Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0384
(499 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 171 2e-43
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 171 3e-43
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 169 1e-42
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 149 1e-36
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 126 1e-29
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 101 2e-22
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 2e-20
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 95 2e-20
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 95 2e-20
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 95 4e-20
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 9e-20
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 1e-19
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 93 2e-19
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 2e-18
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 87 6e-18
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 65 3e-11
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 1e-10
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 61 6e-10
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 55 3e-08
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 53 2e-07
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 51 5e-07
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 43 2e-04
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 41 5e-04
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.008
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.70
SB_55131| Best HMM Match : fn3 (HMM E-Value=0.0083) 30 1.2
SB_50693| Best HMM Match : C2 (HMM E-Value=0) 29 1.6
SB_17458| Best HMM Match : Metalloenzyme (HMM E-Value=0.29) 29 2.8
SB_25442| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_34911| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_23752| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.5
SB_47472| Best HMM Match : zf-CXXC (HMM E-Value=5.9) 27 8.6
SB_46977| Best HMM Match : Cu_amine_oxid (HMM E-Value=3.9e-09) 27 8.6
SB_34195| Best HMM Match : Init_tRNA_PT (HMM E-Value=2.7) 27 8.6
SB_26176| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_4771| Best HMM Match : DEAD (HMM E-Value=0.015) 27 8.6
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 171 bits (417), Expect = 2e-43
Identities = 78/80 (97%), Positives = 80/80 (100%)
Frame = +2
Query: 257 RINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 436
RINVYYNEA+GGKYVPRAV+VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH
Sbjct: 259 RINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 318
Query: 437 YTEGAELVDSVLDVVRKEAE 496
YTEGAELVDSVLDVVRKEAE
Sbjct: 319 YTEGAELVDSVLDVVRKEAE 338
Score = 90.6 bits (215), Expect = 6e-19
Identities = 40/44 (90%), Positives = 40/44 (90%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL 254
MREIVH QAGQCGNQIGAKFWEVISDEHGID TG Y GDSDLQL
Sbjct: 214 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL 257
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 171 bits (416), Expect = 3e-43
Identities = 77/80 (96%), Positives = 80/80 (100%)
Frame = +2
Query: 257 RINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 436
RINVYYNEA+GGKYVPRA++VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH
Sbjct: 46 RINVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 105
Query: 437 YTEGAELVDSVLDVVRKEAE 496
YTEGAELVDSVLDVVRKEAE
Sbjct: 106 YTEGAELVDSVLDVVRKEAE 125
Score = 90.6 bits (215), Expect = 6e-19
Identities = 40/44 (90%), Positives = 40/44 (90%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL 254
MREIVH QAGQCGNQIGAKFWEVISDEHGID TG Y GDSDLQL
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL 44
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 169 bits (410), Expect = 1e-42
Identities = 75/80 (93%), Positives = 80/80 (100%)
Frame = +2
Query: 257 RINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 436
RINVYYNEA+GGKYVPR+V++DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH
Sbjct: 46 RINVYYNEATGGKYVPRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 105
Query: 437 YTEGAELVDSVLDVVRKEAE 496
YTEGAEL+DSVLDVVRKEAE
Sbjct: 106 YTEGAELMDSVLDVVRKEAE 125
Score = 88.2 bits (209), Expect = 3e-18
Identities = 39/44 (88%), Positives = 40/44 (90%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL 254
