Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0370
(548 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC041622-1|AAH41622.1| 681|Homo sapiens zinc finger protein 64 ... 33 0.87
BC012759-1|AAH12759.1| 681|Homo sapiens zinc finger protein 64 ... 33 0.87
AL121771-3|CAB90277.1| 627|Homo sapiens zinc finger protein 64 ... 33 0.87
AL121771-2|CAI21788.1| 679|Homo sapiens zinc finger protein 64 ... 33 0.87
AL121771-1|CAB90276.1| 681|Homo sapiens zinc finger protein 64 ... 33 0.87
AK001744-1|BAA91876.1| 627|Homo sapiens protein ( Homo sapiens ... 33 0.87
AK001596-1|BAA91777.1| 681|Homo sapiens protein ( Homo sapiens ... 33 0.87
U03272-1|AAA18950.1| 2911|Homo sapiens fibrillin-2 protein. 31 2.0
AB209735-1|BAD92972.1| 1976|Homo sapiens fibrillin 2 (congenital... 31 2.0
X63556-1|CAA45118.1| 3002|Homo sapiens fibrillin protein. 31 3.5
L13923-1|AAB02036.1| 2871|Homo sapiens fibrillin protein. 31 3.5
AB177803-1|BAD16739.1| 2871|Homo sapiens fibrillin 1 protein. 31 3.5
AK122706-1|BAC85504.1| 814|Homo sapiens ISOFORM. protein. 29 8.1
>BC041622-1|AAH41622.1| 681|Homo sapiens zinc finger protein 64
homolog (mouse) protein.
Length = 681
Score = 32.7 bits (71), Expect = 0.87
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 164 RXRHAGKXACCPACVTLXXEGATCKIYSK-EQAKPPPLCVRSLSNASKEFALSLCSRFH 337
R +H+G CP C L AT + +S+ Q++ P C + S + AL + R H
Sbjct: 307 RIKHSGNNFKCPHCDFLGDSKATLRKHSRVHQSEHPEKCSECSYSCSSKAALRIHERIH 365
>BC012759-1|AAH12759.1| 681|Homo sapiens zinc finger protein 64
homolog (mouse) protein.
Length = 681
Score = 32.7 bits (71), Expect = 0.87
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 164 RXRHAGKXACCPACVTLXXEGATCKIYSK-EQAKPPPLCVRSLSNASKEFALSLCSRFH 337
R +H+G CP C L AT + +S+ Q++ P C + S + AL + R H
Sbjct: 307 RIKHSGNNFKCPHCDFLGDSKATLRKHSRVHQSEHPEKCSECSYSCSSKAALRIHERIH 365
>AL121771-3|CAB90277.1| 627|Homo sapiens zinc finger protein 64
homolog (mouse) protein.
Length = 627
Score = 32.7 bits (71), Expect = 0.87
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 164 RXRHAGKXACCPACVTLXXEGATCKIYSK-EQAKPPPLCVRSLSNASKEFALSLCSRFH 337
R +H+G CP C L AT + +S+ Q++ P C + S + AL + R H
Sbjct: 253 RIKHSGNNFKCPHCDFLGDSKATLRKHSRVHQSEHPEKCSECSYSCSSKAALRIHERIH 311
>AL121771-2|CAI21788.1| 679|Homo sapiens zinc finger protein 64
homolog (mouse) protein.
Length = 679
Score = 32.7 bits (71), Expect = 0.87
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 164 RXRHAGKXACCPACVTLXXEGATCKIYSK-EQAKPPPLCVRSLSNASKEFALSLCSRFH 337
R +H+G CP C L AT + +S+ Q++ P C + S + AL + R H
Sbjct: 305 RIKHSGNNFKCPHCDFLGDSKATLRKHSRVHQSEHPEKCSECSYSCSSKAALRIHERIH 363
>AL121771-1|CAB90276.1| 681|Homo sapiens zinc finger protein 64
homolog (mouse) protein.
Length = 681
Score = 32.7 bits (71), Expect = 0.87
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 164 RXRHAGKXACCPACVTLXXEGATCKIYSK-EQAKPPPLCVRSLSNASKEFALSLCSRFH 337
R +H+G CP C L AT + +S+ Q++ P C + S + AL + R H
Sbjct: 307 RIKHSGNNFKCPHCDFLGDSKATLRKHSRVHQSEHPEKCSECSYSCSSKAALRIHERIH 365
>AK001744-1|BAA91876.1| 627|Homo sapiens protein ( Homo sapiens
cDNA FLJ10882 fis, clone NT2RP4001938, weakly similar to
TRANSCRIPTIONAL REPRESSOR CTCF. ).
Length = 627
Score = 32.7 bits (71), Expect = 0.87
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 164 RXRHAGKXACCPACVTLXXEGATCKIYSK-EQAKPPPLCVRSLSNASKEFALSLCSRFH 337
R +H+G CP C L AT + +S+ Q++ P C + S + AL + R H
Sbjct: 253 RIKHSGNNFKCPHCDFLGDSKATLRKHSRVHQSEHPEKCSECSYSCSSKAALRIHERIH 311
>AK001596-1|BAA91777.1| 681|Homo sapiens protein ( Homo sapiens
cDNA FLJ10734 fis, clone NT2RP3001398, weakly similar to
TRANSCRIPTIONAL REPRESSOR CTCF. ).
