Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0364
         (598 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D21260-1|BAA04801.2| 1685|Homo sapiens KIAA0034 protein.              136   6e-32
BC054489-1|AAH54489.1| 1675|Homo sapiens clathrin, heavy chain (...   136   6e-32
BC051800-1|AAH51800.1| 1639|Homo sapiens CLTC protein protein.        136   6e-32
X95486-1|CAA64752.1| 1640|Homo sapiens clathrin heavy chain poly...   131   2e-30
U60803-1|AAB40909.1| 1569|Homo sapiens clathrin heavy chain 2 pr...   131   2e-30
U60802-1|AAB40908.1| 1626|Homo sapiens clathrin heavy chain 2 pr...   131   2e-30
U41763-1|AAC50494.1| 1640|Homo sapiens muscle clathrin heavy cha...   131   2e-30
BC110893-1|AAI10894.1|  480|Homo sapiens C19orf55 protein protein.     30   7.2  
AY971111-1|AAY18532.1|  159|Homo sapiens immunoglobulin alpha he...    29   9.5  

>D21260-1|BAA04801.2| 1685|Homo sapiens KIAA0034 protein.
          Length = 1685

 Score =  136 bits (329), Expect = 6e-32
 Identities = 74/123 (60%), Positives = 84/123 (68%), Gaps = 3/123 (2%)
 Frame = +3

Query: 225 YLCSREGW*D-AXVVXIDMADPTNPIRRPISADSAIMNPASKVIALKGKAGVEAQKTLQI 401
           ++C RE   + A VV IDM DP+NPIRRPISADSAIMNPASKVIALK      A KTLQI
Sbjct: 47  FICIREKVGEQAQVVIIDMNDPSNPIRRPISADSAIMNPASKVIALK------AGKTLQI 100

Query: 402 FNIEMKSKMXAHTMXXDXVFWKWISLNTLGSGHQDVXYHWSXEGDSXTRK--DVRQAFVA 575
           FNIEMKSKM AHTM  D  FWKWISLNT+     +  YHWS EG+S   K  D   +   
Sbjct: 101 FNIEMKSKMKAHTMTDDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAG 160

Query: 576 CRL 584
           C++
Sbjct: 161 CQI 163



 Score = 88.6 bits (210), Expect = 1e-17
 Identities = 39/46 (84%), Positives = 44/46 (95%)
 Frame = +1

Query: 115 MAQVLPIRFQEHLQLTNVGINPASISFNTLTMESDKFICVREKVGE 252
           MAQ+LPIRFQEHLQL N+GINPA+I F+TLTMESDKFIC+REKVGE
Sbjct: 11  MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGE 56



 Score = 33.1 bits (72), Expect = 0.77
 Identities = 14/16 (87%), Positives = 14/16 (87%)
 Frame = +1

Query: 544 PGKMFDRHSSLADCQI 591
           P KMFDRHSSLA CQI
Sbjct: 148 PVKMFDRHSSLAGCQI 163


>BC054489-1|AAH54489.1| 1675|Homo sapiens clathrin, heavy chain (Hc)
           protein.
          Length = 1675

 Score =  136 bits (329), Expect = 6e-32
 Identities = 74/123 (60%), Positives = 84/123 (68%), Gaps = 3/123 (2%)
 Frame = +3

Query: 225 YLCSREGW*D-AXVVXIDMADPTNPIRRPISADSAIMNPASKVIALKGKAGVEAQKTLQI 401
           ++C RE   + A VV IDM DP+NPIRRPISADSAIMNPASKVIALK      A KTLQI
Sbjct: 37  FICIREKVGEQAQVVIIDMNDPSNPIRRPISADSAIMNPASKVIALK------AGKTLQI 90

Query: 402 FNIEMKSKMXAHTMXXDXVFWKWISLNTLGSGHQDVXYHWSXEGDSXTRK--DVRQAFVA 575
           FNIEMKSKM AHTM  D  FWKWISLNT+     +  YHWS EG+S   K  D   +   
Sbjct: 91  FNIEMKSKMKAHTMTDDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAG 150

Query: 576 CRL 584
           C++
Sbjct: 151 CQI 153



 Score = 88.6 bits (210), Expect = 1e-17
 Identities = 39/46 (84%), Positives = 44/46 (95%)
 Frame = +1