MREIV +QAGQCGNQIGAKFWEVISDEHGID TG Y GDSDLQL
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL 44
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 149 bits (362), Expect = 1e-36
Identities = 68/69 (98%), Positives = 69/69 (100%)
Frame = +2
Query: 290 GKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 469
GKYVPRAV+VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV
Sbjct: 2 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 61
Query: 470 LDVVRKEAE 496
LDVVRKEAE
Sbjct: 62 LDVVRKEAE 70
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 126 bits (304), Expect = 1e-29
Identities = 52/71 (73%), Positives = 64/71 (90%)
Frame = +2
Query: 284 SGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 463
+GG+YVPR+++VDLEPGTMD+VR GP G +FRPDNFV QSGA NNWAKGHY+EGAEL+D
Sbjct: 11 TGGRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELID 70
Query: 464 SVLDVVRKEAE 496
++ DV+RKEAE
Sbjct: 71 NIFDVLRKEAE 81
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 101 bits (243), Expect = 2e-22
Identities = 44/47 (93%), Positives = 47/47 (100%)
Frame = +2
Query: 257 RINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVF 397
RINVYYNEA+GGKYVPRA++VDLEPGTMDSVRSGPFGQIFRPDNFVF
Sbjct: 46 RINVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 92
Score = 90.6 bits (215), Expect = 6e-19
Identities = 40/44 (90%), Positives = 40/44 (90%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL 254
MREIVH QAGQCGNQIGAKFWEVISDEHGID TG Y GDSDLQL
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL 44
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 95.5 bits (227), Expect = 2e-20
Identities = 39/79 (49%), Positives = 57/79 (72%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 442
N +++E GK+VPRAV DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT
Sbjct: 50 NTFFSETGSGKHVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 109
Query: 443 EGAELVDSVLDVVRKEAEG 499
G E++D+VLD +RK A+G
Sbjct: 110 VGKEMIDTVLDRLRKLADG 128
Score = 37.1 bits (82), Expect = 0.008
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 248
MRE + + GQ G Q+G WE+ EHGI G D +
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTI 42
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 95.5 bits (227), Expect = 2e-20
Identities = 41/78 (52%), Positives = 56/78 (71%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 442
N +++E GK+VPRAV VDLEP +D VR+G + Q+F P+ V G+ A NN+A+GHYT
Sbjct: 50 NTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYT 109
Query: 443 EGAELVDSVLDVVRKEAE 496
G E+VD VLD +RK A+
Sbjct: 110 VGKEIVDLVLDRIRKLAD 127
Score = 95.1 bits (226), Expect = 3e-20
Identities = 40/78 (51%), Positives = 56/78 (71%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 442
N +++E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT
Sbjct: 483 NTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 542
Query: 443 EGAELVDSVLDVVRKEAE 496
G E+VD VLD +RK A+
Sbjct: 543 VGKEIVDLVLDRIRKLAD 560
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/42 (42%), Positives = 21/42 (50%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 248
MRE + I GQ G QIG WE+ EHGI G D +
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 42
Score = 36.7 bits (81), Expect = 0.011
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 126 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 248
RE + I GQ G QIG WE+ EHGI G D +
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 475
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 95.5 bits (227), Expect = 2e-20
Identities = 40/78 (51%), Positives = 56/78 (71%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 442
N +++E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT
Sbjct: 635 NTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 694
Query: 443 EGAELVDSVLDVVRKEAE 496
G EL+D VLD +RK A+
Sbjct: 695 VGKELIDLVLDRIRKLAD 712
Score = 94.7 bits (225), Expect = 4e-20
Identities = 40/78 (51%), Positives = 56/78 (71%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 442
N +++E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT
Sbjct: 114 NTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 173
Query: 443 EGAELVDSVLDVVRKEAE 496
G E+VD VLD +RK A+
Sbjct: 174 IGKEIVDLVLDRIRKLAD 191
Score = 37.1 bits (82), Expect = 0.008
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 120 IMREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 248
+ RE + + GQ G QIG WE+ EHGI G D +