Length = 681
Score = 32.7 bits (71), Expect = 0.87
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 164 RXRHAGKXACCPACVTLXXEGATCKIYSK-EQAKPPPLCVRSLSNASKEFALSLCSRFH 337
R +H+G CP C L AT + +S+ Q++ P C + S + AL + R H
Sbjct: 307 RIKHSGNNFKCPHCDFLGDSKATLRKHSRVHQSEHPEKCSECSYSCSSKAALRIHERIH 365
>U03272-1|AAA18950.1| 2911|Homo sapiens fibrillin-2 protein.
Length = 2911
Score = 31.5 bits (68), Expect = 2.0
Identities = 27/84 (32%), Positives = 33/84 (39%), Gaps = 7/84 (8%)
Frame = +2
Query: 59 CVASEXYGALVCGTDYCEKNPCIQPPLVCP---KNTEHRXRHAGKXAC-CPACVTLXXEG 226
C Y + GT + + C Q P C KNTE G C CP L +G
Sbjct: 2473 CFCKVGYTTDISGTSCIDLDECSQSPKPCNYICKNTE------GSYQCSCPRGYVLQEDG 2526
Query: 227 ATCKIYSKEQAKPPP---LCVRSL 289
TCK + Q K LCV +L
Sbjct: 2527 KTCKDLDECQTKQHNCQFLCVNTL 2550
>AB209735-1|BAD92972.1| 1976|Homo sapiens fibrillin 2 (congenital
contractural arachnodactyly) variant protein.
Length = 1976
Score = 31.5 bits (68), Expect = 2.0
Identities = 27/84 (32%), Positives = 33/84 (39%), Gaps = 7/84 (8%)
Frame = +2
Query: 59 CVASEXYGALVCGTDYCEKNPCIQPPLVCP---KNTEHRXRHAGKXAC-CPACVTLXXEG 226
C Y + GT + + C Q P C KNTE G C CP L +G
Sbjct: 1538 CFCKVGYTTDISGTSCIDLDECSQSPKPCNYICKNTE------GSYQCSCPRGYVLQEDG 1591
Query: 227 ATCKIYSKEQAKPPP---LCVRSL 289
TCK + Q K LCV +L
Sbjct: 1592 KTCKDLDECQTKQHNCQFLCVNTL 1615
>X63556-1|CAA45118.1| 3002|Homo sapiens fibrillin protein.
Length = 3002
Score = 30.7 bits (66), Expect = 3.5
Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 4/64 (6%)
Frame = +2
Query: 59 CVASEXYGALVCGTDYCEKNPCIQPPLVCP---KNTEHRXRHAGKXAC-CPACVTLXXEG 226
C+ Y + GT + N C Q P C KNTE G C CP L +G
Sbjct: 2558 CICKTGYTPDITGTSCVDLNECNQAPKPCNFICKNTE------GSYQCSCPKGYILQEDG 2611
Query: 227 ATCK 238
+CK
Sbjct: 2612 RSCK 2615
>L13923-1|AAB02036.1| 2871|Homo sapiens fibrillin protein.
Length = 2871
Score = 30.7 bits (66), Expect = 3.5
Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 4/64 (6%)
Frame = +2
Query: 59 CVASEXYGALVCGTDYCEKNPCIQPPLVCP---KNTEHRXRHAGKXAC-CPACVTLXXEG 226
C+ Y + GT + N C Q P C KNTE G C CP L +G
Sbjct: 2427 CICKTGYTPDITGTSCVDLNECNQAPKPCNFICKNTE------GSYQCSCPKGYILQEDG 2480
Query: 227 ATCK 238
+CK
Sbjct: 2481 RSCK 2484
>AB177803-1|BAD16739.1| 2871|Homo sapiens fibrillin 1 protein.
Length = 2871
Score = 30.7 bits (66), Expect = 3.5
Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 4/64 (6%)
Frame = +2
Query: 59 CVASEXYGALVCGTDYCEKNPCIQPPLVCP---KNTEHRXRHAGKXAC-CPACVTLXXEG 226
C+ Y + GT + N C Q P C KNTE G C CP L +G
Sbjct: 2427 CICKTGYTPDITGTSCVDLNECNQAPKPCNFICKNTE------GSYQCSCPKGYILQEDG 2480
Query: 227 ATCK 238
+CK
Sbjct: 2481 RSCK 2484
>AK122706-1|BAC85504.1| 814|Homo sapiens ISOFORM. protein.
Length = 814
Score = 29.5 bits (63), Expect = 8.1
Identities = 22/72 (30%), Positives = 29/72 (40%), Gaps = 2/72 (2%)
Frame = +2
Query: 95 GTDYCEKNPCIQPPLVCPKNTEHRXRHAGKXA--CCPACVTLXXEGATCKIYSKEQAKPP 268
G+ CE PC PP+ C RH GK CCP C +G + + +
Sbjct: 337 GSVQCEPLPC--PPVPC--------RHPGKIPGQCCPVCDGCEYQGHQYQSQETFRLQER 386
Query: 269 PLCVRSLSNASK 304
LCVR A +
Sbjct: 387 GLCVRCSCQAGE 398
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,055,172
Number of Sequences: 237096
Number of extensions: 1418170
Number of successful extensions: 2730
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2730
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5421005376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -