 PRA 254
PRA
Sbjct: 61 PRA 63
Score = 26.2 bits (55), Expect = 3.7
Identities = 12/15 (80%), Positives = 14/15 (93%), Gaps = 1/15 (6%)
Frame = +2
Query: 248 PR-LLVDLEPGTMDS 289
PR +L+DLEPGTMDS
Sbjct: 61 PRAVLMDLEPGTMDS 75
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 118 bits (284), Expect = 7e-28
Identities = 50/63 (79%), Positives = 57/63 (90%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXLQLERINVYYNEASGGKYV 245
MREI+HIQ GQCGNQIG+KFWE++ DEHGIDPTG Y G+S LQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60
Query: 246 PRA 254
PRA
Sbjct: 61 PRA 63
Score = 26.6 bits (56), Expect = 2.8
Identities = 12/15 (80%), Positives = 14/15 (93%), Gaps = 1/15 (6%)
Frame = +2
Query: 248 PR-LLVDLEPGTMDS 289
PR +L+DLEPGTMDS
Sbjct: 61 PRAILMDLEPGTMDS 75
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 117 bits (282), Expect = 1e-27
Identities = 51/63 (80%), Positives = 56/63 (88%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXLQLERINVYYNEASGGKYV 245
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDS LQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 246 PRA 254
PRA
Sbjct: 61 PRA 63
Score = 26.2 bits (55), Expect = 3.7
Identities = 12/15 (80%), Positives = 14/15 (93%), Gaps = 1/15 (6%)
Frame = +2
Query: 248 PR-LLVDLEPGTMDS 289
PR +L+DLEPGTMDS
Sbjct: 61 PRAVLMDLEPGTMDS 75
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 117 bits (282), Expect = 1e-27
Identities = 51/63 (80%), Positives = 56/63 (88%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXLQLERINVYYNEASGGKYV 245
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDS LQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 246 PRA 254
PRA
Sbjct: 61 PRA 63
Score = 26.2 bits (55), Expect = 3.7
Identities = 12/15 (80%), Positives = 14/15 (93%), Gaps = 1/15 (6%)
Frame = +2
Query: 248 PR-LLVDLEPGTMDS 289
PR +L+DLEPGTMDS
Sbjct: 61 PRAVLMDLEPGTMDS 75
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 116 bits (280), Expect = 2e-27
Identities = 52/64 (81%), Positives = 57/64 (89%), Gaps = 1/64 (1%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGD-SXLQLERINVYYNEASGGKY 242
MREI+HIQ GQCGNQIG+KFWE+I DEHGID TG Y GD + LQLERINVYYNEASGG+Y
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60
Query: 243 VPRA 254
VPRA
Sbjct: 61 VPRA 64
Score = 26.2 bits (55), Expect = 3.7
Identities = 12/15 (80%), Positives = 14/15 (93%), Gaps = 1/15 (6%)
Frame = +2
Query: 248 PR-LLVDLEPGTMDS 289
PR +L+DLEPGTMDS
Sbjct: 62 PRAVLMDLEPGTMDS 76
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 114 bits (275), Expect = 8e-27
Identities = 51/63 (80%), Positives = 55/63 (87%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXLQLERINVYYNEASGGKYV 245
MREI+HIQ GQCGNQIGAKFWE+I EHGID TG GD+ LQLERINVY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60
Query: 246 PRA 254
PRA
Sbjct: 61 PRA 63
Score = 26.2 bits (55), Expect = 3.7
Identities = 12/15 (80%), Positives = 14/15 (93%), Gaps = 1/15 (6%)
Frame = +2
Query: 248 PR-LLVDLEPGTMDS 289
PR +L+DLEPGTMDS
Sbjct: 61 PRAVLMDLEPGTMDS 75
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 113 bits (273), Expect = 1e-26
Identities = 49/63 (77%), Positives = 56/63 (88%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXLQLERINVYYNEASGGKYV 245
MREI+HIQ GQCGNQIG+KFWE+++ EHGID TG Y GDS LQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60
Query: 246 PRA 254
PRA
Sbjct: 61 PRA 63
Score = 26.2 bits (55), Expect = 3.7