Sbjct: 64 LQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 106
Score = 37.1 bits (82), Expect = 0.008
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSV 349
N +++E GK+VPRAV VDLEP + +
Sbjct: 562 NTFFSETGAGKHVPRAVFVDLEPTVRECI 590
Score = 37.1 bits (82), Expect = 0.008
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 248
+RE + I GQ G QIG WE+ EHGI G D +
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 627
Score = 36.7 bits (81), Expect = 0.011
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 126 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 248
RE + I GQ G QIG WE+ EHGI G D +
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 554
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 94.7 bits (225), Expect = 4e-20
Identities = 39/78 (50%), Positives = 56/78 (71%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 442
N +++E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT
Sbjct: 49 NTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 108
Query: 443 EGAELVDSVLDVVRKEAE 496
G E++D VLD +RK A+
Sbjct: 109 VGKEIIDLVLDRIRKLAD 126
Score = 36.7 bits (81), Expect = 0.011
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 126 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 248
RE + I GQ G QIG WE+ EHGI G D +
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 41
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 93.5 bits (222), Expect = 9e-20
Identities = 40/79 (50%), Positives = 55/79 (69%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 442
N ++ E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT
Sbjct: 421 NTFFAETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 480
Query: 443 EGAELVDSVLDVVRKEAEG 499
G E +D VLD +RK A+G
Sbjct: 481 VGKEQIDIVLDRLRKLADG 499
Score = 93.1 bits (221), Expect = 1e-19
Identities = 38/78 (48%), Positives = 55/78 (70%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 442
N +++E GK+VPRAV DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT
Sbjct: 854 NTFFSETGAGKHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 913
Query: 443 EGAELVDSVLDVVRKEAE 496
G E++D VLD +RK A+
Sbjct: 914 VGKEMIDLVLDRIRKLAD 931
Score = 36.7 bits (81), Expect = 0.011
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 126 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 248
RE + I GQ G QIG WE+ EHGI G D +
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 413
Score = 35.1 bits (77), Expect = 0.032
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 126 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 248
RE + + GQ G Q+G WE+ EHGI G D +
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTI 846
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 93.1 bits (221), Expect = 1e-19
Identities = 37/78 (47%), Positives = 56/78 (71%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 442
N +++E GK+VPRAV VDLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT
Sbjct: 468 NTFFSETGAGKHVPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYT 527
Query: 443 EGAELVDSVLDVVRKEAE 496
G + +D+VLD +RK A+
Sbjct: 528 VGKDHIDNVLDRIRKLAD 545
Score = 89.8 bits (213), Expect = 1e-18
Identities = 37/78 (47%), Positives = 55/78 (70%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 442
N +++E GK+VPRAV DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT
Sbjct: 35 NTFFSETGAGKHVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 94
Query: 443 EGAELVDSVLDVVRKEAE 496
G +L++ VLD +RK A+
Sbjct: 95 VGKQLIEIVLDRLRKLAD 112
Score = 35.9 bits (79), Expect = 0.019
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 126 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 248
RE V I GQ G Q+G WE+ EHGI G D +
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTI 460
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 92.7 bits (220), Expect = 2e-19
Identities = 39/78 (50%), Positives = 55/78 (70%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 442
N +++E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT
Sbjct: 50 NTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 109
Query: 443 EGAELVDSVLDVVRKEAE 496
G E++D VLD RK A+
Sbjct: 110 IGKEIIDLVLDRCRKLAD 127
Score = 37.5 bits (83), Expect = 0.006
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 248
MRE + I GQ G Q+G WE+ EHGI G D +
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTI 42
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 88.6 bits (210), Expect = 2e-18
