Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0379
         (518 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7Q9Y8 Cluster: ENSANGP00000011734; n=4; Endopterygota|...    44   0.002
UniRef50_Q6UUN2 Cluster: Putative transposon protein; n=1; Oryza...    36   0.56 
UniRef50_P51838 Cluster: DNA repair protein recO; n=3; Coxiella ...    33   3.9  
UniRef50_Q4T890 Cluster: Chromosome undetermined SCAF7862, whole...    33   5.2  
UniRef50_Q96JG9 Cluster: Zinc finger protein 469; n=5; Eutheria|...    33   5.2  

>UniRef50_Q7Q9Y8 Cluster: ENSANGP00000011734; n=4;
           Endopterygota|Rep: ENSANGP00000011734 - Anopheles
           gambiae str. PEST
          Length = 490

 Score = 44.0 bits (99), Expect = 0.002
 Identities = 21/34 (61%), Positives = 27/34 (79%), Gaps = 2/34 (5%)
 Frame = +1

Query: 256 GDDE--IISGIADTKISKSXXETAALNVINSHRN 351
           GDDE  IISG+ DT+ISK   +TAALNVI +H++
Sbjct: 57  GDDEFCIISGVVDTRISKRASQTAALNVIKTHKS 90



 Score = 41.5 bits (93), Expect = 0.011
 Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 11/57 (19%)
 Frame = +2

Query: 116 GLLSDTFWRTPQRAVPGRPYQRVIPNEVMSG-----------SSYQQFQASVNDAWD 253
           G  S +FWR   R +PGRP    + N + SG           SS+Q +Q SV+DAWD
Sbjct: 1   GTTSSSFWRNNSRTIPGRP--TTVTNRIGSGRTIGAGSSGGSSSFQDYQDSVSDAWD 55


>UniRef50_Q6UUN2 Cluster: Putative transposon protein; n=1; Oryza
           sativa (japonica cultivar-group)|Rep: Putative
           transposon protein - Oryza sativa subsp. japonica (Rice)
          Length = 379

 Score = 35.9 bits (79), Expect = 0.56
 Identities = 17/58 (29%), Positives = 30/58 (51%)
 Frame = +3

Query: 81  LLWKITNPNMTRVCCLTRSGGHLSALYRGGLTKGSSQTRLCPGRRISNSRRQSTTPGI 254
           LL+    P  +R+CCL R+   ++  + G  T  SS     P ++++ S   ST+ G+
Sbjct: 114 LLFPRCRPPSSRLCCLARAAADVAIAFPGTATPSSSPASPYPRQKLAGSVSSSTSGGV 171


>UniRef50_P51838 Cluster: DNA repair protein recO; n=3; Coxiella
           burnetii|Rep: DNA repair protein recO - Coxiella
           burnetii
          Length = 231

 Score = 33.1 bits (72), Expect = 3.9
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +3

Query: 69  SNCTLLWKITNPNMTRVCCLTRSGGHLSALYRGGL 173
           SN +L+ ++  PN  RVC L RS   L + Y+G L
Sbjct: 19  SNTSLILELLTPNHGRVCALARSARGLKSRYKGKL 53


>UniRef50_Q4T890 Cluster: Chromosome undetermined SCAF7862, whole
           genome shotgun sequence; n=3; Euteleostomi|Rep:
           Chromosome undetermined SCAF7862, whole genome shotgun
           sequence - Tetraodon nigroviridis (Green puffer)
          Length = 521

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
 Frame = +2

Query: 134 FWRTPQRAVPGRPYQ---RVIPNEVMSGSSYQQFQASVNDAWD 253
           FWR   + VPGR ++   +V   +    SS+ +F  S NDAWD
Sbjct: 9   FWRRSAK-VPGRSHKDTSKVNSLKAKKASSFHEFAHSTNDAWD 50


>UniRef50_Q96JG9 Cluster: Zinc finger protein 469; n=5;
           Eutheria|Rep: Zinc finger protein 469 - Homo sapiens
           (Human)
          Length = 3925

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = +2

Query: 143 TPQRAVPGRPYQRVIPNEVMSGSSYQQFQASVNDAWDPATTRSSRG 280
           TP+   PG P  R      +   SY ++QAS  D+W PA   S  G
Sbjct: 202 TPRPPAPGPPQSR--GTSPLQPGSYPEYQASGADSWPPAAENSFPG 245


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 447,325,644
Number of Sequences: 1657284
Number of extensions: 8172717
Number of successful extensions: 22806
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 22235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22799
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32201017387
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)