Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0372
(598 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 183 1e-46
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 178 2e-45
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 178 3e-45
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 178 3e-45
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 170 7e-43
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 170 7e-43
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 112 2e-25
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 112 2e-25
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 100 7e-22
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 95 3e-20
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 93 1e-19
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 93 2e-19
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 93 2e-19
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 93 2e-19
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 93 2e-19
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 91 4e-19
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 91 4e-19
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 91 4e-19
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 91 4e-19
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 91 7e-19
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 91 7e-19
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 87 7e-18
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 87 7e-18
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 87 9e-18
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 68 6e-12
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 68 6e-12
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 29 2.5
AF003137-9|AAB93646.3| 883|Caenorhabditis elegans Hypothetical ... 29 3.3
Z73098-2|CAA97331.2| 1058|Caenorhabditis elegans Hypothetical pr... 28 4.4
AL022271-1|CAA18349.1| 919|Caenorhabditis elegans Hypothetical ... 28 4.4
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 183 bits (445), Expect = 1e-46
Identities = 81/88 (92%), Positives = 86/88 (97%)
Frame = +2
Query: 257 RINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 436
RINVYYNEA+GGKYVPRAV+VDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGH
Sbjct: 46 RINVYYNEANGGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGH 105
Query: 437 YTEGAELVDSVLDVVRKEAEGCDCCRVF 520
YTEGAELVD+VLDVVRKEAEGCDC + F
Sbjct: 106 YTEGAELVDNVLDVVRKEAEGCDCLQGF 133
Score = 86.2 bits (204), Expect = 2e-17
Identities = 37/44 (84%), Positives = 39/44 (88%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL 254
MREIVH+QAGQCGNQIGAKFWEVISDEHGI G Y G+SDLQL
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQL 44
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 178 bits (434), Expect = 2e-45
Identities = 79/88 (89%), Positives = 84/88 (95%)
Frame = +2
Query: 257 RINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 436
RINVYYNEASGGKYVPRA +VDLEPGTMDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGH
Sbjct: 46 RINVYYNEASGGKYVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGH 105
Query: 437 YTEGAELVDSVLDVVRKEAEGCDCCRVF 520
YTEGAELVD+VLDVVRKEAE CDC + F
Sbjct: 106 YTEGAELVDNVLDVVRKEAESCDCLQGF 133
Score = 95.1 bits (226), Expect = 3e-20
Identities = 42/44 (95%), Positives = 43/44 (97%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL 254
MREIVHIQAGQCGNQIGAKFWEVISDEHGID TGAY+GDSDLQL
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQL 44
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 178 bits (433), Expect = 3e-45
Identities = 78/88 (88%), Positives = 85/88 (96%)
Frame = +2
Query: 257 RINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 436
RI+VYYNEA+ GKYVPRAV+VDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGH
Sbjct: 46 RIDVYYNEANNGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGH 105
Query: 437 YTEGAELVDSVLDVVRKEAEGCDCCRVF 520
YTEGAELVD+VLDV+RKEAEGCDC + F
Sbjct: 106 YTEGAELVDNVLDVIRKEAEGCDCLQGF 133
Score = 83.4 bits (197), Expect = 1e-16
Identities = 35/44 (79%), Positives = 39/44 (88%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL 254
MREIVH+QAGQCGNQIG+KFWEVISDEHGI G + G+SDLQL
