Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0387
(399 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g45330.1 68416.m04894 lectin protein kinase family protein co... 36 0.013
At5g14920.1 68418.m01750 gibberellin-regulated family protein si... 29 0.86
At2g29690.1 68415.m03609 anthranilate synthase, alpha subunit, c... 29 0.86
At5g53210.1 68418.m06614 basic helix-loop-helix (bHLH) family pr... 29 1.5
At3g20310.1 68416.m02573 ethylene-responsive element-binding fam... 29 1.5
At5g66640.1 68418.m08399 LIM domain-containing protein-related c... 28 2.0
At3g12200.1 68416.m01521 protein kinase family protein contains ... 28 2.6
At3g45220.1 68416.m04880 serpin, putative / serine protease inhi... 27 3.5
At3g23530.1 68416.m02961 cyclopropane fatty acid synthase, putat... 27 3.5
At3g23510.1 68416.m02960 cyclopropane fatty acid synthase, putat... 27 3.5
At1g04150.1 68414.m00405 C2 domain-containing protein contains I... 27 3.5
At5g43560.2 68418.m05326 meprin and TRAF homology domain-contain... 27 4.6
At5g43560.1 68418.m05325 meprin and TRAF homology domain-contain... 27 4.6
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 27 4.6
At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibit... 27 4.6
At2g26180.1 68415.m03144 calmodulin-binding family protein low s... 27 6.1
At5g65850.1 68418.m08287 F-box family protein 26 8.0
At1g12040.1 68414.m01390 leucine-rich repeat family protein / ex... 26 8.0
>At3g45330.1 68416.m04894 lectin protein kinase family protein
contains Serine/Threonine protein kinases active-site
signature, Prosite:PS00108; contains Pfam profiles
PF00069: Protein kinase domain, PF00139: Legume lectins
beta domain, PF00138: Legume lectins alpha domain
Length = 682
Score = 35.5 bits (78), Expect = 0.013
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +1
Query: 211 VQEILKDMASQGDYAVKHQRWPKPPELSP---IYLPVSPVMPVQPLTSLTLTQTASGPET 381
+ E +M Y +HQR P+ +P + PV +P +TS ++T + SGP
Sbjct: 602 IPEARPNMEQVVQYINRHQRLPEFSPNTPGIGVSTPVLMGLPSLAITSSSVTSSVSGPSA 661
Query: 382 SPASDN 399
SP+S N
Sbjct: 662 SPSSAN 667
>At5g14920.1 68418.m01750 gibberellin-regulated family protein
similar to SP|P46689 Gibberellin-regulated protein 1
precursor {Arabidopsis thaliana}; contains Pfam profile
PF02704: Gibberellin regulated protein
Length = 275
Score = 29.5 bits (63), Expect = 0.86
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Frame = +1
Query: 277 KPPELSPIYLPVSPVM---PVQPLTSLTLTQTASGPETSP 387
KPP SP+ P +P + PVQP T T P T+P
Sbjct: 132 KPPTTSPVKPPTTPPVQSPPVQPPTYKPPTSPVKPPTTTP 171
>At2g29690.1 68415.m03609 anthranilate synthase, alpha subunit,
component I-2 (ASA2) identical to SP|P32069
Length = 621
Score = 29.5 bits (63), Expect = 0.86
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +1
Query: 196 IAILNVQEILKDMASQGDYAVKHQRWPKPPELSPIYLPVSPVMPVQPLTSLTL 354
++ +++ + D + AV H R P PP + P+S P P TSL L
Sbjct: 1 MSAVSISAVKSDFFTVEAIAVTHHRTPHPPHFPSLRFPLSLKSP--PATSLNL 51
>At5g53210.1 68418.m06614 basic helix-loop-helix (bHLH) family
protein contains similarity to helix-loop-helix
DNA-binding protein
Length = 294
Score = 28.7 bits (61), Expect = 1.5
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +1