Query: 115 MAQVLPIRFQEHLQLTNVGINPASISFNTLTMESDKFICVREKVGE 252
           MAQ+LPIRFQEHLQL N+GINPA+I F+TLTMESDKFIC+REKVGE
Sbjct: 1   MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGE 46



 Score = 33.1 bits (72), Expect = 0.77
 Identities = 14/16 (87%), Positives = 14/16 (87%)
 Frame = +1

Query: 544 PGKMFDRHSSLADCQI 591
           P KMFDRHSSLA CQI
Sbjct: 138 PVKMFDRHSSLAGCQI 153


>BC051800-1|AAH51800.1| 1639|Homo sapiens CLTC protein protein.
          Length = 1639

 Score =  136 bits (329), Expect = 6e-32
 Identities = 74/123 (60%), Positives = 84/123 (68%), Gaps = 3/123 (2%)
 Frame = +3

Query: 225 YLCSREGW*D-AXVVXIDMADPTNPIRRPISADSAIMNPASKVIALKGKAGVEAQKTLQI 401
           ++C RE   + A VV IDM DP+NPIRRPISADSAIMNPASKVIALK      A KTLQI
Sbjct: 37  FICIREKVGEQAQVVIIDMNDPSNPIRRPISADSAIMNPASKVIALK------AGKTLQI 90

Query: 402 FNIEMKSKMXAHTMXXDXVFWKWISLNTLGSGHQDVXYHWSXEGDSXTRK--DVRQAFVA 575
           FNIEMKSKM AHTM  D  FWKWISLNT+     +  YHWS EG+S   K  D   +   
Sbjct: 91  FNIEMKSKMKAHTMTDDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAG 150

Query: 576 CRL 584
           C++
Sbjct: 151 CQI 153



 Score = 88.6 bits (210), Expect = 1e-17
 Identities = 39/46 (84%), Positives = 44/46 (95%)
 Frame = +1

Query: 115 MAQVLPIRFQEHLQLTNVGINPASISFNTLTMESDKFICVREKVGE 252
           MAQ+LPIRFQEHLQL N+GINPA+I F+TLTMESDKFIC+REKVGE
Sbjct: 1   MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGE 46



 Score = 33.1 bits (72), Expect = 0.77
 Identities = 14/16 (87%), Positives = 14/16 (87%)
 Frame = +1

Query: 544 PGKMFDRHSSLADCQI 591
           P KMFDRHSSLA CQI
Sbjct: 138 PVKMFDRHSSLAGCQI 153


>X95486-1|CAA64752.1| 1640|Homo sapiens clathrin heavy chain
           polypeptide protein.
          Length = 1640

 Score =  131 bits (317), Expect = 2e-30
 Identities = 70/123 (56%), Positives = 84/123 (68%), Gaps = 3/123 (2%)
 Frame = +3

Query: 225 YLCSREGW*D-AXVVXIDMADPTNPIRRPISADSAIMNPASKVIALKGKAGVEAQKTLQI 401
           ++C RE   + A V  IDM+DP  PIRRPISA+SAIMNPASKVIALK      A KTLQI
Sbjct: 37  FICIREKVGEQAQVTIIDMSDPMAPIRRPISAESAIMNPASKVIALK------AGKTLQI 90

Query: 402 FNIEMKSKMXAHTMXXDXVFWKWISLNTLGSGHQDVXYHWSXEGDSXTRK--DVRQAFVA 575
           FNIEMKSKM AHTM  + +FWKW+S+NT+    +   YHWS EGDS   K  D   + V 
Sbjct: 91  FNIEMKSKMKAHTMAEEVIFWKWVSVNTVALVTETAVYHWSMEGDSQPMKMFDRHTSLVG 150

Query: 576 CRL 584
           C++
Sbjct: 151 CQV 153



 Score = 86.6 bits (205), Expect = 6e-17
 Identities = 37/46 (80%), Positives = 43/46 (93%)
 Frame = +1

