Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0387
         (399 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       21   5.2  
DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    20   9.1  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    20   9.1  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    20   9.1  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    20   9.1  

>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 190 KSIAILNVQEILKDMASQGDYAVKHQR 270
           + I   ++  ILK + + G  +V HQR
Sbjct: 291 QQIVKFSLNSILKTVVAYGGTSVMHQR 317


>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 61  TSAYAAPSVTINQYSDNEIPRDIDD 135
           TS  ++ SV   +  DNEIP++  D
Sbjct: 147 TSTQSSRSVESVEDFDNEIPKNQGD 171


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 61  TSAYAAPSVTINQYSDNEIPRDIDD 135
           TS  ++ SV   +  DNEIP++  D
Sbjct: 195 TSTQSSRSVESVEDFDNEIPKNQGD 219


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 61  TSAYAAPSVTINQYSDNEIPRDIDD 135
           TS  ++ SV   +  DNEIP++  D
Sbjct: 195 TSTQSSRSVESVEDFDNEIPKNQGD 219


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 61  TSAYAAPSVTINQYSDNEIPRDIDD 135
           TS  ++ SV   +  DNEIP++  D
Sbjct: 195 TSTQSSRSVESVEDFDNEIPKNQGD 219


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.316    0.131    0.382 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,616
Number of Sequences: 438
Number of extensions: 2328
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9885360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)