Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0385
(499 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_28941| Best HMM Match : PI3_PI4_kinase (HMM E-Value=2.8026e-45) 29 1.6
SB_48429| Best HMM Match : PI3_PI4_kinase (HMM E-Value=7.7e-09) 29 1.6
SB_55162| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_4089| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_947| Best HMM Match : Phage_term_smal (HMM E-Value=2.8) 28 3.7
SB_33973| Best HMM Match : ABC_tran (HMM E-Value=0) 28 4.9
SB_51745| Best HMM Match : DPRP (HMM E-Value=0.33) 27 6.5
SB_35583| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.5
SB_34676| Best HMM Match : Peptidase_A17 (HMM E-Value=2.4e-13) 27 6.5
SB_51743| Best HMM Match : DPRP (HMM E-Value=0.4) 27 6.5
SB_40159| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.5
SB_24095| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.5
SB_1692| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.5
SB_31180| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_611| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
>SB_28941| Best HMM Match : PI3_PI4_kinase (HMM E-Value=2.8026e-45)
Length = 2022
Score = 29.5 bits (63), Expect = 1.6
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 292 SGREHRTSHPLEAAADRRNPQVRRQGPHD 378
SG+ TSHPL + + + Q++RQ HD
Sbjct: 1862 SGQVCNTSHPLHSLQAKFDEQIKRQADHD 1890
>SB_48429| Best HMM Match : PI3_PI4_kinase (HMM E-Value=7.7e-09)
Length = 1423
Score = 29.5 bits (63), Expect = 1.6
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 292 SGREHRTSHPLEAAADRRNPQVRRQGPHD 378
SG+ TSHPL + + + Q++RQ HD
Sbjct: 250 SGQVCNTSHPLHSLQAKFDEQIKRQADHD 278
>SB_55162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 108
Score = 29.1 bits (62), Expect = 2.1
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 425 ISLGRSPGGAELWAETSCGP 366
+ L R+P G +W TSCGP
Sbjct: 28 LPLRRTPDGCAIWDHTSCGP 47
>SB_4089| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 289
Score = 28.7 bits (61), Expect = 2.8
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 5/38 (13%)
Frame = +2
Query: 329 PQLIDGILKYGDRVHTMSLP-----RVLLRQDYAPTRL 427
PQL+DG+L+ G R+ LP V+L Y TRL
Sbjct: 176 PQLVDGMLRVGGRIDRADLPWEVKHPVILDHGYDVTRL 213
>SB_947| Best HMM Match : Phage_term_smal (HMM E-Value=2.8)
Length = 237
Score = 28.3 bits (60), Expect = 3.7
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 329 PQLIDGILKYGDRVHTMSLP 388
PQL+DG+L+ G R+ LP
Sbjct: 124 PQLVDGVLRVGGRIDKADLP 143
>SB_33973| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1184
Score = 27.9 bits (59), Expect = 4.9
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 293 VVENIEPHIHWKPQLIDGILKYGDRVHTMSLPRVLLRQD 409
VVEN+E +H+K L G+R + L RVLLR++
Sbjct: 1088 VVENLESRLHYKLMDEGSNLSLGER-QLICLARVLLRKN 1125
>SB_51745| Best HMM Match : DPRP (HMM E-Value=0.33)
Length = 352
Score = 27.5 bits (58), Expect = 6.5
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 329 PQLIDGILKYGDRVHTMSLP 388
PQL+DG+L+ G R+ +P
Sbjct: 220 PQLVDGVLRVGGRIDRADIP 239
>SB_35583| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 989
Score = 27.5 bits (58), Expect = 6.5
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 329 PQLIDGILKYGDRVHTMSLP 388
PQL+DG+L+ G R+ +P
Sbjct: 727 PQLVDGVLRVGGRIDRADIP 746
>SB_34676| Best HMM Match : Peptidase_A17 (HMM E-Value=2.4e-13)
Length = 1012
Score = 27.5 bits (58), Expect = 6.5
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 329 PQLIDGILKYGDRVHTMSLP 388
PQL+DG+L+ G R+ +P
Sbjct: 945 PQLVDGVLRVGGRIDRADIP 964
>SB_51743| Best HMM Match : DPRP (HMM E-Value=0.4)
Length = 281
Score = 27.5 bits (58), Expect = 6.5
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 329 PQLIDGILKYGDRVHTMSLP 388
PQL+DG+L+ G R+ +P
Sbjct: 233 PQLVDGVLRVGGRIDRADIP 252
>SB_40159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1497
Score = 27.5 bits (58), Expect = 6.5
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 329 PQLIDGILKYGDRVHTMSLP 388
PQL+DG+L+ G R+ +P
Sbjct: 1144 PQLVDGVLRVGGRIDRADIP 1163
>SB_24095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1162
Score = 27.5 bits (58), Expect = 6.5
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 329 PQLIDGILKYGDRVHTMSLP 388
PQL+DG+L+ G R+ +P
Sbjct: 901 PQLVDGVLRVGGRIDRADIP 920
>SB_1692| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 190
Score = 27.5 bits (58), Expect = 6.5
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 329 PQLIDGILKYGDRVHTMSLP 388
PQL+DG+L+ G R+ +P
Sbjct: 150 PQLVDGVLRVGGRIDRADIP 169
>SB_31180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 407
Score = 27.1 bits (57), Expect = 8.6
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = -1
Query: 319 DVRFDVLDHYTHYRVRRVLVISFRCSKKNS 230
D R ++ +VRR+++ +F C+K N+
Sbjct: 373 DFRINIAKEVKFAKVRRIIIDNFHCNKSNN 402
>SB_611| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 298
Score = 27.1 bits (57), Expect = 8.6
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = -3
Query: 134 ALFFIFFTAVSRVISRARPLLLQNRTKLILHGNTIQLVRC 15
A+F I F A+ R +S RPL + RT+ HG I LV C
Sbjct: 65 AVFIITFIAIDRYLSVVRPLTGRIRTR---HGKWI-LVFC 100
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,679,693
Number of Sequences: 59808
Number of extensions: 217616
Number of successful extensions: 647
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 647
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1075029208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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