Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0358
(514 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677 144 4e-35
At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to GI:92... 144 4e-35
At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to GI:92... 144 4e-35
At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3) senescence... 144 4e-35
At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3) senescence... 144 4e-35
At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3) senescence... 144 4e-35
At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3) senescence... 144 4e-35
At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3) senescence... 144 4e-35
At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to GI:3... 144 4e-35
At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to GI:1... 144 4e-35
At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to GI:1... 144 4e-35
At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to GI:1... 144 4e-35
At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / ... 142 9e-35
At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / ... 142 9e-35
At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / ... 142 9e-35
At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / ... 142 9e-35
At2g35635.1 68415.m04370 ubiquitin family protein contains INTER... 142 9e-35
At1g65350.1 68414.m07413 polyubiquitin, putative similar to poly... 142 9e-35
At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to poly... 142 9e-35
At1g31340.1 68414.m03835 ubiquitin family protein contains INTER... 142 9e-35
At1g23410.1 68414.m02932 ubiquitin extension protein, putative /... 142 9e-35
At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to polyu... 141 3e-34
At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to polyu... 133 6e-32
At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam ... 113 9e-26
At1g11980.1 68414.m01384 ubiquitin family protein similar to Cha... 88 3e-18
At1g53950.1 68414.m06145 ubiquitin family protein contains INTER... 68 3e-12
At5g42220.1 68418.m05139 ubiquitin family protein contains INTER... 67 6e-12
At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative simi... 62 2e-10
At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase fa... 60 1e-09
At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase fa... 60 1e-09
At5g38470.1 68418.m04650 DNA repair protein RAD23, putative simi... 53 1e-07
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER... 51 4e-07
At2g17200.1 68415.m01986 ubiquitin family protein weak similarit... 51 4e-07
At4g02970.1 68417.m00404 ubiquitin family protein contains INTER... 51 5e-07
At2g17190.1 68415.m01985 ubiquitin family protein contains INTER... 51 5e-07
At3g13235.1 68416.m01666 ubiquitin family protein contains INTER... 50 1e-06
At1g64470.1 68414.m07309 ubiquitin family protein contains INTER... 48 3e-06
At4g03350.1 68417.m00457 ubiquitin family protein contains INTER... 48 4e-06
At4g01000.1 68417.m00135 ubiquitin family protein low similarity... 48 4e-06
At4g03370.1 68417.m00459 ubiquitin family protein contains INTER... 48 5e-06
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 48 5e-06
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 48 5e-06
At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase fa... 46 1e-05
At1g79650.3 68414.m09289 DNA repair protein RAD23, putative simi... 46 1e-05
At1g79650.2 68414.m09288 DNA repair protein RAD23, putative simi... 46 1e-05
At1g79650.1 68414.m09287 DNA repair protein RAD23, putative simi... 46 1e-05
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1... 46 1e-05
At1g16190.1 68414.m01939 DNA repair protein RAD23, putative simi... 46 1e-05
At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding ... 46 2e-05
At4g05230.1 68417.m00789 ubiquitin family protein contains INTER... 44 5e-05
At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquiti... 44 8e-05
At3g06455.1 68416.m00747 splicing factor-related contains weak s... 42 2e-04
At4g03360.1 68417.m00458 ubiquitin family protein contains INTER... 41 6e-04
At4g02950.1 68417.m00402 ubiquitin family protein contains INTER... 41 6e-04
At2g30100.1 68415.m03663 ubiquitin family protein low similarity... 40 7e-04
At1g53980.1 68414.m06149 polyubiquitin-related contains similari... 40 0.001
At4g05250.1 68417.m00793 ubiquitin family protein contains INTER... 40 0.001
At4g05270.1 68417.m00797 ubiquitin family protein contains INTER... 38 0.005
At4g05310.1 68417.m00809 ubiquitin family protein contains INTER... 37 0.007
At5g14360.1 68418.m01678 ubiquitin family protein contains INTER... 37 0.009
At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase fa... 35 0.028
At5g40630.1 68418.m04932 ubiquitin family protein contains INTER... 35 0.037
At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N domain-... 33 0.11
At4g27180.1 68417.m03904 kinesin-like protein B (KATB) 29 1.8
At1g47680.1 68414.m05297 hypothetical protein 29 2.4
At4g05240.1 68417.m00791 ubiquitin family protein contains INTER... 28 3.2
At2g19180.1 68415.m02238 expressed protein 28 4.2
At1g22050.1 68414.m02758 ubiquitin family protein contains INTER... 28 4.2
At3g46530.1 68416.m05051 disease resistance protein, RPP13-like ... 27 5.6
At3g45755.1 68416.m04945 hypothetical protein 27 5.6
At3g14530.1 68416.m01841 geranylgeranyl pyrophosphate synthase, ... 27 5.6
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 27 7.4
At5g26190.1 68418.m03116 DC1 domain-containing protein contains ... 27 7.4
At3g47160.1 68416.m05120 expressed protein similar to MTD2 [Medi... 27 7.4
At4g16070.1 68417.m02437 lipase class 3 family protein low simil... 27 9.8
>At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677
Length = 382
Score = 144 bits (348), Expect = 4e-35
Identities = 72/87 (82%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 63 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 122
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTL+DYNIQKESTLHLVL L
Sbjct: 123 GKQLEDGRTLADYNIQKESTLHLVLRL 149
Score = 144 bits (348), Expect = 4e-35
Identities = 72/87 (82%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 198
