Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0377
         (398 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           26   0.44 
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    25   0.77 
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    24   2.4  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    23   3.1  
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          23   4.1  
Y17702-1|CAA76822.2|  260|Anopheles gambiae putative gVAG protei...    22   9.5  
AY645021-1|AAT92557.1|  163|Anopheles gambiae even-skipped protein.    22   9.5  
AF457548-1|AAL68778.1|  178|Anopheles gambiae antigen 5-related ...    22   9.5  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    22   9.5  

>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 26.2 bits (55), Expect = 0.44
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 321  RWXERVMFSITSWRGGYHG 265
            RW  R++  I++W+G  HG
Sbjct: 959  RWTHRIIRDISAWQGRRHG 977


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 25.4 bits (53), Expect = 0.77
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 321 RWXERVMFSITSWRGGYHGSSS 256
           RW  RV+ +I SW+   HG  S
Sbjct: 892 RWAHRVLPNIGSWQSRKHGDVS 913


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1201

 Score = 23.8 bits (49), Expect = 2.4
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -3

Query: 345  NRKGPILERWXERVMFSITSWRGGYHG 265
            N +     RW  RV+  + SW+   HG
Sbjct: 959  NERASRYVRWAHRVIPDVGSWQSRKHG 985


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
            gambiae RT2 retroposon. ).
          Length = 1222

 Score = 23.4 bits (48), Expect = 3.1
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 321  RWXERVMFSITSWRGGYHG 265
            RW  RV+ S+  W+   HG
Sbjct: 955  RWTHRVIPSVGDWQSRKHG 973


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 23.0 bits (47), Expect = 4.1
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = +1

Query: 34  IARREQKLKEHGASSCISGXRGRRCCNIWHWGSVDS 141
           I+R    + E+G +    G     CC +W W  ++S
Sbjct: 65  ISRNASAIGENGVA-LKKGLPHVICCRLWRWPDLNS 99


>Y17702-1|CAA76822.2|  260|Anopheles gambiae putative gVAG protein
           precursor protein.
          Length = 260

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +3

Query: 246 CHSDCCCHGSPH 281
           C SD C  G PH
Sbjct: 25  CSSDLCPRGGPH 36


>AY645021-1|AAT92557.1|  163|Anopheles gambiae even-skipped protein.
          Length = 163

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = -1

Query: 218 SMLVQQRLCFLPLFPLS*NRAREPLMESTDPQCHILQHR 102
           SMLV   +   P  PLS ++++ P  ++     H L H+
Sbjct: 38  SMLVTGSMPPSPYAPLSMSKSQTPPQDTVGTAQHQLHHQ 76


>AF457548-1|AAL68778.1|  178|Anopheles gambiae antigen 5-related 1
           protein protein.
          Length = 178

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +3

Query: 246 CHSDCCCHGSPH 281
           C SD C  G PH
Sbjct: 25  CSSDLCPRGGPH 36


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -3

Query: 321 RWXERVMFSITSWRGGYHG 265
           RW  RV+  I +W    HG
Sbjct: 916 RWTHRVIPDIAAWHFRRHG 934


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 365,837
Number of Sequences: 2352
Number of extensions: 6222
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 31639662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)