BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= tesS0392 (449 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 28 2.7 Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 28 2.7 Z47809-1|CAA87779.1| 370|Caenorhabditis elegans Hypothetical pr... 28 2.7 U53149-5|AAA96121.2| 427|Caenorhabditis elegans Hypothetical pr... 28 3.6 Z70266-1|CAB61045.1| 364|Caenorhabditis elegans Hypothetical pr... 27 4.8 AF083646-1|AAC32857.1| 364|Caenorhabditis elegans putative pota... 27 4.8 AF040657-2|AAB95050.2| 312|Caenorhabditis elegans Hypothetical ... 27 4.8 Z22175-2|CAA80131.2| 520|Caenorhabditis elegans Hypothetical pr... 27 8.3 Z11115-20|CAA77460.2| 520|Caenorhabditis elegans Hypothetical p... 27 8.3 AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 27 8.3 AF026212-4|AAF99973.2| 386|Caenorhabditis elegans Hypothetical ... 27 8.3 >Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical protein ZK945.9 protein. Length = 3178 Score = 28.3 bits (60), Expect = 2.7 Identities = 19/56 (33%), Positives = 28/56 (50%) Frame = -2 Query: 445 VLLPFHGLSGNSSPGCPLVCTILSPFTSTTQRNRAQHVGNSTFSSSMYSWHSSAFS 278 V P S ++SP + + +P TSTT + + +ST SSS+ S SS S Sbjct: 472 VTTPTSTESTSTSPSSTVTTSTTAPSTSTTGPSSSSSTPSSTASSSVSSTASSTQS 527 >Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical protein ZK945.9 protein. Length = 3178 Score = 28.3 bits (60), Expect = 2.7 Identities = 19/56 (33%), Positives = 28/56 (50%) Frame = -2 Query: 445 VLLPFHGLSGNSSPGCPLVCTILSPFTSTTQRNRAQHVGNSTFSSSMYSWHSSAFS 278 V P S ++SP + + +P TSTT + + +ST SSS+ S SS S Sbjct: 472 VTTPTSTESTSTSPSSTVTTSTTAPSTSTTGPSSSSSTPSSTASSSVSSTASSTQS 527 >Z47809-1|CAA87779.1| 370|Caenorhabditis elegans Hypothetical protein F42A8.1 protein. Length = 370 Score = 28.3 bits (60), Expect = 2.7 Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 2/63 (3%) Frame = +1 Query: 121 DVSYQACVDKYSRKGYQPWQEWSDHYTCHRYRCEIRDGKYFIAAVD--VENQKYRKTHWN 294 + Y ACV R YQ + W+D + YRC DG+ ++ + + K R+ Sbjct: 103 EFGYSACVGTDGRT-YQKGETWTDAKNTYYYRCR-DDGRVVKTTIEGCIAHDKQRRVPLG 160 Query: 295 ATN 303 T+ Sbjct: 161 QTD 163 >U53149-5|AAA96121.2| 427|Caenorhabditis elegans Hypothetical protein C24B5.1 protein. Length = 427 Score = 27.9 bits (59), Expect = 3.6 Identities = 13/35 (37%), Positives = 16/35 (45%) Frame = -1 Query: 371 IYFDDATQSRTARGEFDILIFDVFVAFQCVFRYFW 267 IYF D Q R + IF+ F+A C F W Sbjct: 140 IYFYDIFQDSLLRNSYYSCIFNTFLAHVCDFASVW 174 >Z70266-1|CAB61045.1| 364|Caenorhabditis elegans Hypothetical protein C40C9.1 protein. Length = 364 Score = 27.5 bits (58), Expect = 4.8 Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%) Frame = +3 Query: 210 LQMRDQRREILHS-CCGCRKPKIPEN 284 L+ R RR I + CCGC KP+ P + Sbjct: 319 LRRRSTRRSIQDTVCCGCFKPRPPRH 344 >AF083646-1|AAC32857.1| 364|Caenorhabditis elegans putative potassium channel subunitn2P20 protein. Length = 364 Score = 27.5 bits (58), Expect = 4.8 Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%) Frame = +3 Query: 210 LQMRDQRREILHS-CCGCRKPKIPEN 284 L+ R RR I + CCGC KP+ P + Sbjct: 319 LRRRSTRRSIQDTVCCGCFKPRPPRH 344 >AF040657-2|AAB95050.2| 312|Caenorhabditis elegans Hypothetical protein T20H9.1 protein. Length = 312 Score = 27.5 bits (58), Expect = 4.8 Identities = 14/42 (33%), Positives = 21/42 (50%) Frame = -1 Query: 380 SLSIYFDDATQSRTARGEFDILIFDVFVAFQCVFRYFWFSTS 255 SLS+ FD T+ + D++ D F + F WFST+ Sbjct: 219 SLSVEFDFFTEENAIKIRDDLMKRDTFRRCEVWFNSSWFSTA 260 >Z22175-2|CAA80131.2| 520|Caenorhabditis elegans Hypothetical protein ZK637.1 protein. Length = 520 Score = 26.6 bits (56), Expect = 8.3 Identities = 14/32 (43%), Positives = 17/32 (53%) Frame = -2 Query: 445 VLLPFHGLSGNSSPGCPLVCTILSPFTSTTQR 350 VLL F GL+G G P T+ + F T QR Sbjct: 174 VLLFFRGLTGFGIGGVPQSVTLYAEFLPTAQR 205 >Z11115-20|CAA77460.2| 520|Caenorhabditis elegans Hypothetical protein ZK637.1 protein. Length = 520 Score = 26.6 bits (56), Expect = 8.3 Identities = 14/32 (43%), Positives = 17/32 (53%) Frame = -2 Query: 445 VLLPFHGLSGNSSPGCPLVCTILSPFTSTTQR 350 VLL F GL+G G P T+ + F T QR Sbjct: 174 VLLFFRGLTGFGIGGVPQSVTLYAEFLPTAQR 205 >AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical protein Y8A9A.2 protein. Length = 1360 Score = 26.6 bits (56), Expect = 8.3 Identities = 13/33 (39%), Positives = 15/33 (45%) Frame = +3 Query: 246 SCCGCRKPKIPENALECHEYIEDENVEFPTCCA 344 SCCG RK I EC +D + T CA Sbjct: 868 SCCGARKKVIVGRTFECSS-ADDSDAAPSTLCA 899 >AF026212-4|AAF99973.2| 386|Caenorhabditis elegans Hypothetical protein F52G3.5 protein. Length = 386 Score = 26.6 bits (56), Expect = 8.3 Identities = 12/41 (29%), Positives = 19/41 (46%) Frame = +1 Query: 88 CCLVLPALSAEDVSYQACVDKYSRKGYQPWQEWSDHYTCHR 210 CC++ P ++ DV RKGY+ + + TC R Sbjct: 295 CCILTPQINCTDVLTGCLTHLCDRKGYRQFMTNNCAKTCAR 335 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,144,030 Number of Sequences: 27780 Number of extensions: 235188 Number of successful extensions: 761 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 747 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 761 length of database: 12,740,198 effective HSP length: 75 effective length of database: 10,656,698 effective search space used: 788595652 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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