Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0363
         (598 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

V00200-1|CAA23486.2|  469|Drosophila melanogaster collagen protein.    32   0.51 
M96575-1|AAB59184.1| 1775|Drosophila melanogaster type IV collag...    32   0.51 
M23704-1|AAA28404.1| 1775|Drosophila melanogaster alpha-1 type I...    32   0.51 
J02727-1|AAA28423.1| 1775|Drosophila melanogaster type IV pro-co...    32   0.51 
AE014134-846|AAN10520.1| 1779|Drosophila melanogaster CG4145-PC,...    32   0.51 
AE014134-845|AAN10519.1| 1779|Drosophila melanogaster CG4145-PB,...    32   0.51 
AE014134-844|AAF52204.1| 1779|Drosophila melanogaster CG4145-PA,...    32   0.51 
AY075214-1|AAL68081.1|  520|Drosophila melanogaster AT15281p pro...    31   0.90 
AF384215-1|AAL40920.1|  520|Drosophila melanogaster adenosine de...    31   0.90 
AE014296-2953|AAF49307.1|  520|Drosophila melanogaster CG5998-PA...    31   0.90 
BT021307-1|AAX33455.1|  118|Drosophila melanogaster RE17110p pro...    29   3.6  
AE014296-2016|AAF50020.1|   91|Drosophila melanogaster CG14132-P...    29   3.6  
AE013599-2353|AAF57947.2|  463|Drosophila melanogaster CG6301-PA...    29   6.3  

>V00200-1|CAA23486.2|  469|Drosophila melanogaster collagen protein.
          Length = 469

 Score = 32.3 bits (70), Expect = 0.51
 Identities = 18/46 (39%), Positives = 25/46 (54%)
 Frame = +3

Query: 396 GQPGELFPDKPWKGQQNEPNPAVVRNERHPADTGRWRAQGQASPGI 533
           G PG L  D   KGQ+ EP P+ +R +  PA T  W  + +  PG+
Sbjct: 291 GPPG-LPGDASEKGQKGEPGPSGLRGDTGPAGTPGWPGE-KGLPGL 334


>M96575-1|AAB59184.1| 1775|Drosophila melanogaster type IV collagen
            protein.
          Length = 1775

 Score = 32.3 bits (70), Expect = 0.51
 Identities = 18/46 (39%), Positives = 25/46 (54%)
 Frame = +3

Query: 396  GQPGELFPDKPWKGQQNEPNPAVVRNERHPADTGRWRAQGQASPGI 533
            G PG L  D   KGQ+ EP P+ +R +  PA T  W  + +  PG+
Sbjct: 1052 GPPG-LPGDASEKGQKGEPGPSGLRGDTGPAGTPGWPGE-KGLPGL 1095


>M23704-1|AAA28404.1| 1775|Drosophila melanogaster alpha-1 type IV
            collagen protein.
          Length = 1775

 Score = 32.3 bits (70), Expect = 0.51
 Identities = 18/46 (39%), Positives = 25/46 (54%)
 Frame = +3

Query: 396  GQPGELFPDKPWKGQQNEPNPAVVRNERHPADTGRWRAQGQASPGI 533
            G PG L  D   KGQ+ EP P+ +R +  PA T  W  + +  PG+
Sbjct: 1052 GPPG-LPGDASEKGQKGEPGPSGLRGDTGPAGTPGWPGE-KGLPGL 1095


>J02727-1|AAA28423.1| 1775|Drosophila melanogaster type IV
            pro-collagen protein.
          Length = 1775

 Score = 32.3 bits (70), Expect = 0.51
 Identities = 18/46 (39%), Positives = 25/46 (54%)
 Frame = +3

Query: 396  GQPGELFPDKPWKGQQNEPNPAVVRNERHPADTGRWRAQGQASPGI 533
            G PG L  D   KGQ+ EP P+ +R +  PA T  W  + +  PG+
Sbjct: 1052 GPPG-LPGDASEKGQKGEPGPSGLRGDTGPAGTPGWPGE-KGLPGL 1095


>AE014134-846|AAN10520.1| 1779|Drosophila melanogaster CG4145-PC,
            isoform C protein.
          Length = 1779

 Score = 32.3 bits (70), Expect = 0.51
 Identities = 18/46 (39%), Positives = 25/46 (54%)
 Frame = +3

Query: 396  GQPGELFPDKPWKGQQNEPNPAVVRNERHPADTGRWRAQGQASPGI 533
            G PG L  D   KGQ+ EP P+ +R +  PA T  W  + +  PG+
Sbjct: 1052 GPPG-LPGDASEKGQKGEPGPSGLRGDTGPAGTPGWPGE-KGLPGL 1095


