Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0376
         (598 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    46   3e-07
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    24   0.98 
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    24   0.98 
AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding prote...    23   1.7  
AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-bind...    23   1.7  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   9.2  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 46.0 bits (104), Expect = 3e-07
 Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
 Frame = +3

Query: 3   MIDISKNIVEYLKG--HQLEDVDVDDLMRRYTXDVIASAGFGLQVNSLVDKDNEFYECGQ 176
           +I+ S N+  YL     + E ++  +L  R+T DVI S  FG+ ++S+ ++++EF   G+
Sbjct: 151 IIECSLNLETYLDKLIEKNEPIECRELTARFTTDVIGSCAFGIDMSSMTNENSEFRRMGR 210

Query: 177 AMFSTSWPQRFKMILAAQFPTL 242
            +F+ ++    +M L    P L
Sbjct: 211 EVFAVNFMNVMRMKLKQFMPRL 232



 Score = 41.1 bits (92), Expect = 8e-06
 Identities = 18/39 (46%), Positives = 24/39 (61%)
 Frame = +2

Query: 287 FFREIVTSTMDYRLKNNVERPDMIQLLMDAYKGTLKNES 403
           FF  +VT T+ YR  NN+ RPD I +LM+  K   K E+
Sbjct: 248 FFTRVVTDTIKYRNDNNIVRPDFINMLMELQKNPQKLEN 286



 Score = 25.0 bits (52), Expect = 0.56
 Identities = 9/12 (75%), Positives = 12/12 (100%)
 Frame = +1

Query: 505 SFIFFLAGFESS 540
           +F+FFLAGFE+S
Sbjct: 298 AFVFFLAGFETS 309


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +2

Query: 386 TLKNESNESDEKNVGFAMTEEMLKPKGNVRKWTQDELTAQVSSSSLRDLKAPAN 547
           T  +E+ E+ +K+    M  + L     VR+   DE+T  + S+++  L  PAN
Sbjct: 16  TFDSETWEAIKKDAAVNMEGQFL-----VRQIYDDEITYNIISAAVNRLNIPAN 64


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +2

Query: 386 TLKNESNESDEKNVGFAMTEEMLKPKGNVRKWTQDELTAQVSSSSLRDLKAPAN 547
           T  +E+ E+ +K+    M  + L     VR+   DE+T  + S+++  L  PAN
Sbjct: 16  TFDSETWEAIKKDAAVNMEGQFL-----VRQIYDDEITYNIISAAVNRLNIPAN 64


>AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding protein
           ASP2 protein.
          Length = 142

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +2

Query: 350 DMIQLLMDAYKGTLKNESNESDEKNVGFAMTE 445
           D IQL+       ++N   E+DE N+G   T+
Sbjct: 103 DDIQLVKGIANECIENAKGETDECNIGNKYTD 134


>AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-binding
           protein ASP2 protein.
          Length = 142

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +2

Query: 350 DMIQLLMDAYKGTLKNESNESDEKNVGFAMTE 445
           D IQL+       ++N   E+DE N+G   T+
Sbjct: 103 DDIQLVKGIANECIENAKGETDECNIGNKYTD 134


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 12/39 (30%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
 Frame = +2

Query: 266 FPQKVTRFFREIVTSTMDYRLKNNVERPDM--IQLLMDA 376
           F    TRF+   V    DY    N+   D+    LL+D+
Sbjct: 463 FDDGTTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLDS 501


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,233
Number of Sequences: 438
Number of extensions: 2601
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)