Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0364
         (598 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   3.4  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   6.0  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   7.9  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   7.9  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   7.9  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 3/34 (8%)
 Frame = +1

Query: 148  HLQLT---NVGINPASISFNTLTMESDKFICVRE 240
            HL++T   N G N A   F TLT+        RE
Sbjct: 1561 HLRVTAHNNAGFNVAEYEFATLTVTGGTIAPARE 1594


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = -1

Query: 127 ILAPCLLITPSYTNRKRKNGRP 62
           +  PC   TP       KNG+P
Sbjct: 381 VYIPCWNATPEIITYLEKNGKP 402


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +3

Query: 126 ITDTVSRTFTAYQCGNQSC 182
           +TD + +T  A+  GN +C
Sbjct: 79  LTDIIWKTTVAWYAGNVAC 97


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 145 LETVSVILAPCLLITPSYTN 86
           LE  +V+ A C + TP+ TN
Sbjct: 127 LELYTVLGAACQVCTPNATN 146


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 145 LETVSVILAPCLLITPSYTN 86
           LE  +V+ A C + TP+ TN
Sbjct: 127 LELYTVLGAACQVCTPNATN 146


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,339
Number of Sequences: 336
Number of extensions: 2360
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)