Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0385
         (499 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0021 + 11307795-11308093,11308454-11308556,11309623-113099...    37   0.010
03_05_0586 - 25875703-25876332,25876426-25876713,25877064-258771...    30   1.2  
03_05_0756 + 27469002-27469107,27469200-27469369,27470210-274710...    29   1.6  
06_01_0574 + 4051723-4051805,4051913-4052366                           28   4.8  
01_06_1612 - 38635703-38636215,38638725-38638967                       27   6.3  
03_05_0431 + 24221881-24224586                                         27   8.4  

>08_02_0021 +
           11307795-11308093,11308454-11308556,11309623-11309931,
           11310190-11310618
          Length = 379

 Score = 36.7 bits (81), Expect = 0.010
 Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
 Frame = +1

Query: 205 SEEDWHKTRNSF*SIGTRSPGRGELYNGYSGREHRTSHPLEAAADRR-NPQVRRQGPH-D 378
           S ++W   R SF     R  GRG ++  Y GR+ R   P    A RR  P      PH  
Sbjct: 120 SMQEWSSERCSFVQEALRGSGRGHIWAFYRGRQRRLGPPPPLPARRRLGPPPPVLVPHTP 179

Query: 379 VSAQSSAPPGLR 414
            SA +++ P LR
Sbjct: 180 ASAAAASHPRLR 191


>03_05_0586 -
           25875703-25876332,25876426-25876713,25877064-25877194,
           25877299-25877812
          Length = 520

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 19/57 (33%), Positives = 23/57 (40%), Gaps = 12/57 (21%)
 Frame = +2

Query: 173 HGPHQPRPSFGQRKTG------------TRRGILFRASERDHQDAANSIMGIVVENI 307
           HGPH P P FG+   G             R G L+ A  R   D A   + + V NI
Sbjct: 253 HGPHWPLPPFGESSRGPFNILEQRPRFANRHGRLYEADARSFHDLAEHDIRVAVVNI 309


>03_05_0756 +
           27469002-27469107,27469200-27469369,27470210-27471001,
           27471182-27471398,27471972-27472150,27472592-27472833,
           27473662-27474052
          Length = 698

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 15/67 (22%), Positives = 27/67 (40%)
 Frame = -1

Query: 418 WGVVLAEQNSGQRHRVDPVSVLEDSVDQLRLPVDVRFDVLDHYTHYRVRRVLVISFRCSK 239
           W   + EQ SG   + D  S   D  D++    +     +  +  +       +S+ C +
Sbjct: 245 WLATVPEQGSGGILQFDEASPFIDLTDEVHFDSEFGLMGIAFHPKFATNGRFFVSYNCDR 304

Query: 238 KNSSSCA 218
             SS+CA
Sbjct: 305 TQSSNCA 311


>06_01_0574 + 4051723-4051805,4051913-4052366
          Length = 178

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +1

Query: 325 EAAADRRNPQVRRQGPHDVSAQSSAPP 405
           EAA     P+VR   PHDV+ +++ PP
Sbjct: 49  EAARIMCGPRVRTNFPHDVADEAAPPP 75


>01_06_1612 - 38635703-38636215,38638725-38638967
          Length = 251

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 10/24 (41%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
 Frame = -3

Query: 425 ISLGRSPGGAEL--WAETSCGPCL 360
           + LG++  G +L  W E +CGPC+
Sbjct: 177 VHLGQAAAGHDLEAWVERTCGPCV 200


>03_05_0431 + 24221881-24224586
          Length = 901

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -1

Query: 262 VISFRCSKKNSSSCASLPLTEARTRLMRSMYF 167
           V  F CSK  S  C S  L++ RT+  + M F
Sbjct: 388 VCQFDCSKCASDECVSFCLSQKRTKNRKFMAF 419


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,283,834
Number of Sequences: 37544
Number of extensions: 205823
Number of successful extensions: 728
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 719
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 728
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1047416480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)