Identities = 12/15 (80%), Positives = 14/15 (93%), Gaps = 1/15 (6%)
Frame = +2
Query: 248 PR-LLVDLEPGTMDS 289
PR +L+DLEPGTMDS
Sbjct: 61 PRAVLMDLEPGTMDS 75
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 111 bits (268), Expect = 6e-26
Identities = 47/63 (74%), Positives = 55/63 (87%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXLQLERINVYYNEASGGKYV 245
MREI+HIQ GQCGNQIGAKFWE++ EHGID TG Y G++ LQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60
Query: 246 PRA 254
PRA
Sbjct: 61 PRA 63
Score = 26.2 bits (55), Expect = 3.7
Identities = 12/15 (80%), Positives = 14/15 (93%), Gaps = 1/15 (6%)
Frame = +2
Query: 248 PR-LLVDLEPGTMDS 289
PR +L+DLEPGTMDS
Sbjct: 61 PRAVLMDLEPGTMDS 75
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 59.7 bits (138), Expect = 3e-10
Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXLQL--ERINVYYNEASGGK 239
MREI+ I GQ G Q+G WE+ EHGI P G DS + + N +++E S G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 240 YVPRA 254
+VPRA
Sbjct: 61 HVPRA 65
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 58.8 bits (136), Expect = 6e-10
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXLQL--ERINVYYNEASGGK 239
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 240 YVPRA 254
+VPRA
Sbjct: 61 HVPRA 65
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 58.8 bits (136), Expect = 6e-10
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXLQL--ERINVYYNEASGGK 239
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 240 YVPRA 254
+VPRA
Sbjct: 61 HVPRA 65
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 58.4 bits (135), Expect = 7e-10
Identities = 26/62 (41%), Positives = 38/62 (61%)
Frame = +3
Query: 69 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXLQLERINVYYNEASGGKYVP 248
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 249 RA 254
RA
Sbjct: 63 RA 64
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 58.4 bits (135), Expect = 7e-10
Identities = 26/62 (41%), Positives = 38/62 (61%)
Frame = +3
Query: 69 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXLQLERINVYYNEASGGKYVP 248
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 249 RA 254
RA
Sbjct: 63 RA 64
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 56.4 bits (130), Expect = 3e-09
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXL--QLERINVYYNEASGGK 239
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 240 YVPRA 254
+VPRA
Sbjct: 61 HVPRA 65
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 56.4 bits (130), Expect = 3e-09
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXL--QLERINVYYNEASGGK 239
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 240 YVPRA 254
+VPRA
Sbjct: 61 HVPRA 65
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 54.0 bits (124), Expect = 2e-08
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXL--QLERINVYYNEASGGK 239
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 240 YVPRA 254
+VPRA
Sbjct: 61 HVPRA 65
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 54.0 bits (124), Expect = 2e-08
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSXL--QLERINVYYNEASGGK 239
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 240 YVPRA 254
+VPRA
Sbjct: 61 HVPRA 65
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 30.7 bits (66), Expect = 0.17
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGI 155
MREIV IQ G+ N +G+ FW + G+
Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGL 30