Query: 115 MAQVLPIRFQEHLQLTNVGINPASISFNTLTMESDKFICVREKVGE 252
           MAQ+LP+RFQEH QL N+GINPA+I F+TLTMESDKFIC+REKVGE
Sbjct: 1   MAQILPVRFQEHFQLQNLGINPANIGFSTLTMESDKFICIREKVGE 46



 Score = 31.1 bits (67), Expect = 3.1
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +1

Query: 490 ALVTKMWXTTGRXKATRXPGKMFDRHSSLADCQI 591
           ALVT+        +    P KMFDRH+SL  CQ+
Sbjct: 120 ALVTETAVYHWSMEGDSQPMKMFDRHTSLVGCQV 153


>U60803-1|AAB40909.1| 1569|Homo sapiens clathrin heavy chain 2
           protein.
          Length = 1569

 Score =  131 bits (317), Expect = 2e-30
 Identities = 70/123 (56%), Positives = 84/123 (68%), Gaps = 3/123 (2%)
 Frame = +3

Query: 225 YLCSREGW*D-AXVVXIDMADPTNPIRRPISADSAIMNPASKVIALKGKAGVEAQKTLQI 401
           ++C RE   + A V  IDM+DP  PIRRPISA+SAIMNPASKVIALK      A KTLQI
Sbjct: 37  FICIREKVGEQAQVTIIDMSDPMAPIRRPISAESAIMNPASKVIALK------AGKTLQI 90

Query: 402 FNIEMKSKMXAHTMXXDXVFWKWISLNTLGSGHQDVXYHWSXEGDSXTRK--DVRQAFVA 575
           FNIEMKSKM AHTM  + +FWKW+S+NT+    +   YHWS EGDS   K  D   + V 
Sbjct: 91  FNIEMKSKMKAHTMAEEVIFWKWVSVNTVALVTETAVYHWSMEGDSQPMKMFDRHTSLVG 150

Query: 576 CRL 584
           C++
Sbjct: 151 CQV 153



 Score = 86.6 bits (205), Expect = 6e-17
 Identities = 37/46 (80%), Positives = 43/46 (93%)
 Frame = +1

Query: 115 MAQVLPIRFQEHLQLTNVGINPASISFNTLTMESDKFICVREKVGE 252
           MAQ+LP+RFQEH QL N+GINPA+I F+TLTMESDKFIC+REKVGE
Sbjct: 1   MAQILPVRFQEHFQLQNLGINPANIGFSTLTMESDKFICIREKVGE 46



 Score = 31.1 bits (67), Expect = 3.1
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +1

Query: 490 ALVTKMWXTTGRXKATRXPGKMFDRHSSLADCQI 591
           ALVT+        +    P KMFDRH+SL  CQ+
Sbjct: 120 ALVTETAVYHWSMEGDSQPMKMFDRHTSLVGCQV 153


>U60802-1|AAB40908.1| 1626|Homo sapiens clathrin heavy chain 2
           protein.
          Length = 1626

 Score =  131 bits (317), Expect = 2e-30
 Identities = 70/123 (56%), Positives = 84/123 (68%), Gaps = 3/123 (2%)
 Frame = +3

Query: 225 YLCSREGW*D-AXVVXIDMADPTNPIRRPISADSAIMNPASKVIALKGKAGVEAQKTLQI 401
           ++C RE   + A V  IDM+DP  PIRRPISA+SAIMNPASKVIALK      A KTLQI
Sbjct: 37  FICIREKVGEQAQVTIIDMSDPMAPIRRPISAESAIMNPASKVIALK------AGKTLQI 90

Query: 402 FNIEMKSKMXAHTMXXDXVFWKWISLNTLGSGHQDVXYHWSXEGDSXTRK--DVRQAFVA 575
           FNIEMKSKM AHTM  + +FWKW+S+NT+    +   YHWS EGDS   K  D   + V 
Sbjct: 91  FNIEMKSKMKAHTMAEEVIFWKWVSVNTVALVTETAVYHWSMEGDSQPMKMFDRHTSLVG 150

Query: 576 CRL 584
           C++
Sbjct: 151 CQV 153



 Score = 86.6 bits (205), Expect = 6e-17
 Identities = 37/46 (80%), Positives = 43/46 (93%)
 Frame = +1