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQL 44
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 178 bits (433), Expect = 3e-45
Identities = 78/88 (88%), Positives = 85/88 (96%)
Frame = +2
Query: 257 RINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 436
RI+VYYNEA+ GKYVPRAV+VDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGH
Sbjct: 46 RIDVYYNEANNGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGH 105
Query: 437 YTEGAELVDSVLDVVRKEAEGCDCCRVF 520
YTEGAELVD+VLDV+RKEAEGCDC + F
Sbjct: 106 YTEGAELVDNVLDVIRKEAEGCDCLQGF 133
Score = 82.2 bits (194), Expect = 3e-16
Identities = 34/44 (77%), Positives = 39/44 (88%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL 254
MREIVH+QAGQCGNQIG+KFWEVISDEHGI G + G++DLQL
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQL 44
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 170 bits (413), Expect = 7e-43
Identities = 76/88 (86%), Positives = 81/88 (92%)
Frame = +2
Query: 257 RINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 436
RINVYYNEA KYVPRAV+VDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGH
Sbjct: 46 RINVYYNEAGSNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGH 105
Query: 437 YTEGAELVDSVLDVVRKEAEGCDCCRVF 520
YTEGAELVD+VLDVVRKEAE DC + F
Sbjct: 106 YTEGAELVDNVLDVVRKEAESTDCLQGF 133
Score = 89.0 bits (211), Expect = 2e-18
Identities = 39/44 (88%), Positives = 41/44 (93%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL 254
MREIVHIQAGQCGNQIG+KFWEVISDEHGID +G Y GDSDLQL
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL 44
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 170 bits (413), Expect = 7e-43
Identities = 76/88 (86%), Positives = 81/88 (92%)
Frame = +2
Query: 257 RINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 436
RINVYYNEA KYVPRAV+VDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGH
Sbjct: 46 RINVYYNEAGSNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGH 105
Query: 437 YTEGAELVDSVLDVVRKEAEGCDCCRVF 520
YTEGAELVD+VLDVVRKEAE DC + F
Sbjct: 106 YTEGAELVDNVLDVVRKEAESTDCLQGF 133
Score = 89.0 bits (211), Expect = 2e-18
Identities = 39/44 (88%), Positives = 41/44 (93%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL 254
MREIVHIQAGQCGNQIG+KFWEVISDEHGID +G Y GDSDLQL
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL 44
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 112 bits (269), Expect = 2e-25
Identities = 48/88 (54%), Positives = 66/88 (75%)
Frame = +2
Query: 257 RINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 436
RI YY E G KYVPRA++VDL+P +++ VRS +G++F P+N V G+SGAGNNW++G+
Sbjct: 46 RITSYYKEMEGRKYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGY 105
Query: 437 YTEGAELVDSVLDVVRKEAEGCDCCRVF 520
Y +GAE+VD VL V+R+EAE D F
Sbjct: 106 YEQGAEIVDKVLSVIRREAEAADSLEGF 133
Score = 74.1 bits (174), Expect = 7e-14
Identities = 30/56 (53%), Positives = 40/56 (71%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLNASMSTITKLQG 290
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QL S +++G
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEG 56
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 112 bits (269), Expect = 2e-25
Identities = 48/88 (54%), Positives = 66/88 (75%)
Frame = +2
Query: 257 RINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 436
RI YY E G KYVPRA++VDL+P +++ VRS +G++F P+N V G+SGAGNNW++G+
Sbjct: 46 RITSYYKEMEGRKYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGY 105
Query: 437 YTEGAELVDSVLDVVRKEAEGCDCCRVF 520
Y +GAE+VD VL V+R+EAE D F
Sbjct: 106 YEQGAEIVDKVLSVIRREAEAADSLEGF 133
Score = 74.1 bits (174), Expect = 7e-14
Identities = 30/56 (53%), Positives = 40/56 (71%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLNASMSTITKLQG 290
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QL S +++G
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEG 56
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 100 bits (240), Expect = 7e-22
Identities = 39/82 (47%), Positives = 59/82 (71%)
Frame = +2
Query: 260 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY 439
+ +++E+ GK+VPRA+ VDLEP +D +R+G +G +F PD + G+ A NN+A+GHY
Sbjct: 52 LQAFFSESMNGKHVPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHY 111
Query: 440 TEGAELVDSVLDVVRKEAEGCD 505
T G EL+D VLD +RK+ E C+