Identities = 37/78 (47%), Positives = 53/78 (67%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 442
N ++ E GK+VPRAV VDLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT
Sbjct: 15 NTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARGHYT 74
Query: 443 EGAELVDSVLDVVRKEAE 496
G E +D LD +RK A+
Sbjct: 75 VGKEHIDLALDRIRKLAD 92
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 87.4 bits (207), Expect = 6e-18
Identities = 36/71 (50%), Positives = 53/71 (74%)
Frame = +2
Query: 275 NEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 454
+EA+ GKYVPRAV+VDLEP +D VR+G + ++ P+ + G+ A NN+A+GHYT G E
Sbjct: 965 SEAAAGKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKE 1024
Query: 455 LVDSVLDVVRK 487
+V+ V+D +RK
Sbjct: 1025 MVEVVMDKIRK 1035
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 65.3 bits (152), Expect = 3e-11
Identities = 33/78 (42%), Positives = 46/78 (58%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 442
N +++E GK+VPRAV VDLEP + P+ + G+ A NN+A+GHYT
Sbjct: 50 NTFFSETGAGKHVPRAVFVDLEPTVV----------ALSPEQLITGKEDAANNYARGHYT 99
Query: 443 EGAELVDSVLDVVRKEAE 496
G + VD VLD +RK A+
Sbjct: 100 IGKQQVDQVLDRLRKLAD 117
Score = 38.3 bits (85), Expect = 0.003
Identities = 18/39 (46%), Positives = 20/39 (51%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 239
MRE + I GQ G QIG WE+ EHGI G D
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSD 39
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 63.3 bits (147), Expect = 1e-10
Identities = 26/52 (50%), Positives = 37/52 (71%)
Frame = +2
Query: 341 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 496
D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK A+
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLAD 64
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 60.9 bits (141), Expect = 6e-10
Identities = 25/50 (50%), Positives = 36/50 (72%)
Frame = +2
Query: 347 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 496
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK A+
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLAD 52
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 59.7 bits (138), Expect = 1e-09
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = +2
Query: 347 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 487
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 55.2 bits (127), Expect = 3e-08
Identities = 22/50 (44%), Positives = 34/50 (68%)
Frame = +2
Query: 347 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 496
+R+G + Q+F P+ + G+ A NN+A+GHYT G E +D LD +RK A+
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLAD 52
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 52.8 bits (121), Expect = 2e-07
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +2
Query: 347 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 487
VR G + +F PD + G+ A NN+A+GHYT G E +D L+ +RK
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRK 49
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 51.2 bits (117), Expect = 5e-07
Identities = 22/32 (68%), Positives = 26/32 (81%)
Frame = +2
Query: 401 QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 496
Q+ A NNWAKG YTEGAEL+DS +D +RK AE
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAE 33
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 42.7 bits (96), Expect = 2e-04
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +2
Query: 305 RAVMVDLEPGTMDSVRS--GPFGQIFRPDNFVFGQS-GAGNNWAKGHYTEGAELVDSVLD 475
RAV +D+E + S G P F Q G+GNNWA G G + +D VLD
Sbjct: 67 RAVSIDMESKVISQTLSEASKSGTWRYPKGQQFSQKRGSGNNWAHGFSEHGPKSIDKVLD 126
Query: 476 VVRKEAE 496
+V++E E
Sbjct: 127 LVQREVE 133
Score = 31.9 bits (69), Expect = 0.30
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +3
Query: 132 IVHIQAGQCGNQIGAKFWEVISDE 203
IV +Q GQCGNQIG + +++I ++
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVED 26
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 41.1 bits (92), Expect = 5e-04
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +2
Query: 305 RAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNW 424
RAV++D+E G ++++ GP +F + SG GNNW
Sbjct: 76 RAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 39.9 bits (89), Expect = 0.001
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVR 352
N +++E GGK+VPRAV VDLEP + ++
Sbjct: 50 NTFFSETGGGKHVPRAVFVDLEPSVVGRMK 79
