Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0359
(448 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g02870.1 68418.m00230 60S ribosomal protein L4/L1 (RPL4D) 60S... 99 7e-22
At3g09630.1 68416.m01142 60S ribosomal protein L4/L1 (RPL4A) str... 99 7e-22
At5g07520.1 68418.m00861 glycine-rich protein (GRP18) Oleosin; g... 34 0.038
At5g17650.1 68418.m02069 glycine/proline-rich protein glycine/pr... 31 0.35
At4g38770.1 68417.m05490 proline-rich family protein (PRP4) simi... 30 0.82
At1g57750.1 68414.m06552 cytochrome P450, putative similar to cy... 29 1.1
At3g24650.1 68416.m03095 abscisic acid-insensitive protein 3 (AB... 29 1.4
At4g39480.1 68417.m05585 cytochrome P450 family protein contains... 28 2.5
At3g22800.1 68416.m02874 leucine-rich repeat family protein / ex... 28 2.5
At1g76010.1 68414.m08825 expressed protein 27 4.4
At1g74290.1 68414.m08603 esterase/lipase/thioesterase family pro... 27 4.4
At1g74280.1 68414.m08602 hydrolase, alpha/beta fold family prote... 27 4.4
At1g48410.2 68414.m05409 argonaute protein (AGO1) identical to S... 27 4.4
At1g48410.1 68414.m05408 argonaute protein (AGO1) identical to S... 27 4.4
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 27 4.4
At5g26080.1 68418.m03103 proline-rich family protein contains pr... 27 5.8
At5g05340.1 68418.m00575 peroxidase, putative similar to peroxid... 27 5.8
At4g08960.1 68417.m01476 phosphotyrosyl phosphatase activator (P... 27 5.8
At2g35640.1 68415.m04371 hydroxyproline-rich glycoprotein family... 27 5.8
At2g05520.1 68415.m00584 glycine-rich protein (GRP) identical to... 27 5.8
At1g03050.1 68414.m00277 epsin N-terminal homology (ENTH) domain... 27 5.8
At3g62330.1 68416.m07002 zinc knuckle (CCHC-type) family protein... 27 7.6
At3g28840.1 68416.m03598 expressed protein 27 7.6
At3g12430.1 68416.m01548 expressed protein ; expression supporte... 27 7.6
At3g04640.1 68416.m00497 glycine-rich protein predicted proteins... 27 7.6
>At5g02870.1 68418.m00230 60S ribosomal protein L4/L1 (RPL4D) 60S
roibosomal protein L4, Arabidopsis thaliana,
EMBL:CAA79104
Length = 407
Score = 99 bits (238), Expect = 7e-22
Identities = 43/48 (89%), Positives = 45/48 (93%)
Frame = +1
Query: 256 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 399
QTSAESWGTGRAV+RIPRV GGGTHR+GQ AFGNMCRGGRMFAPTK W
Sbjct: 67 QTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIW 114
Score = 62.5 bits (145), Expect = 1e-10
Identities = 32/61 (52%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Frame = +2
Query: 77 SVARPLVSVYSEKSE--TVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 250
+ ARPLV+V + T Q LP V AP+RPD+VN VH +S NSRQPY VSK+A
Sbjct: 5 AAARPLVTVQGLDGDMSTDQSTTVTLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVSKKA 64
Query: 251 G 253
G
Sbjct: 65 G 65
>At3g09630.1 68416.m01142 60S ribosomal protein L4/L1 (RPL4A) strong
similarity to 60S ribosomal protein L1 GB:P49691
Length = 406
Score = 99 bits (238), Expect = 7e-22
Identities = 43/48 (89%), Positives = 45/48 (93%)
Frame = +1
Query: 256 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 399
QTSAESWGTGRAV+RIPRV GGGTHR+GQ AFGNMCRGGRMFAPTK W
Sbjct: 66 QTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIW 113
Score = 64.5 bits (150), Expect = 3e-11
Identities = 32/64 (50%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
Frame = +2
Query: 68 MSLSVARPLVSVYSEKSE--TVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVS 241
M+ + ARPLV++ + + T Q + LP V AP+RPD+VN VH +S NSRQPY VS