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTL+DYNIQKESTLHLVL L
Sbjct: 199 GKQLEDGRTLADYNIQKESTLHLVLRL 225
Score = 144 bits (348), Expect = 4e-35
Identities = 72/87 (82%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 215 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 274
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTL+DYNIQKESTLHLVL L
Sbjct: 275 GKQLEDGRTLADYNIQKESTLHLVLRL 301
Score = 144 bits (348), Expect = 4e-35
Identities = 72/87 (82%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 291 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 350
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTL+DYNIQKESTLHLVL L
Sbjct: 351 GKQLEDGRTLADYNIQKESTLHLVLRL 377
Score = 142 bits (345), Expect = 9e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 222
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 223 IQKESTLHLVLDL 261
IQKESTLHLVL L
Sbjct: 61 IQKESTLHLVLRL 73
>At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 144 bits (348), Expect = 4e-35
Identities = 72/87 (82%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 63 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 122
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTL+DYNIQKESTLHLVL L
Sbjct: 123 GKQLEDGRTLADYNIQKESTLHLVLRL 149
Score = 144 bits (348), Expect = 4e-35
Identities = 72/87 (82%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 198
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTL+DYNIQKESTLHLVL L
Sbjct: 199 GKQLEDGRTLADYNIQKESTLHLVLRL 225
Score = 144 bits (348), Expect = 4e-35
Identities = 72/87 (82%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 215 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 274
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTL+DYNIQKESTLHLVL L
Sbjct: 275 GKQLEDGRTLADYNIQKESTLHLVLRL 301
Score = 142 bits (345), Expect = 9e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 222
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 223 IQKESTLHLVLDL 261
IQKESTLHLVL L
Sbjct: 61 IQKESTLHLVLRL 73
>At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 144 bits (348), Expect = 4e-35
Identities = 72/87 (82%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 63 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 122
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTL+DYNIQKESTLHLVL L
Sbjct: 123 GKQLEDGRTLADYNIQKESTLHLVLRL 149
Score = 144 bits (348), Expect = 4e-35
Identities = 72/87 (82%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 198
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTL+DYNIQKESTLHLVL L
Sbjct: 199 GKQLEDGRTLADYNIQKESTLHLVLRL 225
Score = 144 bits (348), Expect = 4e-35
Identities = 72/87 (82%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 215 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 274
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTL+DYNIQKESTLHLVL L
Sbjct: 275 GKQLEDGRTLADYNIQKESTLHLVLRL 301
Score = 142 bits (345), Expect = 9e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 222
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 223 IQKESTLHLVLDL 261
IQKESTLHLVL L
Sbjct: 61 IQKESTLHLVLRL 73
>At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 312
Score = 144 bits (348), Expect = 4e-35
Identities = 72/87 (82%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 63 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 122
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTL+DYNIQKESTLHLVL L
Sbjct: 123 GKQLEDGRTLADYNIQKESTLHLVLRL 149
Score = 144 bits (348), Expect = 4e-35
Identities = 72/87 (82%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 198
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTL+DYNIQKESTLHLVL L
Sbjct: 199 GKQLEDGRTLADYNIQKESTLHLVLRL 225
Score = 142 bits (345), Expect = 9e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 222
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 223 IQKESTLHLVLDL 261
IQKESTLHLVL L
Sbjct: 61 IQKESTLHLVLRL 73
Score = 68.5 bits (160), Expect = 2e-12
Identities = 35/48 (72%), Positives = 40/48 (83%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 144
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 215 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 262
Score = 32.7 bits (71), Expect = 0.15
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +2
Query: 146 VFLQTNNVSSLPGNN*KMAALFQTITSRKNPHFTW 250
VFL+T++VSS ++ +M L+ T TSR++ FTW
Sbjct: 263 VFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTW 297
>At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 144 bits (348), Expect = 4e-35
Identities = 72/87 (82%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 63 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 122
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTL+DYNIQKESTLHLVL L
Sbjct: 123 GKQLEDGRTLADYNIQKESTLHLVLRL 149
Score = 144 bits (348), Expect = 4e-35
Identities = 72/87 (82%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 198
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTL+DYNIQKESTLHLVL L
Sbjct: 199 GKQLEDGRTLADYNIQKESTLHLVLRL 225
Score = 144 bits (348), Expect = 4e-35
Identities = 72/87 (82%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 215 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 274
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTL+DYNIQKESTLHLVL L
Sbjct: 275 GKQLEDGRTLADYNIQKESTLHLVLRL 301
Score = 144 bits (348), Expect = 4e-35
Identities = 72/87 (82%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 291 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 350
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTL+DYNIQKESTLHLVL L
Sbjct: 351 GKQLEDGRTLADYNIQKESTLHLVLRL 377
Score = 142 bits (345), Expect = 9e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 222
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 223 IQKESTLHLVLDL 261
IQKESTLHLVL L
Sbjct: 61 IQKESTLHLVLRL 73
Score = 68.5 bits (160), Expect = 2e-12
Identities = 35/48 (72%), Positives = 40/48 (83%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 144
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 367 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
Score = 32.7 bits (71), Expect = 0.15
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +2
Query: 146 VFLQTNNVSSLPGNN*KMAALFQTITSRKNPHFTW 250
