Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0385
         (499 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   1.3  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    22   3.1  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   5.4  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   9.4  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   9.4  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 265 GRGELYNGYSGREHRTSHPL 324
           GRG ++ G+  RE  + +PL
Sbjct: 53  GRGTIFEGHDDREQPSVYPL 72


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 308 EPHIHWKPQLIDGI 349
           + H+ WKP   DGI
Sbjct: 101 DSHLSWKPSDFDGI 114


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 10/33 (30%), Positives = 14/33 (42%)
 Frame = +1

Query: 337  DRRNPQVRRQGPHDVSAQSSAPPGLRPNEIIDQ 435
            D+R     R      S+Q   P  +R   +IDQ
Sbjct: 1299 DQRAMTEARNQQQQASSQQQIPESMRSKALIDQ 1331



 Score = 21.4 bits (43), Expect = 5.4
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -1

Query: 424  SRWGVVLAEQNSGQRHRVDPVSVLEDSVDQ 335
            +R G     Q   Q+   +PV  +EDSV+Q
Sbjct: 1569 NRSGEQANSQQQQQQQSGEPVIGMEDSVEQ 1598


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +1

Query: 325 EAAADRRNPQVRRQGPHDVSAQSSAPP 405
           E++ D RNP +    P++      +PP
Sbjct: 879 ESSTDSRNPALALAEPYNQRGTVVSPP 905


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +1

Query: 325 EAAADRRNPQVRRQGPHDVSAQSSAPP 405
           E++ D RNP +    P++      +PP
Sbjct: 917 ESSTDSRNPALALAEPYNQRGTVVSPP 943


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,998
Number of Sequences: 438
Number of extensions: 2175
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13618701
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)