>AE014134-845|AAN10519.1| 1779|Drosophila melanogaster CG4145-PB,
            isoform B protein.
          Length = 1779

 Score = 32.3 bits (70), Expect = 0.51
 Identities = 18/46 (39%), Positives = 25/46 (54%)
 Frame = +3

Query: 396  GQPGELFPDKPWKGQQNEPNPAVVRNERHPADTGRWRAQGQASPGI 533
            G PG L  D   KGQ+ EP P+ +R +  PA T  W  + +  PG+
Sbjct: 1052 GPPG-LPGDASEKGQKGEPGPSGLRGDTGPAGTPGWPGE-KGLPGL 1095


>AE014134-844|AAF52204.1| 1779|Drosophila melanogaster CG4145-PA,
            isoform A protein.
          Length = 1779

 Score = 32.3 bits (70), Expect = 0.51
 Identities = 18/46 (39%), Positives = 25/46 (54%)
 Frame = +3

Query: 396  GQPGELFPDKPWKGQQNEPNPAVVRNERHPADTGRWRAQGQASPGI 533
            G PG L  D   KGQ+ EP P+ +R +  PA T  W  + +  PG+
Sbjct: 1052 GPPG-LPGDASEKGQKGEPGPSGLRGDTGPAGTPGWPGE-KGLPGL 1095


>AY075214-1|AAL68081.1|  520|Drosophila melanogaster AT15281p
           protein.
          Length = 520

 Score = 31.5 bits (68), Expect = 0.90
 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
 Frame = +1

Query: 100 LPALSAEDVSYQACVDKYSRKGYQPWQE----WSDHYTCHRY 213
           L +L+   + Y A V +  R GY+ WQE    W D    H+Y
Sbjct: 478 LKSLAINSIRYSALVGEEKRVGYRKWQEKWDKWIDDVVEHKY 519


>AF384215-1|AAL40920.1|  520|Drosophila melanogaster adenosine
           deaminase-related growthfactor B protein.
          Length = 520

 Score = 31.5 bits (68), Expect = 0.90
 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
 Frame = +1

Query: 100 LPALSAEDVSYQACVDKYSRKGYQPWQE----WSDHYTCHRY 213
           L +L+   + Y A V +  R GY+ WQE    W D    H+Y
Sbjct: 478 LKSLAINSIRYSALVGEEKRVGYRKWQEKWDKWIDDVVEHKY 519


>AE014296-2953|AAF49307.1|  520|Drosophila melanogaster CG5998-PA
           protein.
          Length = 520

 Score = 31.5 bits (68), Expect = 0.90
 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
 Frame = +1

Query: 100 LPALSAEDVSYQACVDKYSRKGYQPWQE----WSDHYTCHRY 213
           L +L+   + Y A V +  R GY+ WQE    W D    H+Y
Sbjct: 478 LKSLAINSIRYSALVGEEKRVGYRKWQEKWDKWIDDVVEHKY 519


>BT021307-1|AAX33455.1|  118|Drosophila melanogaster RE17110p
           protein.
          Length = 118

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +3

Query: 294 CHEYIEDENVEFPTCCARLRCV 359
           C E   D N  FP CC + +CV
Sbjct: 85  CEELPSDPNWRFPKCCPQFKCV 106


>AE014296-2016|AAF50020.1|   91|Drosophila melanogaster CG14132-PA
           protein.
          Length = 91

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +3

Query: 294 CHEYIEDENVEFPTCCARLRCV 359
           C E   D N  FP CC + +CV
Sbjct: 58  CEELPSDPNWRFPKCCPQFKCV 79


>AE013599-2353|AAF57947.2|  463|Drosophila melanogaster CG6301-PA
           protein.
          Length = 463

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 29/105 (27%), Positives = 44/105 (41%), Gaps = 4/105 (3%)
 Frame = +3

Query: 270 KIPENALECHEYIEDENVEFPTCCARLRCVVEVNGERIVQTRGQPGELFPDKPWKGQQNE 449
           +IP +  EC E     +V+FP CC       + +GE        PG+  P     G  + 
Sbjct: 342 QIPASFAECVETAVLTDVDFPQCCWTCADWADCDGE-----EPGPGDEAPAA--DGAADA 394

Query: 450 PNPAV---VRNERHPA-DTGRWRAQGQASPGIFNSRGAADGSDIS 572
           P PA     RN ++ A  T    ++   S G + S+ +   SD S
Sbjct: 395 PPPAARTHARNSKYQATTTDTTESERPRSKGKWGSKRSTTTSDES 439


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,980,856
Number of Sequences: 53049
Number of extensions: 689267
Number of successful extensions: 2049
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1937
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2046
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)