Sbjct: 1 MAAAAARPLVTIQTLDGDMSTDQSSTVVLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVS 60
Query: 242 KEAG 253
K+AG
Sbjct: 61 KKAG 64
>At5g07520.1 68418.m00861 glycine-rich protein (GRP18) Oleosin;
glycine-rich protein 18 (GRP18) PMID:11431566;
Length = 228
Score = 34.3 bits (75), Expect = 0.038
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Frame = +1
Query: 217 LEAALLREQGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQ---GAFGNMCRGGRMFAP 387
+ AL+R + G ++ +AE + + + ++P G G G+ G FGN GG F
Sbjct: 76 MAVALIRRRMG-AKPTAEGTSSAQPLLKLPVYGGYGGFWGGKKFSGTFGNKPGGGNPFGD 134
Query: 388 TKPWAGAGTVASTSDSG 438
W G G + G
Sbjct: 135 ISKWLGPGAAGGGAPGG 151
>At5g17650.1 68418.m02069 glycine/proline-rich protein
glycine/proline-rich protein GPRP - Arabidopsis
thaliana, EMBL:X84315
Length = 173
Score = 31.1 bits (67), Expect = 0.35
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -1
Query: 370 HHDTCYRRHPDRTYGYHHHGHAEF 299
HH Y H YGY +HGH +F
Sbjct: 122 HHHGHYGHHHGHGYGYGYHGHGKF 145
>At4g38770.1 68417.m05490 proline-rich family protein (PRP4) similar
to proline-rich protein [Arabidopsis thaliana]
gi|6782442|gb|AAF28388; contains proline-rich extensin
domains, INTERPRO:IPR002965
Length = 448
Score = 29.9 bits (64), Expect = 0.82
Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Frame = +2
Query: 89 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGPKPVP 268
P V VY + P+ + K P P V+ V + K + C K+ P PVP
Sbjct: 272 PPVPVYKPPPKIEHPPPVPVHKLPKKPCPPKKVDPPPVPVHKPPTKKPCPPKKVDPPPVP 331
Query: 269 NH-GVPDVLLP 298
H P +++P
Sbjct: 332 VHKPPPKIVIP 342
>At1g57750.1 68414.m06552 cytochrome P450, putative similar to
cytochrome P450 GI:4688670 from [Catharanthus roseus]
Length = 497
Score = 29.5 bits (63), Expect = 1.1
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = +2
Query: 92 LVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCV 238
LV +++ SE+++ PLPF K+P +PD++ H + NS+ C+
Sbjct: 351 LVYLHAALSESMR-LYPPLPFNHKSPAKPDVLPSGH-KVDANSKIVICI 397
>At3g24650.1 68416.m03095 abscisic acid-insensitive protein 3 (ABI3)
identical to abscisic acid-insensitive protein 3
GI:16146 SP:Q01593 from [Arabidopsis thaliana], (Plant
Cell 4 (10), 1251-1261 (1992))
Length = 720
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = -3
Query: 437 PLSEVDATVPAPAQGFVGANIRPPR-HMLPKAP*PDLWVPPPRTRGIRATARPVPHDS 267
P + A V P G++ A PP+ LP P W PPP++ + P+P S
Sbjct: 356 PPPQQQAFVSDPGFGYMPAPNYPPQPEFLPLLESPPSWPPPPQSGPMPHQQFPMPPTS 413
>At4g39480.1 68417.m05585 cytochrome P450 family protein contains
Pfam profile: PF00067 cytochrome P450
Length = 989
Score = 28.3 bits (60), Expect = 2.5
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 143 PLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCV 238
P+PF K+P +PD++ H + NSR +C+
Sbjct: 384 PVPFNHKSPAKPDVLPSGH-KVKANSRILFCL 414
Score = 27.5 bits (58), Expect = 4.4
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +2
Query: 143 PLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCV 238
P+PF K+P +PD++ H + NS+ +C+
Sbjct: 857 PVPFQHKSPTKPDVLPSGH-KVDANSKILFCL 887
>At3g22800.1 68416.m02874 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycsimilar to extensin-like protein [Lycopersicon
esculentum] gi|5917664|gb|AAD55979; contains
leucine-rich repeats, Pfam:PF00560; contains proline
rich extensin domains, INTERPRO:IPR002965
Length = 470
Score = 28.3 bits (60), Expect = 2.5
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = -3
Query: 371 PPRHMLPKAP*PDLWVPPPRTRGIRATARPVPHDSALVWDQPPC 240
PP ++ P P P ++ PPP + P P ++ PPC
Sbjct: 420 PPPYVYPPPPPPYVYPPPPSPPYVYPP--PPPSPQPYMYPSPPC 461