VFL+T++VSS ++ +M L+ T TSR++ FTW
Sbjct: 415 VFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTW 449
>At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 144 bits (348), Expect = 4e-35
Identities = 72/87 (82%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 63 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 122
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTL+DYNIQKESTLHLVL L
Sbjct: 123 GKQLEDGRTLADYNIQKESTLHLVLRL 149
Score = 144 bits (348), Expect = 4e-35
Identities = 72/87 (82%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 198
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTL+DYNIQKESTLHLVL L
Sbjct: 199 GKQLEDGRTLADYNIQKESTLHLVLRL 225
Score = 144 bits (348), Expect = 4e-35
Identities = 72/87 (82%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 215 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 274
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTL+DYNIQKESTLHLVL L
Sbjct: 275 GKQLEDGRTLADYNIQKESTLHLVLRL 301
Score = 142 bits (345), Expect = 9e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 222
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 223 IQKESTLHLVLDL 261
IQKESTLHLVL L
Sbjct: 61 IQKESTLHLVLRL 73
Score = 68.5 bits (160), Expect = 2e-12
Identities = 35/48 (72%), Positives = 40/48 (83%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 144
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 291 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
Score = 32.7 bits (71), Expect = 0.15
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +2
Query: 146 VFLQTNNVSSLPGNN*KMAALFQTITSRKNPHFTW 250
VFL+T++VSS ++ +M L+ T TSR++ FTW
Sbjct: 339 VFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTW 373
>At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 144 bits (348), Expect = 4e-35
Identities = 72/87 (82%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 63 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 122
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTL+DYNIQKESTLHLVL L
Sbjct: 123 GKQLEDGRTLADYNIQKESTLHLVLRL 149
Score = 144 bits (348), Expect = 4e-35
Identities = 72/87 (82%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 198
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTL+DYNIQKESTLHLVL L
Sbjct: 199 GKQLEDGRTLADYNIQKESTLHLVLRL 225
Score = 144 bits (348), Expect = 4e-35
Identities = 72/87 (82%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 215 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 274
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTL+DYNIQKESTLHLVL L
Sbjct: 275 GKQLEDGRTLADYNIQKESTLHLVLRL 301
Score = 144 bits (348), Expect = 4e-35
Identities = 72/87 (82%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 291 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 350
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTL+DYNIQKESTLHLVL L
Sbjct: 351 GKQLEDGRTLADYNIQKESTLHLVLRL 377
Score = 142 bits (345), Expect = 9e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 222
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 223 IQKESTLHLVLDL 261
IQKESTLHLVL L
Sbjct: 61 IQKESTLHLVLRL 73
Score = 68.5 bits (160), Expect = 2e-12
Identities = 35/48 (72%), Positives = 40/48 (83%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 144
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 367 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
Score = 32.7 bits (71), Expect = 0.15
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +2
Query: 146 VFLQTNNVSSLPGNN*KMAALFQTITSRKNPHFTW 250
VFL+T++VSS ++ +M L+ T TSR++ FTW
Sbjct: 415 VFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTW 449
>At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 144 bits (348), Expect = 4e-35
Identities = 72/87 (82%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 63 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 122
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTL+DYNIQKESTLHLVL L
Sbjct: 123 GKQLEDGRTLADYNIQKESTLHLVLRL 149
Score = 144 bits (348), Expect = 4e-35
Identities = 72/87 (82%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 198
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTL+DYNIQKESTLHLVL L
Sbjct: 199 GKQLEDGRTLADYNIQKESTLHLVLRL 225
Score = 144 bits (348), Expect = 4e-35
Identities = 72/87 (82%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 215 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 274
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTL+DYNIQKESTLHLVL L
Sbjct: 275 GKQLEDGRTLADYNIQKESTLHLVLRL 301
Score = 142 bits (345), Expect = 9e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 222
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 223 IQKESTLHLVLDL 261
IQKESTLHLVL L
Sbjct: 61 IQKESTLHLVLRL 73
Score = 68.5 bits (160), Expect = 2e-12
Identities = 35/48 (72%), Positives = 40/48 (83%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 144
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 291 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
Score = 32.7 bits (71), Expect = 0.15
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +2
Query: 146 VFLQTNNVSSLPGNN*KMAALFQTITSRKNPHFTW 250
VFL+T++VSS ++ +M L+ T TSR++ FTW
Sbjct: 339 VFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTW 373
>At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to
GI:304117
Length = 229
Score = 144 bits (348), Expect = 4e-35
Identities = 72/87 (82%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 63 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 122
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTL+DYNIQKESTLHLVL L
Sbjct: 123 GKQLEDGRTLADYNIQKESTLHLVLRL 149
Score = 144 bits (348), Expect = 4e-35
Identities = 72/87 (82%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 198
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTL+DYNIQKESTLHLVL L
Sbjct: 199 GKQLEDGRTLADYNIQKESTLHLVLRL 225
Score = 142 bits (345), Expect = 9e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 222
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 223 IQKESTLHLVLDL 261
IQKESTLHLVL L
Sbjct: 61 IQKESTLHLVLRL 73
>At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 144 bits (348), Expect = 4e-35