Sbjct: 112 TIGKELIDVVLDRIRKQTENCE 133
Score = 37.9 bits (84), Expect = 0.005
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = +3
Query: 126 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATG 224
RE V I GQ G QIG WE+ EHG+D G
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAG 38
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 95.1 bits (226), Expect = 3e-20
Identities = 39/86 (45%), Positives = 58/86 (67%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 442
N +++E GK+VPRA+ VDLEP +D VR+G + ++F P+ + G+ A NN+A+GHYT
Sbjct: 50 NTFFSETPSGKHVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYT 109
Query: 443 EGAELVDSVLDVVRKEAEGCDCCRVF 520
G EL+D V+D VR+ E C + F
Sbjct: 110 IGKELIDVVMDRVRRLTERCQSLQGF 135
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/40 (50%), Positives = 22/40 (55%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDS 242
MREIV I GQ G QIG WE+ EHGI G D+
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDT 40
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 93.1 bits (221), Expect = 1e-19
Identities = 37/80 (46%), Positives = 56/80 (70%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 442
N +++E GK+VPRA+MVDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT
Sbjct: 55 NTFFSETMAGKHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYT 114
Query: 443 EGAELVDSVLDVVRKEAEGC 502
G E++D V+D VR+ E C
Sbjct: 115 IGKEIIDVVMDRVRRLVENC 134
Score = 36.7 bits (81), Expect = 0.013
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +3
Query: 126 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 248
RE++ I GQ G Q+G WE+ EHGI G + + L
Sbjct: 7 REVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSL 47
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 92.7 bits (220), Expect = 2e-19
Identities = 34/78 (43%), Positives = 57/78 (73%)
Frame = +2
Query: 269 YYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEG 448
++++ G+YVPR++ VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G
Sbjct: 50 FFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVG 109
Query: 449 AELVDSVLDVVRKEAEGC 502
EL+D+VLD +R+ A+ C
Sbjct: 110 KELIDTVLDRIRRLADNC 127
Score = 38.7 bits (86), Expect = 0.003
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATG 224
MRE++ I GQ G QIG WE+ EHGI G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDG 34
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 92.7 bits (220), Expect = 2e-19
Identities = 34/78 (43%), Positives = 57/78 (73%)
Frame = +2
Query: 269 YYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEG 448
++++ G+YVPR++ VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G
Sbjct: 50 FFSDTGNGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVG 109
Query: 449 AELVDSVLDVVRKEAEGC 502
EL+D+VLD +R+ A+ C
Sbjct: 110 KELIDTVLDRIRRLADNC 127
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 239
MRE++ I GQ G QIG WE+ EHGI G D
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSD 39
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 92.7 bits (220), Expect = 2e-19
Identities = 34/78 (43%), Positives = 57/78 (73%)
Frame = +2
Query: 269 YYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEG 448
++++ G+YVPR++ VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G
Sbjct: 50 FFSDTGNGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVG 109
Query: 449 AELVDSVLDVVRKEAEGC 502
EL+D+VLD +R+ A+ C
Sbjct: 110 KELIDTVLDRIRRLADNC 127
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 239
MRE++ I GQ G QIG WE+ EHGI G D
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSD 39
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 92.7 bits (220), Expect = 2e-19
Identities = 34/78 (43%), Positives = 57/78 (73%)
Frame = +2
Query: 269 YYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEG 448
++++ G+YVPR++ VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G
Sbjct: 50 FFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVG 109
Query: 449 AELVDSVLDVVRKEAEGC 502
EL+D+VLD +R+ A+ C
Sbjct: 110 KELIDTVLDRIRRLADNC 127
Score = 38.7 bits (86), Expect = 0.003
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATG 224
MRE++ I GQ G QIG WE+ EHGI G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDG 34
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 91.5 bits (217), Expect = 4e-19