Query: 136 GKASSVISRAWDYVDDTDKSIAILNVQEILKDMASQGDYAVKHQRWPKPPELSPIYLPVS 315
G +S+I +Y+ + + + L ++ K A V P PP LSP P+S
Sbjct: 134 GDQASIIGGVVEYISELQQVLQSLEAKKQRKTYAEVLSPRVVPSPRPSPPVLSPRKPPLS 193
Query: 316 PV 321
P+
Sbjct: 194 PL 195
>At3g20310.1 68416.m02573 ethylene-responsive element-binding family
protein similar to SP|O80339 Ethylene responsive element
binding factor 3 (AtERF3) {Arabidopsis thaliana};
contains Pfam profile PF00847: AP2 domain
Length = 244
Score = 28.7 bits (61), Expect = 1.5
Identities = 23/66 (34%), Positives = 27/66 (40%)
Frame = +1
Query: 178 DDTDKSIAILNVQEILKDMASQGDYAVKHQRWPKPPELSPIYLPVSPVMPVQPLTSLTLT 357
D KS L + D A D A ++ R PK PI SP P+QPLT L
Sbjct: 44 DPLKKSRVWLGTFDSAVDAARAYDTAARNLRGPKAKTNFPI--DCSPSSPLQPLTYLHNQ 101
Query: 358 QTASGP 375
S P
Sbjct: 102 NLCSPP 107
>At5g66640.1 68418.m08399 LIM domain-containing protein-related
contains low similarity to Pfam profile PF00412: LIM
domain
Length = 450
Score = 28.3 bits (60), Expect = 2.0
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = -3
Query: 199 RCFC--QCHRRSPMHVRLRN*LFHHQCRVEFH 110
RC C CHR MH L+ FH C E++
Sbjct: 95 RCLCCFHCHRPFVMHEILKKGKFHIDCYKEYY 126
>At3g12200.1 68416.m01521 protein kinase family protein contains
protein kinase domain, Pfam:PF00069; contains
serine/threonine protein kinase domain,
INTERPRO:IPR002290
Length = 571
Score = 27.9 bits (59), Expect = 2.6
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 289 LSPIYLPVSPVMPV 330
LSPIYLPV P+ PV
Sbjct: 283 LSPIYLPVFPIKPV 296
>At3g45220.1 68416.m04880 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 393
Score = 27.5 bits (58), Expect = 3.5
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 145 SSVISRAWDYVDDTDKSIAILNVQEILKDMASQGDYAVKH 264
S+V +A VD+ A ++V + KDM GD+ H
Sbjct: 328 SNVFHKACIEVDEEGTEAAAVSVASMTKDMLLMGDFVADH 367
>At3g23530.1 68416.m02961 cyclopropane fatty acid synthase, putative
/ CPA-FA synthase, putative similar to cyclopropane
synthase [Sterculia foetida] GI:21069167; contains Pfam
profiles PF02353: Cyclopropane-fatty-acyl-phospholipid
synthase, PF01593: amine oxidase, flavin-containing
Length = 867
Score = 27.5 bits (58), Expect = 3.5
Identities = 12/50 (24%), Positives = 24/50 (48%)
Frame = +1
Query: 100 YSDNEIPRDIDDGKASSVISRAWDYVDDTDKSIAILNVQEILKDMASQGD 249
YSD + DID + AW+++ T+K + + IL+++ +
Sbjct: 297 YSDIYLHHDIDLMPRNQAAWSAWNFLGSTEKKVCVTYWLNILQNLGENSE 346
>At3g23510.1 68416.m02960 cyclopropane fatty acid synthase, putative
/ CPA-FA synthase, putative similar to cyclopropane
synthase [Sterculia foetida] GI:21069167; contains Pfam
profile PF02353: Cyclopropane-fatty-acyl-phospholipid
synthase
Length = 867
Score = 27.5 bits (58), Expect = 3.5
Identities = 12/50 (24%), Positives = 24/50 (48%)
Frame = +1
Query: 100 YSDNEIPRDIDDGKASSVISRAWDYVDDTDKSIAILNVQEILKDMASQGD 249
YSD + DID + AW+++ T+K + + IL+++ +
Sbjct: 297 YSDIYLHHDIDLMPRNKAAWSAWNFLGSTEKKVCVTYWLNILQNLGENSE 346
>At1g04150.1 68414.m00405 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 1012
Score = 27.5 bits (58), Expect = 3.5
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = +1
Query: 100 YSDNEIPRDIDDGKASSVISRAWDYVD---DTDKSIAILNVQEILKDMASQGDYAVKHQR 270
+++ P ++D+ + SR +D V D +SIA VQ ++ DMASQG+
Sbjct: 888 HAETVFPDELDEEFDTFPTSRGFDVVRMRYDRVRSIAG-RVQTVVGDMASQGERVQALLS 946
