Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0370
         (548 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92804-2|CAB07253.2|  321|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z95559-9|CAI46625.1|  510|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z82272-6|CAB05222.1| 1431|Caenorhabditis elegans Hypothetical pr...    27   8.9  
U88314-6|AAF99886.1|  240|Caenorhabditis elegans Hypothetical pr...    27   8.9  

>Z92804-2|CAB07253.2|  321|Caenorhabditis elegans Hypothetical
           protein K05D4.3 protein.
          Length = 321

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 10/33 (30%), Positives = 23/33 (69%)
 Frame = -1

Query: 392 IIFRTGRDRSIASLYFPANENDYTSLVQTLLMH 294
           ++FR+ R R  ++  FP  ++ Y+++V+T ++H
Sbjct: 47  VVFRSNRQRDRSTPIFPIIKHFYSTVVRTYILH 79


>Z95559-9|CAI46625.1|  510|Caenorhabditis elegans Hypothetical
           protein Y41E3.18 protein.
          Length = 510

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +2

Query: 149 KNTEHRXRHAGKXACCPACVTLXXEGA 229
           K T HR +H    ACCP C  +    A
Sbjct: 147 KGTWHRVKHVVFVACCPPCCCIIQRSA 173


>Z82272-6|CAB05222.1| 1431|Caenorhabditis elegans Hypothetical
           protein F55G11.9 protein.
          Length = 1431

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 15/45 (33%), Positives = 27/45 (60%)
 Frame = -3

Query: 519 GLPVNTYYFISFLFGLLKIHIF*FQISIFTTVHIIINFIPYTNYI 385
           GLP+  +Y   F+FG+LK     F I++F+ +  ++ F P + Y+
Sbjct: 232 GLPIWIFYMEHFIFGVLKTT---FLITLFSILWPLL-FEPVSMYV 272


>U88314-6|AAF99886.1|  240|Caenorhabditis elegans Hypothetical
           protein C46H11.7 protein.
          Length = 240

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
 Frame = +2

Query: 8   VFKNFKMKTLIFIMLVACVASEXYGALVCGTDYCEKNPC-IQPPLVCPKNT 157
           +F+ F +   IF +  AC ASE  G    G   C+   C +     CP  T
Sbjct: 1   MFRQFIISFAIFSVAFACEASESEGPCDGGILVCQTQVCDVAAGQCCPVTT 51


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,267,889
Number of Sequences: 27780
Number of extensions: 242396
Number of successful extensions: 517
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 517
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)