Identities = 35/80 (43%), Positives = 56/80 (70%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 442
+ +++E G++VPRAVMVDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT
Sbjct: 50 STFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYT 109
Query: 443 EGAELVDSVLDVVRKEAEGC 502
G E++D LD +R+ A+ C
Sbjct: 110 IGKEIIDLTLDRIRRLADNC 129
Score = 41.1 bits (92), Expect = 6e-04
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 248
MRE++ I GQ G QIG WE+ EHGI G D L
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSL 42
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 91.5 bits (217), Expect = 4e-19
Identities = 35/80 (43%), Positives = 56/80 (70%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 442
+ +++E G++VPRAVMVDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT
Sbjct: 49 STFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYT 108
Query: 443 EGAELVDSVLDVVRKEAEGC 502
G E++D LD +R+ A+ C
Sbjct: 109 IGKEIIDLTLDRIRRLADNC 128
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = +3
Query: 126 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 248
RE++ I GQ G QIG WE+ EHGI G D L
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSL 41
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 91.5 bits (217), Expect = 4e-19
Identities = 35/80 (43%), Positives = 56/80 (70%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 442
+ +++E G++VPRAVMVDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT
Sbjct: 50 STFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYT 109
Query: 443 EGAELVDSVLDVVRKEAEGC 502
G E++D LD +R+ A+ C
Sbjct: 110 IGKEIIDLTLDRIRRLADNC 129
Score = 41.1 bits (92), Expect = 6e-04
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 248
MRE++ I GQ G QIG WE+ EHGI G D L
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSL 42
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 91.5 bits (217), Expect = 4e-19
Identities = 35/80 (43%), Positives = 56/80 (70%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 442
+ +++E G++VPRAVMVDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT
Sbjct: 50 STFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYT 109
Query: 443 EGAELVDSVLDVVRKEAEGC 502
G E++D LD +R+ A+ C
Sbjct: 110 IGKEIIDLTLDRIRRLADNC 129
Score = 41.1 bits (92), Expect = 6e-04
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 248
MRE++ I GQ G QIG WE+ EHGI G D L
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSL 42
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 90.6 bits (215), Expect = 7e-19
Identities = 33/78 (42%), Positives = 56/78 (71%)
Frame = +2
Query: 269 YYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEG 448
++++ G+YVPR++ VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G
Sbjct: 50 FFSDTGNGRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVG 109
Query: 449 AELVDSVLDVVRKEAEGC 502
EL+D+ LD +R+ A+ C
Sbjct: 110 KELIDTTLDRIRRLADNC 127
Score = 38.7 bits (86), Expect = 0.003
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATG 224
MRE++ I GQ G QIG WE+ EHGI G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDG 34
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 90.6 bits (215), Expect = 7e-19
Identities = 33/78 (42%), Positives = 56/78 (71%)
Frame = +2
Query: 269 YYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEG 448
++++ G+YVPR++ VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G
Sbjct: 50 FFSDTGNGRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVG 109
Query: 449 AELVDSVLDVVRKEAEGC 502
EL+D+ LD +R+ A+ C
Sbjct: 110 KELIDTTLDRIRRLADNC 127
Score = 38.7 bits (86), Expect = 0.003
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATG 224
MRE++ I GQ G QIG WE+ EHGI G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDG 34
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 87.4 bits (207), Expect = 7e-18
Identities = 36/82 (43%), Positives = 56/82 (68%)
Frame = +2
Query: 260 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY 439
IN ++ E +GGK+VPR + VDLEP +D VR+G + +F P+ + G+ A N +A+G Y
Sbjct: 55 INTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRY 114
Query: 440 TEGAELVDSVLDVVRKEAEGCD 505
T G E++D V+D V++ AE C+
Sbjct: 115 TIGREMIDVVMDRVKRLAENCN 136
Score = 37.9 bits (84), Expect = 0.005
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = +3
Query: 126 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 239
RE++ I GQ G QIG WE+ EHGI G + D
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVED 45
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 87.4 bits (207), Expect = 7e-18
Identities = 36/82 (43%), Positives = 56/82 (68%)
Frame = +2
Query: 260 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY 439
IN ++ E +GGK+VPR + VDLEP +D VR+G + +F P+ + G+ A N +A+G Y
Sbjct: 27 INTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRY 86
Query: 440 TEGAELVDSVLDVVRKEAEGCD 505
T G E++D V+D V++ AE C+
Sbjct: 87 TIGREMIDVVMDRVKRLAENCN 108
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 87.0 bits (206), Expect = 9e-18
Identities = 31/82 (37%), Positives = 57/82 (69%)
Frame = +2
Query: 260 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY 439
+ ++++ G++VPR++ VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHY
Sbjct: 46 LGTFFSDTGYGRHVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHY 105
Query: 440 TEGAELVDSVLDVVRKEAEGCD 505
T G E++D+ LD +R+ A C+
Sbjct: 106 TVGKEIIDTTLDRIRRLANNCE 127
Score = 37.1 bits (82), Expect = 0.009
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGI 212
MRE++ I GQ G QIG WE+ EHGI
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGI 30
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 67.7 bits (158), Expect = 6e-12
Identities = 32/81 (39%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKG 433
++ + +A YVPRAV+VDLEP ++ + P F +F DN GAGNNWA G
Sbjct: 50 DLLFYQADDDHYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG 109
Query: 434 HYTEGAELVDSVLDVVRKEAE 496
Y +G E+ + ++D++ +EAE
Sbjct: 110 -YCQGQEVQEKIMDIIIREAE 129
Score = 42.7 bits (96), Expect = 2e-04
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 132 IVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 248
++ + GQCGNQ+ FW+ + DEHGI+ G + + D+
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM 45
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 67.7 bits (158), Expect = 6e-12
Identities = 32/81 (39%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKG 433
++ + +A YVPRAV+VDLEP ++ + P F +F DN GAGNNWA G
Sbjct: 50 DLLFYQADDDHYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG 109
Query: 434 HYTEGAELVDSVLDVVRKEAE 496
Y +G E+ + ++D++ +EAE
Sbjct: 110 -YCQGQEVQEKIMDIIIREAE 129
Score = 42.7 bits (96), Expect = 2e-04
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 132 IVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 248
++ + GQCGNQ+ FW+ + DEHGI+ G + + D+
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM 45
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 29.1 bits (62), Expect = 2.5
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = -3
Query: 467 PNQPVQPPLCNVLSPSYSPPQTVRRRSCPVGRFAQTARNGRSP 339
P+Q P SPS SP Q RRR P G +++ R RSP
Sbjct: 443 PSQSKSPAPRRRRSPSKSP-QAPRRRRSPSGSKSRSPRRRRSP 484
>AF003137-9|AAB93646.3| 883|Caenorhabditis elegans Hypothetical
protein C27A12.9 protein.
Length = 883
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +3
Query: 168 IGAKFWEVISDEHGIDATGAYSGDSDLQLNASMSTITK 281
IG + SD+HG+ +TG + G+S+ ++ A + +K
Sbjct: 245 IGQTIETMKSDDHGMTSTGDHGGESENEIRAGILVHSK 282
>Z73098-2|CAA97331.2| 1058|Caenorhabditis elegans Hypothetical
protein T21C9.2 protein.
Length = 1058
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 425 AKGHYTEGAELVDSVLDVVRKEAEGCDCCR 514
++G Y + E +++ LDV+ KE G C R
Sbjct: 407 SQGDYPKAIECIETSLDVLSKELNGVTCFR 436
>AL022271-1|CAA18349.1| 919|Caenorhabditis elegans Hypothetical
protein F32F2.1 protein.
Length = 919
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/62 (24%), Positives = 28/62 (45%)
Frame = +1
Query: 79 YLIFDSGGSKFLVQS*GKSSTSRRVNAGIRSEQSSGK*SRTSTALTPRVLTAATPTCSLT 258
Y I D SK+++Q ++ + +R + S +TP VL A T C++
Sbjct: 64 YRILDQNESKYILQQQSAAAIEEKKGTLLRRKSSKKLIEPLPMIITPPVLMARTQCCAVC 123
Query: 259 HQ 264
++
Sbjct: 124 YK 125
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,391,362
Number of Sequences: 27780
Number of extensions: 319131
Number of successful extensions: 1070
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1065
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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