>At1g76010.1 68414.m08825 expressed protein
Length = 350
Score = 27.5 bits (58), Expect = 4.4
Identities = 17/43 (39%), Positives = 18/43 (41%)
Frame = +1
Query: 241 QGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG 369
QG + G GR R R RGGG R G G F N G
Sbjct: 303 QGRGGYDGPQGRGRGRGRGRGGRGRGGG--RGGDGGFNNRSDG 343
Score = 27.1 bits (57), Expect = 5.8
Identities = 14/45 (31%), Positives = 18/45 (40%)
Frame = +1
Query: 238 EQGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 372
E GGW + + G GR R R RG G + + GG
Sbjct: 178 EDGGWEREQSYGRGRGRGRGRSSRGRGRGGYNGPPNEYDAPQDGG 222
>At1g74290.1 68414.m08603 esterase/lipase/thioesterase family
protein contains Interpro entry IPR000379
esterase/lipase/thioesterase family
Length = 371
Score = 27.5 bits (58), Expect = 4.4
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +2
Query: 155 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGPKPVPNHGVPDV 289
VF + PDLV ++ V M R YC S + P P V D+
Sbjct: 100 VFATLLSPDLVEELGVYMVSFDRPGYCES-DPHPSRTPRSLVSDI 143
>At1g74280.1 68414.m08602 hydrolase, alpha/beta fold family protein
contains Pfam profile PF00561: hydrolase, alpha/beta
fold family
Length = 372
Score = 27.5 bits (58), Expect = 4.4
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +2
Query: 155 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGPKPVPNHGVPDV 289
VF + PDLV ++ V M R YC S + P P V D+
Sbjct: 100 VFATLLSPDLVEELGVYMVSFDRPGYCES-DPHPSRTPRSLVSDI 143
>At1g48410.2 68414.m05409 argonaute protein (AGO1) identical to
SP|O04379 Argonaute protein (AGO1) {Arabidopsis
thaliana}; contains Pfam profiles PF02171: Piwi domain,
PF02170: PAZ domain
Length = 1050
Score = 27.5 bits (58), Expect = 4.4
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +1
Query: 241 QGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 375
+G S+ + G GR R +GGG H+ G+G +GGR
Sbjct: 15 EGSGSREAGPVSGGGRGSQRGGFQQGGGQHQGGRGYTPQPQQGGR 59
>At1g48410.1 68414.m05408 argonaute protein (AGO1) identical to
SP|O04379 Argonaute protein (AGO1) {Arabidopsis
thaliana}; contains Pfam profiles PF02171: Piwi domain,
PF02170: PAZ domain
Length = 1048
Score = 27.5 bits (58), Expect = 4.4
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +1
Query: 241 QGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 375
+G S+ + G GR R +GGG H+ G+G +GGR
Sbjct: 15 EGSGSREAGPVSGGGRGSQRGGFQQGGGQHQGGRGYTPQPQQGGR 59
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 27.5 bits (58), Expect = 4.4
Identities = 15/54 (27%), Positives = 22/54 (40%)
Frame = -3
Query: 437 PLSEVDATVPAPAQGFVGANIRPPRHMLPKAP*PDLWVPPPRTRGIRATARPVP 276
P+++ P P +I PP P P PPP +R I + + P P
Sbjct: 567 PINKTPPPPPPPPPPLPSRSIPPPLAQPPPPRPPPPPPPPPSSRSIPSPSAPPP 620
>At5g26080.1 68418.m03103 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 141
Score = 27.1 bits (57), Expect = 5.8
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = +3
Query: 210 PRTRGSPTA*ARRLVPNQCRIMGYRTCCCPNSACPWWW 323
P T SP P + YR P S PWWW
Sbjct: 102 PPTPISPPPKVHHPAPQAQKAFYYRQSPPPPSGQPWWW 139
>At5g05340.1 68418.m00575 peroxidase, putative similar to peroxidase
[Nicotiana tabacum] gi|5381253|dbj|BAA82306; similar to
Peroxidase P7 [Brassica rapa (Turnip)] SWISS-PROT:P00434
Length = 324
Score = 27.1 bits (57), Expect = 5.8
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +1
Query: 67 NESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTSGPGQ*CSRF 204
N +I +PT S+ G S V + GAHT G + C+ F
Sbjct: 163 NSNIPAPTSSLSQLISSFSAVGLSTRDMVALSGAHTIGQSR-CTNF 207
>At4g08960.1 68417.m01476 phosphotyrosyl phosphatase activator