Query: 115 MAQVLPIRFQEHLQLTNVGINPASISFNTLTMESDKFICVREKVGE 252
           MAQ+LP+RFQEH QL N+GINPA+I F+TLTMESDKFIC+REKVGE
Sbjct: 1   MAQILPVRFQEHFQLQNLGINPANIGFSTLTMESDKFICIREKVGE 46



 Score = 31.1 bits (67), Expect = 3.1
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +1

Query: 490 ALVTKMWXTTGRXKATRXPGKMFDRHSSLADCQI 591
           ALVT+        +    P KMFDRH+SL  CQ+
Sbjct: 120 ALVTETAVYHWSMEGDSQPMKMFDRHTSLVGCQV 153


>U41763-1|AAC50494.1| 1640|Homo sapiens muscle clathrin heavy chain
           protein.
          Length = 1640

 Score =  131 bits (317), Expect = 2e-30
 Identities = 70/123 (56%), Positives = 84/123 (68%), Gaps = 3/123 (2%)
 Frame = +3

Query: 225 YLCSREGW*D-AXVVXIDMADPTNPIRRPISADSAIMNPASKVIALKGKAGVEAQKTLQI 401
           ++C RE   + A V  IDM+DP  PIRRPISA+SAIMNPASKVIALK      A KTLQI
Sbjct: 37  FICIREKVGEQAQVTIIDMSDPMAPIRRPISAESAIMNPASKVIALK------AGKTLQI 90

Query: 402 FNIEMKSKMXAHTMXXDXVFWKWISLNTLGSGHQDVXYHWSXEGDSXTRK--DVRQAFVA 575
           FNIEMKSKM AHTM  + +FWKW+S+NT+    +   YHWS EGDS   K  D   + V 
Sbjct: 91  FNIEMKSKMKAHTMAEEVIFWKWVSVNTVALVTETAVYHWSMEGDSQPMKMFDRHTSLVG 150

Query: 576 CRL 584
           C++
Sbjct: 151 CQV 153



 Score = 86.6 bits (205), Expect = 6e-17
 Identities = 37/46 (80%), Positives = 43/46 (93%)
 Frame = +1

Query: 115 MAQVLPIRFQEHLQLTNVGINPASISFNTLTMESDKFICVREKVGE 252
           MAQ+LP+RFQEH QL N+GINPA+I F+TLTMESDKFIC+REKVGE
Sbjct: 1   MAQILPVRFQEHFQLQNLGINPANIGFSTLTMESDKFICIREKVGE 46



 Score = 31.1 bits (67), Expect = 3.1
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +1

Query: 490 ALVTKMWXTTGRXKATRXPGKMFDRHSSLADCQI 591
           ALVT+        +    P KMFDRH+SL  CQ+
Sbjct: 120 ALVTETAVYHWSMEGDSQPMKMFDRHTSLVGCQV 153


>BC110893-1|AAI10894.1|  480|Homo sapiens C19orf55 protein protein.
          Length = 480

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 21/57 (36%), Positives = 23/57 (40%)
 Frame = +2

Query: 407 HRDEIQNXGAHHXRRXCFLEVDFTEHTRLWSPRCGVPLVDXRRLXHPERCSTGIRRL 577
           HR E+         R  FL +D  E    WSP  G P    RRL   E  S   RRL
Sbjct: 425 HRAELSRQKREADARLSFL-LDQAEDLGSWSPPAGSPPRSPRRLLRREGDSLEARRL 480


>AY971111-1|AAY18532.1|  159|Homo sapiens immunoglobulin alpha heavy
           chain variable region protein.
          Length = 159

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 16/58 (27%), Positives = 26/58 (44%)
 Frame = +3

Query: 141 SRTFTAYQCGNQSCFYFFQHSHHGIGQVYLCSREGW*DAXVVXIDMADPTNPIRRPIS 314
           S T T+    + + +Y  +     IGQ    + E W    +V +  A PT+P   P+S
Sbjct: 81  SLTLTSVTAADTAVYYCAREGRGRIGQAVSGTFEYWGQGILVTVSSASPTSPKVFPLS 138


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,975,850
Number of Sequences: 237096
Number of extensions: 1423852
Number of successful extensions: 6667
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6659
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)