Query: 271 WPKP 282
W P
Sbjct: 947 WRDP 950
>At5g43560.2 68418.m05326 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein weak similarity
to ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 1055
Score = 27.1 bits (57), Expect = 4.6
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +1
Query: 274 PKPPELSPIYLPVSPVMPVQPLTSLTLTQTAS 369
P PP P+ P+ P P+ S T TAS
Sbjct: 759 PAPPMSRPLSAPIIPPTQAAPVISAVQTSTAS 790
>At5g43560.1 68418.m05325 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein weak similarity
to ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 1055
Score = 27.1 bits (57), Expect = 4.6
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +1
Query: 274 PKPPELSPIYLPVSPVMPVQPLTSLTLTQTAS 369
P PP P+ P+ P P+ S T TAS
Sbjct: 759 PAPPMSRPLSAPIIPPTQAAPVISAVQTSTAS 790
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 27.1 bits (57), Expect = 4.6
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +1
Query: 280 PPELSPIYLPVSPVM--PVQPLTSLTLTQTASGPETSPAS 393
PP SPIY P PV P +P+T L + +P+S
Sbjct: 802 PPPPSPIYSPPPPVFSPPPKPVTPLPPATSPMANAPTPSS 841
>At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibitor
family protein low similarity to extensin [Volvox
carteri] GI:21992
Length = 312
Score = 27.1 bits (57), Expect = 4.6
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 274 PKPPELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPAS 393
P P LSP P P PL+SL+ + + S P +SP+S
Sbjct: 58 PPPLSLSPSSPPPPPPSS-SPLSSLSPSLSPSPPSSSPSS 96
>At2g26180.1 68415.m03144 calmodulin-binding family protein low
similarity to SF16 protein [Helianthus annuus]
GI:560150; contains Pfam profile PF00612: IQ
calmodulin-binding motif
Length = 416
Score = 26.6 bits (56), Expect = 6.1
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -2
Query: 392 EAGEVSGPDAVCVRVNDVSGCTGITGD 312
E E SG ++C VSG TG+ D
Sbjct: 313 EFNESSGSSSICTSTTPVSGKTGLVSD 339
>At5g65850.1 68418.m08287 F-box family protein
Length = 392
Score = 26.2 bits (55), Expect = 8.0
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +1
Query: 133 DGKASSVISRAWDYVDDTDKSIAILNVQEILKDMASQGDYAV 258
+GK +S++S + +VD KSI + +Q+ K S+ Y +
Sbjct: 271 NGKLASLVSERYCFVDGRSKSIELWVLQDAEKKEWSKHTYVL 312
>At1g12040.1 68414.m01390 leucine-rich repeat family protein /
extensin family protein (LRX1) similar to extensin-like
protein [Lycopersicon esculentum]
gi|5917664|gb|AAD55979; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 744
Score = 26.2 bits (55), Expect = 8.0
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +1
Query: 274 PKPPELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSP 387
P PP SP+Y P P P T S P SP
Sbjct: 625 PSPPPPSPVYYPPVTPSPPPPSPVYYPPVTPSPPPPSP 662
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.316 0.131 0.382
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,732,568
Number of Sequences: 28952
Number of extensions: 174478
Number of successful extensions: 706
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 661
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 704
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 575830496
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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