Identities = 72/87 (82%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 63 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 122
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTL+DYNIQKESTLHLVL L
Sbjct: 123 GKQLEDGRTLADYNIQKESTLHLVLRL 149
Score = 144 bits (348), Expect = 4e-35
Identities = 72/87 (82%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 198
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTL+DYNIQKESTLHLVL L
Sbjct: 199 GKQLEDGRTLADYNIQKESTLHLVLRL 225
Score = 144 bits (348), Expect = 4e-35
Identities = 72/87 (82%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 215 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 274
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTL+DYNIQKESTLHLVL L
Sbjct: 275 GKQLEDGRTLADYNIQKESTLHLVLRL 301
Score = 142 bits (345), Expect = 9e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 222
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 223 IQKESTLHLVLDL 261
IQKESTLHLVL L
Sbjct: 61 IQKESTLHLVLRL 73
>At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 229
Score = 144 bits (348), Expect = 4e-35
Identities = 72/87 (82%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 63 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 122
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTL+DYNIQKESTLHLVL L
Sbjct: 123 GKQLEDGRTLADYNIQKESTLHLVLRL 149
Score = 144 bits (348), Expect = 4e-35
Identities = 72/87 (82%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 198
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTL+DYNIQKESTLHLVL L
Sbjct: 199 GKQLEDGRTLADYNIQKESTLHLVLRL 225
Score = 142 bits (345), Expect = 9e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 222
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 223 IQKESTLHLVLDL 261
IQKESTLHLVL L
Sbjct: 61 IQKESTLHLVLRL 73
>At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 144 bits (348), Expect = 4e-35
Identities = 72/87 (82%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 63 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 122
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTL+DYNIQKESTLHLVL L
Sbjct: 123 GKQLEDGRTLADYNIQKESTLHLVLRL 149
Score = 144 bits (348), Expect = 4e-35
Identities = 72/87 (82%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 198
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTL+DYNIQKESTLHLVL L
Sbjct: 199 GKQLEDGRTLADYNIQKESTLHLVLRL 225
Score = 144 bits (348), Expect = 4e-35
Identities = 72/87 (82%), Positives = 78/87 (89%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 215 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 274
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTL+DYNIQKESTLHLVL L
Sbjct: 275 GKQLEDGRTLADYNIQKESTLHLVLRL 301
Score = 142 bits (345), Expect = 9e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 222
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 223 IQKESTLHLVLDL 261
IQKESTLHLVL L
Sbjct: 61 IQKESTLHLVLRL 73
>At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / 40S
ribosomal protein S27A (RPS27aC) identical to GI:166933,
GI:166934
Length = 157
Score = 142 bits (345), Expect = 9e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 222
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 223 IQKESTLHLVLDL 261
IQKESTLHLVL L
Sbjct: 61 IQKESTLHLVLRL 73
>At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / 60S
ribosomal protein L40 (RPL40B) identical to GI:166929,
GI:166930
Length = 128
Score = 142 bits (345), Expect = 9e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 222
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 223 IQKESTLHLVLDL 261
IQKESTLHLVL L
Sbjct: 61 IQKESTLHLVLRL 73
Score = 98.3 bits (234), Expect = 3e-21
Identities = 42/52 (80%), Positives = 45/52 (86%)
Frame = +3
Query: 255 RLRGGTIEPSLRILAMKYNCEKMICRKCYARLHPRATNCRKTKCGHTNNLRP 410
RLRGG IEPSL +LA KYN +KMICRKCYARLHPRA NCRK KCGH+N LRP
Sbjct: 72 RLRGGIIEPSLMMLARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRP 123
>At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / 40S
ribosomal protein S27A (RPS27aB) identical to GI:166936
Length = 157
Score = 142 bits (345), Expect = 9e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 222
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 223 IQKESTLHLVLDL 261
IQKESTLHLVL L
Sbjct: 61 IQKESTLHLVLRL 73
>At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / 60S
ribosomal protein L40 (RPL40A) identical to GI:166930,
GI:166931
Length = 128
Score = 142 bits (345), Expect = 9e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 222
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 223 IQKESTLHLVLDL 261
IQKESTLHLVL L
Sbjct: 61 IQKESTLHLVLRL 73
Score = 98.3 bits (234), Expect = 3e-21
Identities = 42/52 (80%), Positives = 45/52 (86%)
Frame = +3
Query: 255 RLRGGTIEPSLRILAMKYNCEKMICRKCYARLHPRATNCRKTKCGHTNNLRP 410
RLRGG IEPSL +LA KYN +KMICRKCYARLHPRA NCRK KCGH+N LRP
Sbjct: 72 RLRGGIIEPSLMMLARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRP 123
>At2g35635.1 68415.m04370 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 154
Score = 142 bits (345), Expect = 9e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 222
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 223 IQKESTLHLVLDL 261
IQKESTLHLVL L
Sbjct: 61 IQKESTLHLVLRL 73
Score = 91.9 bits (218), Expect = 2e-19
Identities = 45/87 (51%), Positives = 61/87 (70%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ I VKTLTGK I +++E +DTI+ +K ++++KEGIPP QQRLI+A
Sbjct: 63 KESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYA 122
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQL D +T DY I+ S LHLVL L
Sbjct: 123 GKQLADDKTAKDYAIEGGSVLHLVLAL 149
>At1g65350.1 68414.m07413 polyubiquitin, putative similar to
polyubiquitin GI:248337 from [Zea mays]
Length = 294
Score = 142 bits (345), Expect = 9e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 222
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 223 IQKESTLHLVLDL 261
IQKESTLHLVL L
Sbjct: 61 IQKESTLHLVLRL 73
Score = 140 bits (340), Expect = 4e-34
Identities = 71/87 (81%), Positives = 77/87 (88%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE IPPDQQRLIFA
Sbjct: 138 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFA 197
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTL+DYNIQKESTLHLVL L