>At3g15800.1 68416.m02000 glycosyl hydrolase family 17 protein
similar to elicitor inducible chitinase Nt-SubE76
GI:11071974 from [Nicotiana tabacum]
Length = 399
Score = 29.9 bits (64), Expect = 0.30
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 8/79 (10%)
Frame = -3
Query: 269 PSRRGGAGHVLAAGGFI--VVYIDALQLQVRVPMVGTGGVDAVLVGDDLPELSSDLVAAL 96
P R+ H++ + F+ ++ L Q V +GT GV+ + D+LP S D VA L
Sbjct: 6 PLRKSPTSHMVFSSFFLSFLLVFSILSSQTAVAFIGTYGVNYGRIADNLP--SPDAVATL 63
Query: 95 ------TSLDMYDFPHFVL 57
+ +YD H VL
Sbjct: 64 LKSAKIRNTRIYDADHSVL 82
>At1g21850.1 68414.m02735 multi-copper oxidase type I family protein
similar to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Pfam profile:
PF00394 Multicopper oxidase
Length = 551
Score = 29.9 bits (64), Expect = 0.30
Identities = 24/74 (32%), Positives = 33/74 (44%)
Frame = -3
Query: 236 AAGGFIVVYIDALQLQVRVPMVGTGGVDAVLVGDDLPELSSDLVAALTSLDMYDFPHFVL 57
AAGGF + I + + ++ VP G VL+GD DL A L + FP +L
Sbjct: 136 AAGGFGAIRISS-RPRIPVPFPAPAGDYTVLIGDWYKTNHKDLRAQLDNGGKLPFPDGIL 194
Query: 56 FM*TINYLTLKIXP 15
+ TL I P
Sbjct: 195 INGRGSGATLNIEP 208
>At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putative
similar to (1-4)-beta-mannan endohydrolase [Coffea
arabica] GI:10178872, (1-4)-beta-mannan endohydrolase
GB:AAB87859 [Lycopersicon esculentum]; contains Pfam
profile PF00150: Cellulase (glycosyl hydrolase family 5)
Length = 408
Score = 27.5 bits (58), Expect = 1.6
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 72 EIVHIQAGQCGNQIGAKFWEIISD 143
+I++ A + G+ GA FWE+IS+
Sbjct: 346 DIIYASAQKGGSAAGALFWEVISE 369
>At2g32810.1 68415.m04016 beta-galactosidase, putative / lactase,
putative similar to beta-galactosidase GI:7939617 from
[Lycopersicon esculentum]
Length = 887
Score = 27.1 bits (57), Expect = 2.1
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +3
Query: 87 QAGQCGNQIGAKFWEIISDEHGIDPTGAYHG 179
QA G IG ++W IIS + G D T Y G
Sbjct: 678 QAWVNGQHIG-RYWNIISQKDGCDRTCDYRG 707
>At1g68390.1 68414.m07813 expressed protein contains Pfam profile
PF03267: Arabidopsis protein of unknown function,
DUF266; expression supported by MPSS
Length = 408
Score = 27.1 bits (57), Expect = 2.1
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +2
Query: 80 TYPSWSMRQPDRS*VLGDHLRRARHRPHRCLPWGLXLAVGAHQCIL 217
+YPS++ P+ D + R RH P + + WG V A Q +L
Sbjct: 172 SYPSYNQSDPE------DSVFRGRHIPSKRVDWGYVNMVEAEQRLL 211
>At1g27595.1 68414.m03365 expressed protein similar to Symplekin
(SP:Q92797) {Homo sapiens}
Length = 1091
Score = 26.6 bits (56), Expect = 2.8
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 166 PVGSMPCSSEMISQNLAPIW 107
PVG C SE ++Q L +W
Sbjct: 655 PVGKEVCDSERVTQGLGAVW 674
>At5g06170.1 68418.m00688 sucrose transporter, putative /
sucrose-proton symporter, putative similar to
sucrose-proton symporter SUC1 [Arabidopsis thaliana]
GI:407094, sucrose transporter [Arabidopsis thaliana]
GI:12057172; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 491
Score = 25.8 bits (54), Expect = 4.8
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = -3
Query: 266 SRRGGAGHVLAAGGFIVVYIDALQLQVRVPMVGTGGVDAVLVGDDLPELSSDLVAALTS 90
S GAG L+ G V A+ + + G G +DA+ G +LP +AAL S
Sbjct: 428 SSSSGAGQGLSLG----VLNMAIVIPQMIVSFGVGPIDALFGGGNLPGFVVGAIAALIS 482
>At4g29690.1 68417.m04229 type I phosphodiesterase/nucleotide
pyrophosphatase family protein similar to SP|P22413
Ectonucleotide pyrophosphatase/phosphodiesterase 1