(PTPA) family protein similar to Protein phosphatase 2A,
regulatory subunit B' (PP2A, subunit B', PR53 isoform)
(Phosphotyrosyl phosphatase activator) (PTPA)
(Swiss-Prot:Q28717) [Oryctolagus cuniculus]
Length = 392
Score = 27.1 bits (57), Expect = 5.8
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3
Query: 353 PKAP*PDLWVPPPRTRGIRATARPVPHDSALV 258
P A P++ PPP R IRA A +PH+S +
Sbjct: 46 PLASFPEM-SPPPNYRPIRAPAINLPHNSQAI 76
>At2g35640.1 68415.m04371 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 340
Score = 27.1 bits (57), Expect = 5.8
Identities = 14/50 (28%), Positives = 22/50 (44%)
Frame = -3
Query: 395 GFVGANIRPPRHMLPKAP*PDLWVPPPRTRGIRATARPVPHDSALVWDQP 246
GFV + P H +P L PPP++ + + P P S+ +P
Sbjct: 174 GFVAPMMAQPMHQIPTTIVLSLPPPPPQSLSLSLPSPPQPPPSSSFHAEP 223
>At2g05520.1 68415.m00584 glycine-rich protein (GRP) identical to
glycine-rich protein; atGRP (GI:259447) [Arabidopsis
thaliana]
Length = 145
Score = 27.1 bits (57), Expect = 5.8
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 277 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 372
G GR R +GGG + G G+ G+ CR G
Sbjct: 88 GGGRYQGGGGRYQGGGGRQGGGGSGGSYCRHG 119
>At1g03050.1 68414.m00277 epsin N-terminal homology (ENTH)
domain-containing protein / clathrin assembly
protein-related contains Pfam PF01417: ENTH domain. ENTH
(Epsin N-terminal homology) domain; similar to CLATHRIN
COAT ASSEMBLY PROTEIN AP180 - Mus musculus,
SWISSPROT:Q61548
Length = 599
Score = 27.1 bits (57), Expect = 5.8
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -3
Query: 131 PAPSHSSLNTPTLKVGLPIDSFRYFSEAIPPKY 33
PAPS ++ N + +P+D F E PP Y
Sbjct: 519 PAPSTANGNAGNINSPVPMDPFAASLEVAPPAY 551
>At3g62330.1 68416.m07002 zinc knuckle (CCHC-type) family protein
contains Pfam domain, PF00098: Zinc knuckle
Length = 479
Score = 26.6 bits (56), Expect = 7.6
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = -1
Query: 391 SWGRTYVHHDTCYRRHPDRTY-GYHHHGHAEFGQQHVRY 278
S GR H D RH D Y G+ E+G+ + RY
Sbjct: 441 SKGRYPNHGDNYSSRHQDNNYGGFQRQRREEYGKAYNRY 479
>At3g28840.1 68416.m03598 expressed protein
Length = 391
Score = 26.6 bits (56), Expect = 7.6
Identities = 20/65 (30%), Positives = 24/65 (36%)
Frame = +1
Query: 244 GGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWAGAGTVAS 423
GG + T + G A G GT G A G G A + AGT A
Sbjct: 228 GGTTATGGTTAAGGSTAAGGTTASGAGTAGYGATAGGATASGAGTAAGGTTASDAGTAAG 287
Query: 424 TSDSG 438
T+ SG
Sbjct: 288 TTASG 292
>At3g12430.1 68416.m01548 expressed protein ; expression supported
by MPSS
Length = 238
Score = 26.6 bits (56), Expect = 7.6
Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = -3
Query: 146 GAWLHPAPSHSSLNTPTLKVGLPID--SFRYFSEAIPPKY 33
G W+H SH+ ++ L VG+ + Y+S + P +Y
Sbjct: 38 GQWIHDVLSHNRFSSHPLVVGVGVQWTPSSYYSASSPVRY 77
>At3g04640.1 68416.m00497 glycine-rich protein predicted proteins,
Arabidopsis thaliana
Length = 159
Score = 26.6 bits (56), Expect = 7.6
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +1
Query: 244 GGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFG 354
G S+ S G + IP + GGGTHRSG + G
Sbjct: 103 GSSSRGGGGSSSRGGGLRPIP-IYGGGTHRSGHHSSG 138
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,027,254
Number of Sequences: 28952
Number of extensions: 234197
Number of successful extensions: 887
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 876
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 722638680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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