Sbjct: 198 GKQLEDGRTLADYNIQKESTLHLVLRL 224
Score = 136 bits (330), Expect = 6e-33
Identities = 71/87 (81%), Positives = 77/87 (88%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 63 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 122
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTL+D NIQKESTLHLVL L
Sbjct: 123 GKQLEDGRTLAD-NIQKESTLHLVLRL 148
Score = 103 bits (246), Expect = 9e-23
Identities = 52/67 (77%), Positives = 57/67 (85%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVE+S TI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 214 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFA 273
Query: 181 GKQLEDG 201
GKQLE G
Sbjct: 274 GKQLEGG 280
>At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to
polyubiquitin (ubq12) gene sequence GI:304121 from
[Arabidopsis thaliana]
Length = 230
Score = 142 bits (345), Expect = 9e-35
Identities = 69/77 (89%), Positives = 73/77 (94%)
Frame = +1
Query: 31 FSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 210
F MQIFVKTLTGKTITLEVE+SDTI+N+KAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 73 FRGGMQIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 132
Query: 211 SDYNIQKESTLHLVLDL 261
+DYNIQKESTLHLVL L
Sbjct: 133 ADYNIQKESTLHLVLRL 149
Score = 138 bits (333), Expect = 3e-33
Identities = 70/87 (80%), Positives = 76/87 (87%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGI PDQQRLIFA
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGISPDQQRLIFA 198
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQ EDGRTL+DYNIQKESTLHLVL L
Sbjct: 199 GKQHEDGRTLADYNIQKESTLHLVLRL 225
Score = 126 bits (304), Expect = 9e-30
Identities = 59/71 (83%), Positives = 67/71 (94%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 222
MQIF+KTLTGKT LEVE+SDTI+NVKAKIQD EGIPPDQ RLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFLKTLTGKTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYN 60
Query: 223 IQKESTLHLVL 255
+Q++STLHL+L
Sbjct: 61 VQEDSTLHLLL 71
>At1g31340.1 68414.m03835 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 156
Score = 142 bits (345), Expect = 9e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 222
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 223 IQKESTLHLVLDL 261
IQKESTLHLVL L
Sbjct: 61 IQKESTLHLVLRL 73
Score = 95.1 bits (226), Expect = 2e-20
Identities = 46/87 (52%), Positives = 62/87 (71%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ I VKTLTGK I +++E +DTI+ +K ++++KEGIPP QQRLI+A
Sbjct: 63 KESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYA 122
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQL D +T DYNI+ S LHLVL L
Sbjct: 123 GKQLADDKTAKDYNIEGGSVLHLVLAL 149
>At1g23410.1 68414.m02932 ubiquitin extension protein, putative /
40S ribosomal protein S27A (RPS27aA) strong similarity
to ubiquitin extension protein (UBQ5) GB:AAA32906
GI:166934 from (Arabidopsis thaliana)
Length = 156
Score = 142 bits (345), Expect = 9e-35
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 222
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 223 IQKESTLHLVLDL 261
IQKESTLHLVL L
Sbjct: 61 IQKESTLHLVLRL 73
>At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to
polyubiquitin (ubq9) gene sequence GI:304120 from
[Arabidopsis thaliana]
Length = 322
Score = 141 bits (341), Expect = 3e-34
Identities = 67/73 (91%), Positives = 72/73 (98%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 222
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEG+PPDQQRLIFAGKQL+DGRTL+DYN
Sbjct: 79 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYN 138
Query: 223 IQKESTLHLVLDL 261
IQKESTLHLVL L
Sbjct: 139 IQKESTLHLVLRL 151
Score = 135 bits (327), Expect = 1e-32
Identities = 68/87 (78%), Positives = 75/87 (86%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFV+TLT KTI LEVE+SDT +NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 141 KESTLHLVLRLRGGMQIFVRTLTRKTIALEVESSDTTDNVKAKIQDKEGIPPDQQRLIFA 200
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTL+DYNIQKESTLHLVL L
Sbjct: 201 GKQLEDGRTLADYNIQKESTLHLVLRL 227
Score = 126 bits (305), Expect = 7e-30
Identities = 67/88 (76%), Positives = 74/88 (84%), Gaps = 1/88 (1%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKE I PDQQRLIFA
Sbjct: 217 KESTLHLVLRLCGGMQIFVNTLTGKTITLEVESSDTIDNVKAKIQDKERIQPDQQRLIFA 276
Query: 181 GKQLEDG-RTLSDYNIQKESTLHLVLDL 261
G+QLEDG TL+DYNIQKESTLHLVL L
Sbjct: 277 GEQLEDGYYTLADYNIQKESTLHLVLRL 304
Score = 110 bits (264), Expect = 6e-25
Identities = 54/74 (72%), Positives = 63/74 (85%)
Frame = +1
Query: 40 TMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 219
+MQI KTLT KTIT++V +SDTI NVKAKIQD EGIP DQQRLIF+GK L+DGRTL+DY
Sbjct: 2 SMQIHAKTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADY 61
Query: 220 NIQKESTLHLVLDL 261
+IQK+S LHL L L
Sbjct: 62 SIQKDSILHLALRL 75
>At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to
polyubiquitin (ubq8) GI:870793, GB:L05917 [Arabidopsis
thaliana] (Genetics 139 (2), 921-939 (1995))
Length = 631
Score = 133 bits (322), Expect = 6e-32
Identities = 68/87 (78%), Positives = 76/87 (87%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 180
K+S + V+ MQIFV+TLTGKTITLEV++SDTI+NVKAKIQDKEGI P QQRLIFA
Sbjct: 65 KESTLHLVLRLRGGMQIFVQTLTGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQRLIFA 124
Query: 181 GKQLEDGRTLSDYNIQKESTLHLVLDL 261
GKQLEDGRTL+DYNIQKESTLHLVL L
Sbjct: 125 GKQLEDGRTLADYNIQKESTLHLVLRL 151
Score = 124 bits (299), Expect = 4e-29
Identities = 61/74 (82%), Positives = 67/74 (90%)
Frame = +1
Query: 40 TMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 219
T+QI+ KTLT KTITL+VE SD+I NVKAKIQ+KEGIP DQQRLIFAGKQLEDG TL+DY
Sbjct: 2 TIQIYAKTLTEKTITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADY 61
Query: 220 NIQKESTLHLVLDL 261
NIQKESTLHLVL L
Sbjct: 62 NIQKESTLHLVLRL 75
Score = 112 bits (270), Expect = 1e-25
Identities = 56/75 (74%), Positives = 63/75 (84%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 222
MQIF+KTLTGKTI LEVE+SDTI NVK KIQ KEGI PDQQ LIF G+QLEDG TL DY+
Sbjct: 552 MQIFIKTLTGKTIILEVESSDTIANVKEKIQVKEGIKPDQQMLIFFGQQLEDGVTLGDYD 611
Query: 223 IQKESTLHLVLDLEE 267
I K+STL+LVL L +
Sbjct: 612 IHKKSTLYLVLRLRQ 626
Score = 109 bits (262), Expect = 1e-24
