Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0385
         (499 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D87468-1|BAA19667.1|  460|Homo sapiens KIAA0278 protein.               31   2.9  
AK131107-1|BAC85157.1|  597|Homo sapiens FLJ00408 protein protein.     29   6.8  
AJ131187-1|CAA10317.1| 1685|Homo sapiens APC2 protein protein.         29   6.8  
AB022529-1|BAA75469.1| 2303|Homo sapiens APCL protein.                 29   6.8  
AB012162-1|BAA34611.1| 2303|Homo sapiens APCL protein protein.         29   6.8  

>D87468-1|BAA19667.1|  460|Homo sapiens KIAA0278 protein.
          Length = 460

 Score = 30.7 bits (66), Expect = 2.9
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = +1

Query: 328 AAADRRNPQVRRQGPHDVSAQSSAPPGLRPNE 423
           AA DRR+PQ+ R GP      S+ PP +RP E
Sbjct: 25  AATDRRSPQL-RTGPRPPD-PSAGPPSVRPEE 54


>AK131107-1|BAC85157.1|  597|Homo sapiens FLJ00408 protein protein.
          Length = 597

 Score = 29.5 bits (63), Expect = 6.8
 Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
 Frame = +1

Query: 247 IGTRSPGRGELYNGYSGREHRTSHPLEAAADRRNPQVRRQGPHDV---SAQSSAPPGLRP 417
           IGT +P R ++ +G      R   P    +    P+V+R+G       S+ S +PP L P
Sbjct: 247 IGTPAPARHKIVSGLREEILRLRFPHRVQSKEPTPKVKRKGLGGAGGGSSPSKSPPVLGP 306

Query: 418 NEII 429
            + +
Sbjct: 307 QQAL 310


>AJ131187-1|CAA10317.1| 1685|Homo sapiens APC2 protein protein.
          Length = 1685

 Score = 29.5 bits (63), Expect = 6.8
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = +1

Query: 304  HRTSHPLEAAADRRNPQVRRQGPHDVSAQSSAPPGLR--PNEIIDQ 435
            HR +  +  A  R  PQ R++ P    A  +APP  R  P+ I D+
Sbjct: 909  HRRTSAIPRAFTRERPQGRKEAPAPSKAAPAAPPPARTQPSLIADE 954


>AB022529-1|BAA75469.1| 2303|Homo sapiens APCL protein.
          Length = 2303

 Score = 29.5 bits (63), Expect = 6.8
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = +1

Query: 304  HRTSHPLEAAADRRNPQVRRQGPHDVSAQSSAPPGLR--PNEIIDQ 435
            HR +  +  A  R  PQ R++ P    A  +APP  R  P+ I D+
Sbjct: 1527 HRRTSAIPRAFTRERPQGRKEAPAPSKAAPAAPPPARTQPSLIADE 1572


>AB012162-1|BAA34611.1| 2303|Homo sapiens APCL protein protein.
          Length = 2303

 Score = 29.5 bits (63), Expect = 6.8
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = +1

Query: 304  HRTSHPLEAAADRRNPQVRRQGPHDVSAQSSAPPGLR--PNEIIDQ 435
            HR +  +  A  R  PQ R++ P    A  +APP  R  P+ I D+
Sbjct: 1527 HRRTSAIPRAFTRERPQGRKEAPAPSKAAPAAPPPARTQPSLIADE 1572


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,177,964
Number of Sequences: 237096
Number of extensions: 1032629
Number of successful extensions: 3633
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3633
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4536472160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)