Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0380
         (598 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    24   1.3  
AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.          24   1.3  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   1.7  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   1.7  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   3.0  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   5.3  
AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc fi...    21   6.9  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   9.2  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   9.2  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   9.2  

>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -1

Query: 292 DCVVRGRREQIGIIPIFTNPRFFKRSAELGLVA 194
           DC+     E +G +P+  +P F + S E+GL +
Sbjct: 335 DCI----HELLGHMPLLADPSFAQFSQEIGLAS 363


>AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.
          Length = 148

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +2

Query: 8   GAIGPIGANSVSSGLSWEQHPVLSRASSVPAHRALAGLL 124
           G+ GP   N VS  +SWE H  ++ + +      + GL+
Sbjct: 38  GSYGPEAGN-VSCSVSWEVHDPVTNSDTYIGFLFVLGLI 75


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = -3

Query: 449  MRAMPNEPPGDDGSLRLASSALCTKWQRGP 360
            M  +P+ PP D     L S +L   WQ  P
Sbjct: 1107 MEDVPSIPPEDVRCAALTSQSLQVSWQPPP 1136



 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -3

Query: 437 PNEPPGDDGSLRLASSALCTKWQ 369
           P +PP    +  +AS ++  KWQ
Sbjct: 907 PPQPPNSLETAMVASRSINVKWQ 929


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = -3

Query: 449  MRAMPNEPPGDDGSLRLASSALCTKWQRGP 360
            M  +P+ PP D     L S +L   WQ  P
Sbjct: 1103 MEDVPSIPPEDVRCAALTSQSLQVSWQPPP 1132



 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -3

Query: 437 PNEPPGDDGSLRLASSALCTKWQ 369
           P +PP    +  +AS ++  KWQ
Sbjct: 903 PPQPPNSLETAMVASRSINVKWQ 925


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +2

Query: 467 SYMSDGSRSPRSPHLH*TPHSSTCDVATST 556
           +Y+  G  SPRSP+   +P        T T
Sbjct: 729 NYIMRGEASPRSPNASPSPAEQCASTTTIT 758


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 156 PPVNRLLRHQPQVATRPSSADRL 224
           PP   LLR+   +AT P    +L
Sbjct: 827 PPTPNLLRYFASIATNPKEQAQL 849


>AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc
           finger domain-Z3 isoform protein.
          Length = 92

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +1

Query: 166 TGSSATSHKSLQDR 207
           T +S T+HKSLQ R
Sbjct: 47  TKNSLTTHKSLQHR 60


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -3

Query: 452 PMRAMPNEPPGDDGSLRLAS 393
           P   +PN  PG+   LRL S
Sbjct: 335 PPSGIPNWVPGNHDQLRLVS 354


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = -1

Query: 190 CGWWRRSRFTGG 155
           CGW   SR  GG
Sbjct: 153 CGWKNPSRIVGG 164


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -3

Query: 452 PMRAMPNEPPGDDGSLRLAS 393
           P   +PN  PG+   LRL S
Sbjct: 335 PPSGIPNWVPGNHDQLRLVS 354


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,304
Number of Sequences: 438
Number of extensions: 3463
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)