Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0368
         (598 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132898-6|CAC14409.1|  187|Caenorhabditis elegans Hypothetical ...    31   0.62 
AL132898-5|CAC14408.1|  316|Caenorhabditis elegans Hypothetical ...    31   0.62 
Z81567-5|CAB04588.2|  154|Caenorhabditis elegans Hypothetical pr...    30   1.1  
Z83108-2|CAB05510.1|  820|Caenorhabditis elegans Hypothetical pr...    29   3.3  

>AL132898-6|CAC14409.1|  187|Caenorhabditis elegans Hypothetical
           protein Y59A8B.9 protein.
          Length = 187

 Score = 31.1 bits (67), Expect = 0.62
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = -3

Query: 224 GPADGALLLSPSRKHFLFICVEPGSTPRCPSGXPSMSPQKGSPA 93
           GPA GA   +PSR     +  +P +T R P+  P+  P + +P+
Sbjct: 14  GPAAGASAKTPSRMPARSVPQKPVTTMRTPAATPAAPPTRPTPS 57


>AL132898-5|CAC14408.1|  316|Caenorhabditis elegans Hypothetical
           protein Y59A8B.7 protein.
          Length = 316

 Score = 31.1 bits (67), Expect = 0.62
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = -3

Query: 224 GPADGALLLSPSRKHFLFICVEPGSTPRCPSGXPSMSPQKGSPA 93
           GPA GA   +PSR     +  +P +T R P+  P+  P + +P+
Sbjct: 143 GPAAGASAKTPSRMPARSVPQKPVTTMRTPAATPAAPPTRPTPS 186


>Z81567-5|CAB04588.2|  154|Caenorhabditis elegans Hypothetical
           protein K08C9.7 protein.
          Length = 154

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 17/43 (39%), Positives = 25/43 (58%)
 Frame = -3

Query: 197 SPSRKHFLFICVEPGSTPRCPSGXPSMSPQKGSPASQPYTLNR 69
           SPS K+F     E G   R P+G P++S Q+ +  +QP TL +
Sbjct: 107 SPSPKYFKID--ENGKISRLPTGIPTVSIQREAFMTQPTTLRK 147


>Z83108-2|CAB05510.1|  820|Caenorhabditis elegans Hypothetical
           protein F44E5.2 protein.
          Length = 820

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 11/21 (52%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
 Frame = +2

Query: 2   CGAHVFACVVNFFG-CSRLPP 61
           C  H+F C + FFG CSR  P
Sbjct: 555 CDRHIFRCSIPFFGFCSRCEP 575


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,601,076
Number of Sequences: 27780
Number of extensions: 318436
Number of successful extensions: 859
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 859
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)