Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0376
         (598 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75711-7|CAB00031.2|  380|Caenorhabditis elegans Hypothetical pr...    30   1.1  
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote...    30   1.1  
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote...    30   1.1  
AF286377-1|AAG10298.1|  380|Caenorhabditis elegans POU family II...    30   1.1  
U53148-7|AAB37074.4|  529|Caenorhabditis elegans Cytochrome p450...    29   2.5  
Z70752-5|CAA94758.1|  901|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z70750-16|CAA94750.1|  901|Caenorhabditis elegans Hypothetical p...    29   3.3  
AF067215-5|AAC17010.3|  441|Caenorhabditis elegans T box family ...    29   3.3  
AF026203-1|AAB71246.2|  506|Caenorhabditis elegans Hypothetical ...    29   3.3  
U41025-2|AAM51507.2|  356|Caenorhabditis elegans Hypothetical pr...    28   4.4  
Z74043-12|CAA98548.1|  503|Caenorhabditis elegans Hypothetical p...    27   7.7  
Z74040-7|CAA98515.1|  503|Caenorhabditis elegans Hypothetical pr...    27   7.7  
AC006677-3|AAF39952.2|  298|Caenorhabditis elegans Serpentine re...    27   7.7  

>Z75711-7|CAB00031.2|  380|Caenorhabditis elegans Hypothetical
           protein K02B12.1 protein.
          Length = 380

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = +2

Query: 299 IVTSTMDYRLKNNVERPDMIQLLM 370
           +VTST   ++K  VERP++IQ LM
Sbjct: 130 VVTSTPSCQIKQEVERPEIIQRLM 153


>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
             protein.
          Length = 18519

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 17/61 (27%), Positives = 30/61 (49%)
 Frame = +2

Query: 329   KNNVERPDMIQLLMDAYKGTLKNESNESDEKNVGFAMTEEMLKPKGNVRKWTQDELTAQV 508
             +NN+ +    +       GT  N++ ES + N  F  TE+  + +  VRK T+  LT  +
Sbjct: 10598 ENNLGKSGKDEFATSGESGT-SNQNEESAQLNTSFTSTEQHGQTEKQVRKGTRKSLTRSL 10656

Query: 509   S 511
             +
Sbjct: 10657 N 10657


>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
             protein.
          Length = 18534

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 17/61 (27%), Positives = 30/61 (49%)
 Frame = +2

Query: 329   KNNVERPDMIQLLMDAYKGTLKNESNESDEKNVGFAMTEEMLKPKGNVRKWTQDELTAQV 508
             +NN+ +    +       GT  N++ ES + N  F  TE+  + +  VRK T+  LT  +
Sbjct: 10598 ENNLGKSGKDEFATSGESGT-SNQNEESAQLNTSFTSTEQHGQTEKQVRKGTRKSLTRSL 10656

Query: 509   S 511
             +
Sbjct: 10657 N 10657


>AF286377-1|AAG10298.1|  380|Caenorhabditis elegans POU family III
           homeodomain proteinCEH-6 protein.
          Length = 380

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = +2

Query: 299 IVTSTMDYRLKNNVERPDMIQLLM 370
           +VTST   ++K  VERP++IQ LM
Sbjct: 130 VVTSTPSCQIKQEVERPEIIQRLM 153


>U53148-7|AAB37074.4|  529|Caenorhabditis elegans Cytochrome p450
           family protein 32A1 protein.
          Length = 529

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 12/45 (26%), Positives = 21/45 (46%)
 Frame = +3

Query: 63  DVDDLMRRYTXDVIASAGFGLQVNSLVDKDNEFYECGQAMFSTSW 197
           D     +R T D+I     G+QVN+ +  +NE+    + +    W
Sbjct: 191 DAFPYFKRCTLDIICETAMGIQVNAQLGHNNEYVHAVKRISEIVW 235


>Z70752-5|CAA94758.1|  901|Caenorhabditis elegans Hypothetical
           protein F25B3.1 protein.
          Length = 901

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 106 PQPVSDSRLIRWSTRITNSTSVVK 177
           PQP+    L+ W  R+TN  S VK
Sbjct: 329 PQPIDGETLLSWCQRVTNGYSHVK 352


>Z70750-16|CAA94750.1|  901|Caenorhabditis elegans Hypothetical
           protein F25B3.1 protein.
          Length = 901

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 106 PQPVSDSRLIRWSTRITNSTSVVK 177
           PQP+    L+ W  R+TN  S VK
Sbjct: 329 PQPIDGETLLSWCQRVTNGYSHVK 352


>AF067215-5|AAC17010.3|  441|Caenorhabditis elegans T box family
           protein 32 protein.
          Length = 441

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = +2

Query: 404 NESDEKNVGFAMTEEMLKPKGNVRKWTQDELTAQVSSSSLRDLKAPA 544
           NE D++   F  TE  L+   N   W Q+ +   + S+ L +  APA
Sbjct: 379 NELDQQ---FTPTENQLQDLSNCTTWNQEPINNSIQSNQLNNNIAPA 422


>AF026203-1|AAB71246.2|  506|Caenorhabditis elegans Hypothetical
           protein E03E2.1 protein.
          Length = 506

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +2

Query: 488 DELTAQVSSSSLRDLKAPANGLTLCIHELALNPEAQE 598
           +E+TAQ    S+      +N LTL  + LA NP+ Q+
Sbjct: 299 EEITAQCKFISVAGFDTTSNTLTLLFNFLANNPDVQD 335


>U41025-2|AAM51507.2|  356|Caenorhabditis elegans Hypothetical
           protein C01C4.3a protein.
          Length = 356

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 23/101 (22%), Positives = 44/101 (43%), Gaps = 7/101 (6%)
 Frame = +2

Query: 236 NVSQENRIKVFPQKVTRFFREIVTST------MDYRLKNNVERPDM-IQLLMDAYKGTLK 394
           N   E  +K+F + +T  F++  T+          +L  +V+RP+    +++D    + +
Sbjct: 247 NPFSEKALKLFKKSLTPRFKDRWTAKDMRKCLAKEKLLKSVKRPEEDYYVMIDTASKSRQ 306

Query: 395 NESNESDEKNVGFAMTEEMLKPKGNVRKWTQDELTAQVSSS 517
             ++ S E     A   E  K K  +++W    LTA    S
Sbjct: 307 TATSSSGEPQDPSAPAAEQRKQKSTLQQWISTTLTAMAEIS 347


>Z74043-12|CAA98548.1|  503|Caenorhabditis elegans Hypothetical
           protein T19B10.1 protein.
          Length = 503

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 8/38 (21%), Positives = 24/38 (63%)
 Frame = +3

Query: 54  EDVDVDDLMRRYTXDVIASAGFGLQVNSLVDKDNEFYE 167
           E VD+   ++R   D+I+    G+++++ ++ D+++ +
Sbjct: 174 ETVDIFPYVKRCALDIISETAMGIKIDAQINHDHKYVQ 211


>Z74040-7|CAA98515.1|  503|Caenorhabditis elegans Hypothetical
           protein T19B10.1 protein.
          Length = 503

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 8/38 (21%), Positives = 24/38 (63%)
 Frame = +3

Query: 54  EDVDVDDLMRRYTXDVIASAGFGLQVNSLVDKDNEFYE 167
           E VD+   ++R   D+I+    G+++++ ++ D+++ +
Sbjct: 174 ETVDIFPYVKRCALDIISETAMGIKIDAQINHDHKYVQ 211


>AC006677-3|AAF39952.2|  298|Caenorhabditis elegans Serpentine
           receptor, class x protein28 protein.
          Length = 298

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 10/23 (43%), Positives = 18/23 (78%)
 Frame = -1

Query: 472 YIPLWF*HLFCHSKTYIFFV*FV 404
           ++PLW+ H+F +SKT +F+  F+
Sbjct: 106 FMPLWYTHIFSNSKT-VFYRNFI 127


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,204,633
Number of Sequences: 27780
Number of extensions: 235898
Number of successful extensions: 777
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 777
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)