Score = 38.3 bits (85), Expect = 0.003
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 248
MRE + + GQ G QIG WE+ EHGI G D +
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 42
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 37.1 bits (82), Expect = 0.008
Identities = 18/39 (46%), Positives = 20/39 (51%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 239
MRE + I GQ G QIG WE+ EHGI G D
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDGHMPSD 234
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 30.7 bits (66), Expect = 0.70
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3
Query: 180 FWEVISDEHGIDATG 224
FWEVI++EHGID G
Sbjct: 1 FWEVIAEEHGIDPDG 15
>SB_55131| Best HMM Match : fn3 (HMM E-Value=0.0083)
Length = 1266
Score = 29.9 bits (64), Expect = 1.2
Identities = 22/53 (41%), Positives = 24/53 (45%)
Frame = -3
Query: 467 PNQPVQPPLCNVLSPSYSPPQTVRRRSCPVGRFAQTARNGRSPWFQAQGPPSQ 309
P+Q VQ PL L P Y PP V TA R P Q QGPP+Q
Sbjct: 1080 PHQAVQQPLPQQLPPQYRPPAIV------------TAAVARPP--QVQGPPTQ 1118
>SB_50693| Best HMM Match : C2 (HMM E-Value=0)
Length = 1049
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = -2
Query: 411 APDCPKTKLSGRKICPNGPERTESMVPGSRSTITAR----GTYLP 289
A DCP ++ +GR +CP P +S + ++++I GT+ P
Sbjct: 138 AVDCPTSRKNGRGLCPFPPPPLQSALKRAKASIEVNDFTLGTHTP 182
>SB_17458| Best HMM Match : Metalloenzyme (HMM E-Value=0.29)
Length = 190
Score = 28.7 bits (61), Expect = 2.8
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +3
Query: 201 EHGIDATGAYSGDSDLQLNASMSTITK 281
+HG+ TG + GDSD +L+A++ +K
Sbjct: 137 DHGMTRTGDHGGDSDDELDAALFVYSK 163
>SB_25442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1010
Score = 27.9 bits (59), Expect = 4.9
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = -2
Query: 402 CPKTKLSGRKICPNGPERTESMVPGSRSTITARGTYLPPEA 280
CP+ + RK P+G + + G+ S + ++G +PP A
Sbjct: 456 CPQGNMDYRKAAPDGRDMQQMGQKGNFSQMLSQGRGMPPGA 496
>SB_34911| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 904
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -3
Query: 455 VQPPLCNVLSPSYSPPQTVRRRSCPVGRFAQTARNGRS-PWFQAQGPPSQL 306
V PP+C+ L S P S A+ A++G + W + + P +QL
Sbjct: 193 VHPPICDCLGCRISSPVVASPESIREAFEAENAKDGNADDWGEVKTPTNQL 243
>SB_23752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 27.5 bits (58), Expect = 6.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 479 LHPVPNQPVQPPLCNVLSPSYSPP 408
L PVP+ P Q P +P+++PP
Sbjct: 476 LDPVPSAPTQAPTPTPAAPTHAPP 499
>SB_47472| Best HMM Match : zf-CXXC (HMM E-Value=5.9)
Length = 433
Score = 27.1 bits (57), Expect = 8.6
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -1
Query: 418 IPRPRLSEDEVVRSEDLPKRPGTDGVHGSRLKVH 317
+P P S+++ +SE + RPG D SR VH
Sbjct: 64 LPPPLYSQNDHQKSEHILLRPGVDLKTASRCTVH 97
>SB_46977| Best HMM Match : Cu_amine_oxid (HMM E-Value=3.9e-09)
Length = 549
Score = 27.1 bits (57), Expect = 8.6
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -1
Query: 451 SPLCVMSFRPVIPRPRLSEDEVVRSEDL 368
+P + +F+P P RLSE E+VR DL
Sbjct: 407 NPKSLKAFQPFWPAIRLSELELVRRSDL 434
>SB_34195| Best HMM Match : Init_tRNA_PT (HMM E-Value=2.7)
Length = 597
Score = 27.1 bits (57), Expect = 8.6
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -3
Query: 410 PQTVRRRSCPVGRFAQTARN 351
P +R SCPVGR AQ +R+
Sbjct: 404 PNKKKRESCPVGRGAQFSRS 423
>SB_26176| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 535
Score = 27.1 bits (57), Expect = 8.6
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = -3
Query: 464 NQPVQPPLCNVLSPSYSPPQTVRRRSCPVGRFAQTARNGRSPW 336
+ P+QP LC +SP + R+R+ +G + A R W
Sbjct: 479 SDPIQP-LCGPISPPQATTPQPRQRAHTIGAISDLAATRRHWW 520
>SB_4771| Best HMM Match : DEAD (HMM E-Value=0.015)
Length = 592
Score = 27.1 bits (57), Expect = 8.6
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = -3
Query: 473 PVPNQPVQP-PLCNVLSPSYSPPQTVRRRSCPVGRFAQTARNGRSPWFQAQGPPSQL 306
PV + P P P+ N + P PP + A G SP F +QGPP +L
Sbjct: 65 PVASTPPAPQPVPNNMGP---PPHVNQGPPPNSANQAPPPNPGPSPSFNSQGPPQRL 118
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,762,790
Number of Sequences: 59808
Number of extensions: 358774
Number of successful extensions: 1072
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 937
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1069
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1075029208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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