Identities = 59/90 (65%), Positives = 69/90 (76%), Gaps = 2/90 (2%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGI--PPDQQRLI 174
K S + V F MQIFVKTLT K I LEVE+ DTIENVKA +QDKEGI P+ QRLI
Sbjct: 305 KGSTLYLVTRFRCGMQIFVKTLTRKRINLEVESWDTIENVKAMVQDKEGIQPQPNLQRLI 364
Query: 175 FAGKQLEDGRTLSDYNIQKESTLHLVLDLE 264
F GK+L+DG TL+DY+IQKESTLHLVL ++
Sbjct: 365 FLGKELKDGCTLADYSIQKESTLHLVLGMQ 394
Score = 104 bits (250), Expect = 3e-23
Identities = 51/69 (73%), Positives = 57/69 (82%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 222
MQIFVK GK ITLEV +SDTI++VKAKIQDK G PPDQQ L+F G QL+DGRTL DYN
Sbjct: 393 MQIFVKLFGGKIITLEVLSSDTIKSVKAKIQDKVGSPPDQQILLFRGGQLQDGRTLGDYN 452
Query: 223 IQKESTLHL 249
I+ ESTLHL
Sbjct: 453 IRNESTLHL 461
Score = 95.5 bits (227), Expect = 2e-20
Identities = 54/94 (57%), Positives = 67/94 (71%), Gaps = 7/94 (7%)
Frame = +1
Query: 1 KKS*ILRVVYFSNTMQIFVKTLTGK-----TITLEVEASDTIENVKAKIQDKEGIPPDQQ 165
K+S + V+ MQIFV T +GK T+TL+VE+SDTIENVKAKIQD+EG+ PD Q
Sbjct: 141 KESTLHLVLRLCGGMQIFVSTFSGKNFTSDTLTLKVESSDTIENVKAKIQDREGLRPDHQ 200
Query: 166 RLIFAGKQL--EDGRTLSDYNIQKESTLHLVLDL 261
RLIF G++L ED RTL+DY I+ STL L L L
Sbjct: 201 RLIFHGEELFTEDNRTLADYGIRNRSTLCLALRL 234
Score = 95.1 bits (226), Expect = 2e-20
Identities = 51/75 (68%), Positives = 57/75 (76%), Gaps = 5/75 (6%)
Frame = +1
Query: 43 MQIFVKTL-----TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207
M IFVK L TG+ LEVE+SDTI+NVKAK+QDKE IP D RLIFAGK LE GRT
Sbjct: 238 MYIFVKNLPYNSFTGENFILEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKPLEGGRT 297
Query: 208 LSDYNIQKESTLHLV 252
L+ YNIQK STL+LV
Sbjct: 298 LAHYNIQKGSTLYLV 312
Score = 91.5 bits (217), Expect = 3e-19
Identities = 50/75 (66%), Positives = 55/75 (73%), Gaps = 7/75 (9%)
Frame = +1
Query: 43 MQIFVKTL-------TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 201
MQIFVKT T KTITLEVE+SDTI+NVK KIQ K GIP D+QRLIF G+ L
Sbjct: 469 MQIFVKTFSFSGETPTCKTITLEVESSDTIDNVKVKIQHKVGIPLDRQRLIFGGRVLVGS 528
Query: 202 RTLSDYNIQKESTLH 246
RTL DYNIQK ST+H
Sbjct: 529 RTLLDYNIQKGSTIH 543
>At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam
profile: PF00240 ubiquitin family
Length = 158
Score = 113 bits (271), Expect = 9e-26
Identities = 53/70 (75%), Positives = 60/70 (85%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 222
M IF+KTLTG+ I LEVE DTIEN+KAKIQDK+GIP DQQRLIF GKQLEDG TL+DYN
Sbjct: 86 MFIFIKTLTGRRIVLEVENCDTIENIKAKIQDKQGIPVDQQRLIFKGKQLEDGLTLADYN 145
Query: 223 IQKESTLHLV 252
IQ +S LHL+
Sbjct: 146 IQNDSILHLI 155
>At1g11980.1 68414.m01384 ubiquitin family protein similar to Chain
A, Structure Of Ubiquitin-Like Protein, Rub1 GI:6729726
from [Arabidopsis thaliana]
Length = 78
Score = 88.2 bits (209), Expect = 3e-18
Identities = 40/73 (54%), Positives = 54/73 (73%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 222
M+I VKTLT K I +E+E +DTIE +K +I++KEGIPP QR+++ GKQL D T YN
Sbjct: 1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYN 60
Query: 223 IQKESTLHLVLDL 261
+++ S LHLVL L
Sbjct: 61 LERGSVLHLVLAL 73
>At1g53950.1 68414.m06145 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 216
Score = 68.1 bits (159), Expect = 3e-12
Identities = 31/48 (64%), Positives = 39/48 (81%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 186
M IF+KTLTG+T T EV+ SDTI +KAK ++KEGIP +QQRLIF G+
Sbjct: 50 MMIFIKTLTGRTNTYEVKGSDTIRELKAKHEEKEGIPVEQQRLIFQGR 97
Score = 66.5 bits (155), Expect = 1e-11
Identities = 32/67 (47%), Positives = 46/67 (68%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 222
M+IFV T+ KT LEV+ SDTI+ +K+ I D+ G P DQQ L G +L++ T+SDYN
Sbjct: 141 MRIFVSTIKEKTFILEVKGSDTIKKLKSMIHDQGGPPVDQQDLNHLGTKLKNNATISDYN 200
Query: 223 IQKESTL 243
I+ ++ L
Sbjct: 201 IKPDANL 207
Score = 28.3 bits (60), Expect = 3.2
Identities = 15/25 (60%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVE-ASDTIE 114
M I +KTL GK I LEVE +S+TI+
Sbjct: 1 MHISIKTLEGKRIKLEVEDSSNTID 25
Score = 27.5 bits (58), Expect = 5.6
Identities = 13/24 (54%), Positives = 20/24 (83%), Gaps = 1/24 (4%)
Frame = +1
Query: 46 QIFVKTLTGKTITLEV-EASDTIE 114
+I +KT+ GK+I LEV ++SDTI+
Sbjct: 97 RISIKTVKGKSINLEVADSSDTID 120
>At5g42220.1 68418.m05139 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 879
Score = 67.3 bits (157), Expect = 6e-12
Identities = 29/73 (39%), Positives = 49/73 (67%)
Frame = +1
Query: 37 NTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 216
+T+++ +KTL +T T +V ++T+ K KI + G+P QQRLIF G+ L+D LS+
Sbjct: 22 STLELNIKTLDSRTYTFQVNKNETVLLFKEKIASETGVPVGQQRLIFRGRVLKDDHPLSE 81
Query: 217 YNIQKESTLHLVL 255
Y+++ TLHL++
Sbjct: 82 YHLENGHTLHLIV 94
>At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative similar
to SP|P39940 Ubiquitin--protein ligase RSP5 (EC 6.3.2.-)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00240: Ubiquitin family, PF00632: HECT-domain
(ubiquitin-transferase)
Length = 873
Score = 62.5 bits (145), Expect = 2e-10
Identities = 30/81 (37%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
Frame = +1
Query: 34 SNTMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 210
S +QIFV+ ++G KTI + E DT+E + +I+ K IP +QR+I+ GKQL+ +L
Sbjct: 92 STRLQIFVRMMSGGKTIVIHAEKYDTVEKLHQRIEWKTKIPALEQRVIYKGKQLQRENSL 151
Query: 211 SDYNIQKESTLHLVLDLEEVQ 273
+ Y+I+++++L LV ++ +
Sbjct: 152 TYYSIEQDASLQLVARMQSTE 172
>At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 59.7 bits (138), Expect = 1e-09
Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = +1
Query: 28 YFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGR 204
Y +T+ I++ TL G I + V SD+IE+VK +IQ G Q+L+F G++L
Sbjct: 30 YPDDTIMIYL-TLPGSVIPMRVLESDSIESVKLRIQSYRGFVVRNQKLVFGGRELARSNS 88
Query: 205 TLSDYNIQKESTLHLVLDLEEVQL 276
+ DY + + + LHLVL L ++Q+
Sbjct: 89 NMRDYGVSEGNILHLVLKLSDLQV 112
Score = 49.6 bits (113), Expect = 1e-06
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Frame = +1
Query: 13 ILRVVYFSNTMQIF-VKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAG 183
IL +V + +Q+ VKT GK VE I VK +I K G + PD+Q +++ G
Sbjct: 100 ILHLVLKLSDLQVLDVKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEG 159
Query: 184 KQLEDGRTLSDYNIQKESTLHLVL 255
++LED ++D +S LHL++
Sbjct: 160 EKLEDQSLINDICRNDDSVLHLLV 183
>At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 59.7 bits (138), Expect = 1e-09
Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = +1
Query: 28 YFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGR 204
Y +T+ I++ TL G I + V SD+IE+VK +IQ G Q+L+F G++L
Sbjct: 30 YPDDTIMIYL-TLPGSVIPMRVLESDSIESVKLRIQSYRGFVVRNQKLVFGGRELARSNS 88
Query: 205 TLSDYNIQKESTLHLVLDLEEVQL 276
+ DY + + + LHLVL L ++Q+
Sbjct: 89 NMRDYGVSEGNILHLVLKLSDLQV 112
Score = 49.6 bits (113), Expect = 1e-06
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Frame = +1
Query: 13 ILRVVYFSNTMQIF-VKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAG 183
IL +V + +Q+ VKT GK VE I VK +I K G + PD+Q +++ G
Sbjct: 100 ILHLVLKLSDLQVLDVKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEG 159
Query: 184 KQLEDGRTLSDYNIQKESTLHLVL 255
++LED ++D +S LHL++
Sbjct: 160 EKLEDQSLINDICRNDDSVLHLLV 183
>At5g38470.1 68418.m04650 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform I GI:1914683 from [Daucus carota]
Length = 378
Score = 53.2 bits (122), Expect = 1e-07
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 216
M+IFVKTL+G +EV+ +D + +VK I+ +G P +Q LI GK L+D TL +
Sbjct: 1 MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAEYPAAKQMLIHQGKVLKDETTLEE 60
Query: 217 YNIQKESTLHLVL 255
N+ + S + ++L
Sbjct: 61 NNVVENSFIVIML 73
>At5g11080.1 68418.m01294 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 352
Score = 51.2 bits (117), Expect = 4e-07
Identities = 27/75 (36%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Frame = +1
Query: 31 FSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRT 207
F++ ++I +K L T TL VE + + ++K I G+ P++Q RL+F G+ L++ +
Sbjct: 7 FTDLIRIKIKILHSTTHTLSVERTIPVRDLKQDICYYCGVSPERQPRLLFRGRVLKNDQR 66
Query: 208 LSDYNIQKESTLHLV 252
LSDY++++ TL+LV
Sbjct: 67 LSDYHVEEGHTLYLV 81
>At2g17200.1 68415.m01986 ubiquitin family protein weak similarity
to PLIC-2 (ubiquitin-like type II) [Homo sapiens]
GI:9937505; contains Pfam profiles PF00240: Ubiquitin
family, PF00627: UBA/TS-N domain
Length = 551
Score = 51.2 bits (117), Expect = 4e-07
Identities = 20/66 (30%), Positives = 38/66 (57%)
Frame = +1
Query: 55 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 234
++ G +++ T+E+ K + +P +QQRLI+ G+ L+D +TL Y +Q +
Sbjct: 22 IRCSNGTKFSVKTSLDSTVESFKELVAQSSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 235 STLHLV 252
T+H+V
Sbjct: 82 HTIHMV 87
>At4g02970.1 68417.m00404 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 270
Score = 50.8 bits (116), Expect = 5e-07
Identities = 25/69 (36%), Positives = 39/69 (56%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 222
M +++ T TG + ++ ++ +T+ +K KI+ +GIP +Q L GK LED DY
Sbjct: 1 MNVYIDTETGSSFSITIDFGETVLEIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 223 IQKESTLHL 249
I ES L L
Sbjct: 61 ILFESRLLL 69
>At2g17190.1 68415.m01985 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 538
Score = 50.8 bits (116), Expect = 5e-07
Identities = 22/66 (33%), Positives = 37/66 (56%)
Frame = +1
Query: 55 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 234
V+ G ++ T+E+ K I +P +QQRLI+ G+ L+D +TL Y +Q +
Sbjct: 22 VRCSNGTKFSVTTSLDSTVESFKELIAQNSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 235 STLHLV 252
T+H+V
Sbjct: 82 HTVHMV 87
>At3g13235.1 68416.m01666 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 414
Score = 49.6 bits (113), Expect = 1e-06
Identities = 22/71 (30%), Positives = 45/71 (63%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 222
M+I V T + ITL+V++ +T+ENVKA ++ + +P QQ+L++ G ++ + LS
Sbjct: 1 MRITVMTAGEQIITLDVDSQETVENVKALLEVESNVPIQQQQLLYNGNEMGNSDKLSALG 60
Query: 223 IQKESTLHLVL 255
++ + L +++
Sbjct: 61 VKDDDLLMMMV 71
>At1g64470.1 68414.m07309 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 213
Score = 48.4 bits (110), Expect = 3e-06
Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Frame = +1
Query: 28 YFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGR 204
Y ++ +F+ +++G T+ + + SD+I VK +IQ G +Q+L+F+G++L +
Sbjct: 30 YSVKSVLVFL-SVSGSTMPMLILESDSIAEVKLRIQTCNGFRVRRQKLVFSGRELARNAS 88
Query: 205 TLSDYNIQKESTLHLVLDL 261
+ DY + S LHLVL L
Sbjct: 89 RVKDYGVTGGSVLHLVLKL 107
Score = 34.7 bits (76), Expect = 0.037
Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +1
Query: 22 VVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKI-QDKEGIPP-DQQRLIFAGKQLE 195
V+ + + + V T GK V+ + +K +I ++ +G P D Q ++F G++L+
Sbjct: 104 VLKLYDPLLVTVITTCGKVFQFHVDRRRNVGYLKKRISKEGKGFPEVDDQEILFKGEKLD 163
Query: 196 DGRTLSDYNIQKESTLHLVL 255
D R + S +HL++
Sbjct: 164 DNRIIDGICKDGNSVIHLLV 183
>At4g03350.1 68417.m00457 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 263
Score = 48.0 bits (109), Expect = 4e-06
Identities = 24/67 (35%), Positives = 37/67 (55%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 222
M + + T TG + ++ ++ +T+ +K KI+ +GIP +Q L GK LED DY
Sbjct: 1 MNVDIDTETGSSFSITIDFGETVLQIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 223 IQKESTL 243
I ES L
Sbjct: 61 ILFESLL 67
>At4g01000.1 68417.m00135 ubiquitin family protein low similarity to
SP|P13117 Ubiquitin. {Neurospora crassa}; contains Pfam
profile PF00240: Ubiquitin family
Length = 415
Score = 48.0 bits (109), Expect = 4e-06
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +1
Query: 34 SNTMQIFVKTLTGKTITLEVEASDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 210
S +Q FV+ L GK++TL + E +K +I ++ IP QRLI G Q+ DG +
Sbjct: 6 SKPLQFFVRLLDGKSLTLSFSSPLAYGEQIKQRIFEQTKIPTHLQRLISGGYQISDGSAI 65
Query: 211 SDYNIQKESTLHLVLDL 261
S Q ++T++LVL L
Sbjct: 66 S----QPDATVNLVLSL 78
>At4g03370.1 68417.m00459 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 295
Score = 47.6 bits (108), Expect = 5e-06
Identities = 22/75 (29%), Positives = 43/75 (57%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 222
M++ V+ +G T ++++ DT+ K KI+ + IP +Q + F GK LED + +++
Sbjct: 1 MKMTVENESGSTFSIDIGLQDTVLTFKRKIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWD 60
Query: 223 IQKESTLHLVLDLEE 267
I + LHL + ++
Sbjct: 61 ILQNPLLHLSISPDD 75
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 47.6 bits (108), Expect = 5e-06
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 213
M+IFVKTL G +EV+ D++ +VK I+ +G P +Q LI GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 214 DYNIQKESTLHLVLD 258
+ + + S + ++++
Sbjct: 61 ENKVAENSFIVIMMN 75