(Plasma-cell membrane glycoprotein PC-1) [Includes:
Alkaline phosphodiesterase I (EC 3.1.4.1); Nucleotide
pyrophosphatase (EC 3.6.1.9) {Homo sapiens}; contains
Pfam profile PF01663: Type I phosphodiesterase /
nucleotide pyrophosphatase
Length = 457
Score = 25.8 bits (54), Expect = 4.8
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -1
Query: 151 PCSSEMISQNLAPIWLPH*PAWICTIS 71
P S E+ ++NL P W P W+ ++
Sbjct: 126 PVSGELFNRNLNPKWWLGEPLWVTAVN 152
>At5g02220.1 68418.m00143 expressed protein
Length = 72
Score = 25.4 bits (53), Expect = 6.4
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 214 TTMKPPAASTCPAPPRR 264
T + P AS CP PPR+
Sbjct: 21 TMYRIPVASVCPPPPRK 37
>At3g13050.1 68416.m01626 transporter-related low similarity to
apical organic cation transporter [Sus scrofa]
GI:2062135, SP|Q02563 Synaptic vesicle protein 2 (SV2)
{Rattus norvegicus}; contains Pfam profile PF00083:
major facilitator superfamily protein
Length = 500
Score = 25.4 bits (53), Expect = 6.4
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 102 GNQIGAKFWEIISDEHG 152
G IGA W I+SD+HG
Sbjct: 72 GMLIGAYSWGIVSDKHG 88
>At2g35620.1 68415.m04368 leucine-rich repeat transmembrane protein
kinase, putative similar to somatic embryogenesis
receptor-like kinase 1 (SERK1) [Zea mays]
gi|13897318|emb|CAC37640; contains leucine rich repeat
(LRR) domains, Pfam:PF00560; contains protein kinase
domain, Pfam:PF00069
Length = 589
Score = 25.4 bits (53), Expect = 6.4
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = -3
Query: 230 GGFIVVYIDALQLQVRVPMVGTGGVDAVLVGDDLPELSSDLVAALTSLD 84
G F+ + ++ + V VG GG V+ DLP S D++ L SL+
Sbjct: 258 GCFLYKKLGRVESKSLVIDVG-GGASIVMFHGDLPYASKDIIKKLESLN 305
>At2g39640.1 68415.m04860 glycosyl hydrolase family 17 protein
Length = 549
Score = 25.0 bits (52), Expect = 8.4
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +1
Query: 184 LTCSWSASMYTTMKPPAASTCPAP 255
+ C +S + T P+ STCP P
Sbjct: 420 VVCDFSGTGIVTSTNPSTSTCPIP 443
>At2g23080.2 68415.m02751 casein kinase II alpha chain, putative
identical to probable casein kinase II, alpha chain
[Arabidopsis thaliana] SWISS-PROT:O64817; similar to
casein kinase II, alpha chain 1 [Arabidopsis thaliana]
SWISS-PROT:Q08467
Length = 307
Score = 25.0 bits (52), Expect = 8.4
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +3
Query: 54 K*NKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPT 164
K K++ + I CG K ++I+ DEH P+
Sbjct: 69 KKKKIKREIKILQNLCGGPNIVKLYDIVRDEHSKTPS 105
>At2g23080.1 68415.m02752 casein kinase II alpha chain, putative
identical to probable casein kinase II, alpha chain
[Arabidopsis thaliana] SWISS-PROT:O64817; similar to
casein kinase II, alpha chain 1 [Arabidopsis thaliana]
SWISS-PROT:Q08467
Length = 333
Score = 25.0 bits (52), Expect = 8.4
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +3
Query: 54 K*NKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPT 164
K K++ + I CG K ++I+ DEH P+
Sbjct: 69 KKKKIKREIKILQNLCGGPNIVKLYDIVRDEHSKTPS 105
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,142,561
Number of Sequences: 28952
Number of extensions: 111523
Number of successful extensions: 395
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 387
length of database: 12,070,560
effective HSP length: 69
effective length of database: 10,072,872
effective search space used: 261894672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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