Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0388
(369 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78059-1|CAH04725.2| 348|Caenorhabditis elegans Hypothetical pr... 29 1.0
Z92780-2|CAB07177.1| 115|Caenorhabditis elegans Hypothetical pr... 27 3.2
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 27 4.2
AL117195-21|CAB55033.2| 313|Caenorhabditis elegans Hypothetical... 27 4.2
Z69637-2|CAA93466.1| 199|Caenorhabditis elegans Hypothetical pr... 27 5.5
U61949-8|AAU05569.1| 332|Caenorhabditis elegans Hypothetical pr... 26 7.3
U61949-7|AAB03155.1| 510|Caenorhabditis elegans Hypothetical pr... 26 7.3
U23525-5|AAC46568.1| 465|Caenorhabditis elegans Yeast smf (diva... 26 7.3
Z71266-8|CAA95846.2| 729|Caenorhabditis elegans Hypothetical pr... 26 9.7
Z68299-2|CAA92611.2| 344|Caenorhabditis elegans Hypothetical pr... 26 9.7
U39851-2|AAF99874.1| 540|Caenorhabditis elegans Hypothetical pr... 26 9.7
>Z78059-1|CAH04725.2| 348|Caenorhabditis elegans Hypothetical
protein C34B4.5 protein.
Length = 348
Score = 29.1 bits (62), Expect = 1.0
Identities = 21/66 (31%), Positives = 33/66 (50%)
Frame = +2
Query: 32 YVYKVFILNTILLFFRTLSCKYL*LFRYFSLKMDMNNPPNQSYWFVLREDQSNVILSTNN 211
+V +F+L+T+ T S + +F + LK P + +WF+L+ S ILST N
Sbjct: 43 FVILLFVLSTVTATLLTASFLIMAVFLWNHLK------PMKFFWFLLQLTISAFILSTLN 96
Query: 212 FVNQNP 229
V P
Sbjct: 97 LVFNVP 102
>Z92780-2|CAB07177.1| 115|Caenorhabditis elegans Hypothetical
protein C45G3.4 protein.
Length = 115
Score = 27.5 bits (58), Expect = 3.2
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +1
Query: 220 SKSPNSTSRDKIVVETGENR--QFIHINEPPIIVQEHDSQPQEKVV 351
S SP TS + I+ ++ R Q PIIV+ +D PQ K++
Sbjct: 64 SSSPRPTSSNSIIQKSDGKRKDQKNEKQASPIIVEVYDDTPQSKLL 109
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 27.1 bits (57), Expect = 4.2
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 110 RYFSLKMDMNNPPNQSYWFVLREDQSN 190
+ FS+ +M+ PP YW + E +SN
Sbjct: 304 KQFSIPHNMDRPPAPRYWIIDNEVRSN 330
>AL117195-21|CAB55033.2| 313|Caenorhabditis elegans Hypothetical
protein Y57A10A.28 protein.
Length = 313
Score = 27.1 bits (57), Expect = 4.2
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = -2
Query: 362 FSSTTTFSCGWLSCSCTIIGGSFMWINCLFSPV 264
FS FSC WLSC GSF+ L P+
Sbjct: 54 FSRKHPFSC-WLSCMLMSFAGSFLSCFLLGEPI 85
>Z69637-2|CAA93466.1| 199|Caenorhabditis elegans Hypothetical
protein F35G2.2 protein.
Length = 199
Score = 26.6 bits (56), Expect = 5.5
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = -1
Query: 141 LFISIFNEKYLNNYKYLHDSVLKNRRIVFSMKTL 40
LF+ EK+ +N KY + + +RR++ + + L
Sbjct: 17 LFVCDLQEKFASNIKYFPEIITTSRRLIDAARIL 50
>U61949-8|AAU05569.1| 332|Caenorhabditis elegans Hypothetical
protein F49E8.7b protein.
Length = 332
Score = 26.2 bits (55), Expect = 7.3
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -2
Query: 368 DVFSSTTTFSCGWLS-CSCTIIGGSFMWINC 279
DVF+STT F+C C +G + +NC
Sbjct: 147 DVFTSTTLFNCPLFDRCEPVCLGDEEIILNC 177
>U61949-7|AAB03155.1| 510|Caenorhabditis elegans Hypothetical
protein F49E8.7a protein.
Length = 510
Score = 26.2 bits (55), Expect = 7.3
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -2
Query: 368 DVFSSTTTFSCGWLS-CSCTIIGGSFMWINC 279
DVF+STT F+C C +G + +NC
Sbjct: 325 DVFTSTTLFNCPLFDRCEPVCLGDEEIILNC 355
>U23525-5|AAC46568.1| 465|Caenorhabditis elegans Yeast smf
(divalent cation transporter)homolog protein 2 protein.
Length = 465
Score = 26.2 bits (55), Expect = 7.3
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -1
Query: 135 ISIFNEKYLNNYKYLHDSVLKNRRIVFSMKT 43
ISIF + + YLH +++K+R++ S KT
Sbjct: 178 ISIFGAVIMPHNFYLHSALVKSRKVDRSSKT 208
>Z71266-8|CAA95846.2| 729|Caenorhabditis elegans Hypothetical
protein R06C7.9 protein.
Length = 729
Score = 25.8 bits (54), Expect = 9.7
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -2
Query: 329 LSCSCTIIGGSFMWINCL 276
++CSC+I G F I CL
Sbjct: 174 VNCSCSICGSKFSTIRCL 191
>Z68299-2|CAA92611.2| 344|Caenorhabditis elegans Hypothetical
protein T04B2.4 protein.
Length = 344
Score = 25.8 bits (54), Expect = 9.7
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = -2
Query: 311 IIGGSFMWINCLF 273
+IGG F+++NCLF
Sbjct: 205 VIGGVFLFVNCLF 217
>U39851-2|AAF99874.1| 540|Caenorhabditis elegans Hypothetical
protein C23G10.6 protein.
Length = 540
Score = 25.8 bits (54), Expect = 9.7
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -1
Query: 129 IFNEKYLNNYKYLHDSVLKNR 67
++NEKY N KYL D +L+N+
Sbjct: 442 LYNEKYKRNAKYLAD-ILENQ 461
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,091,135
Number of Sequences: 27780
Number of extensions: 155383
Number of successful extensions: 401
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 401
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 524900642
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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