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 47.6 bits (108), Expect = 5e-06
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 213
M+IFVKTL G +EV+ D++ +VK I+ +G P +Q LI GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 214 DYNIQKESTLHLVLD 258
+ + + S + ++++
Sbjct: 61 ENKVAENSFIVIMMN 75
>At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain, Pfam profile
PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 574
Score = 46.0 bits (104), Expect = 1e-05
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Frame = +1
Query: 22 VVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE---GIPPDQQRLIFAGKQL 192
V+ S+ I V+T+ GK L VE S + VK +I KE GIP D + L G++L
Sbjct: 102 VIRLSDLQAISVRTVDGKEFELVVERSRNVGYVKQQIASKEKELGIPRDHE-LTLDGEEL 160
Query: 193 EDGRTLSDYNIQKESTLHLVL 255
+D R ++D ++ +HL++
Sbjct: 161 DDQRLITDLCQNGDNVIHLLI 181
Score = 45.2 bits (102), Expect = 3e-05
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = +1
Query: 61 TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE-DGRTLSDYNIQKES 237
T+ G I V SD+I +VK +IQ +G +Q+L++ G+++ + + DY +
Sbjct: 38 TIAGSVIPKRVMESDSIASVKLRIQSIKGFFVKKQKLLYDGREVSRNDSQIRDYGLADGK 97
Query: 238 TLHLVLDLEEVQ 273
LHLV+ L ++Q
Sbjct: 98 LLHLVIRLSDLQ 109
>At1g79650.3 68414.m09289 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 351
Score = 46.0 bits (104), Expect = 1e-05
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 213
M++ VKTL G + V SDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 214 DYNIQKESTLHLVL 255
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
>At1g79650.2 68414.m09288 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 365
Score = 46.0 bits (104), Expect = 1e-05
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 213
M++ VKTL G + V SDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 214 DYNIQKESTLHLVL 255
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
>At1g79650.1 68414.m09287 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 371
Score = 46.0 bits (104), Expect = 1e-05
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 213
M++ VKTL G + V SDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 214 DYNIQKESTLHLVL 255
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
[Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
Pfam domains, PF00439: Bromodomain and PF00240:
Ubiquitin family
Length = 1919
Score = 46.0 bits (104), Expect = 1e-05
Identities = 22/72 (30%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = +1
Query: 40 TMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSD 216
+M+I VK+L GK L V +++ +++AK K + ++ + GK+L+D ++L+
Sbjct: 660 SMKIIVKSLGGKGSKLHVGIEESVSSLRAKASRKLDFKETEAVKMFYKGKELDDEKSLAA 719
Query: 217 YNIQKESTLHLV 252
N+Q S +HL+
Sbjct: 720 QNVQPNSLVHLI 731
>At1g16190.1 68414.m01939 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota]
Length = 368
Score = 46.0 bits (104), Expect = 1e-05
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 213
M++ VKTL G + V +DTI VK I+D K+ P QQ LI GK L+D TL
Sbjct: 1 MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60
Query: 214 DYNIQKESTLHLVL 255
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
>At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding
bromodomain-containing protein low similarity to
SP|P51123 Transcription initiation factor TFIID 230 kDa
subunit {Drosophila melanogaster}; contains Pfam
profiles: PF00439 bromodomain, PF00240: Ubiquitin family
Length = 1700
Score = 45.6 bits (103), Expect = 2e-05
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Frame = +1
Query: 40 TMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSD 216
TM+I + L GK L V +++ ++KAK K + ++ + GK+LED ++L++
Sbjct: 499 TMKIKLSNLGGKGSLLTVGREESVSSLKAKASRKLDFKETEAVKMFYMGKELEDEKSLAE 558
Query: 217 YNIQKESTLHLV 252
N+Q S +HL+
Sbjct: 559 QNVQPNSLVHLL 570
>At4g05230.1 68417.m00789 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 206
Score = 44.4 bits (100), Expect = 5e-05
Identities = 23/79 (29%), Positives = 39/79 (49%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 222
M +F +T +G T +E+ DT+ +K KI+ + IP +Q L+F G L+D +
Sbjct: 1 MDVFFETRSGSTFEIELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQDHLDIEQCV 60
Query: 223 IQKESTLHLVLDLEEVQLN 279
I S + L + + N
Sbjct: 61 ILNHSRIQLSISSPDQSRN 79
>At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquitin
SP:P42740 from [Aglaothamnion neglectum]
Length = 79
Score = 43.6 bits (98), Expect = 8e-05
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK---QLEDGRTLS 213
MQ+F+ GK +EVE + TI ++K KI D G+ Q L GK ++ G T+
Sbjct: 1 MQVFIIDEDGKKYCVEVEKTTTIADMKTKIYDATGMENAYQYLEHRGKIVLEVHGGTTMD 60
Query: 214 DYNIQKESTLHL 249
DY I+ H+
Sbjct: 61 DYKIKACDIFHM 72
>At3g06455.1 68416.m00747 splicing factor-related contains weak
similarity to Swiss-Prot:Q12874 splicing factor 3A
subunit 3 (Spliceosome associated protein 61, SAP 61,
SF3a60) [Homo sapiens]
Length = 366
Score = 41.9 bits (94), Expect = 2e-04
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 219
+Q FV+ L GK++TL + E +K +I ++ IP QRLI G Q+ +S
Sbjct: 9 LQFFVRLLDGKSVTLTFSSPIACGEQIKQRIFEQTKIPTHLQRLISGGFQIPGASAIS-- 66
Query: 220 NIQKESTLHLVLDL 261
Q ++T++LVL L
Sbjct: 67 --QSDTTMNLVLSL 78
>At4g03360.1 68417.m00458 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 284
Score = 40.7 bits (91), Expect = 6e-04
Identities = 20/75 (26%), Positives = 41/75 (54%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 222
+++ ++ +G + T++V DT+ +K KI+ +G P +Q LIF K L+D +
Sbjct: 2 IKVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 61
Query: 223 IQKESTLHLVLDLEE 267
I+ S + L + ++
Sbjct: 62 IRHNSRILLSISPDD 76
>At4g02950.1 68417.m00402 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 40.7 bits (91), Expect = 6e-04
Identities = 21/81 (25%), Positives = 41/81 (50%)
Frame = +1
Query: 25 VYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 204
V + + ++ +G + T++V DT+ +K KI+ +G P +Q LIF K L+D
Sbjct: 30 VSIDTMISVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHL 89
Query: 205 TLSDYNIQKESTLHLVLDLEE 267
+ I+ S + L + ++
Sbjct: 90 NMFGCQIRHNSRILLSISPDD 110
>At2g30100.1 68415.m03663 ubiquitin family protein low similarity to
SP|Q9UQ13 Leucine-rich repeat protein SHOC-2
(Ras-binding protein Sur-8) {Homo sapiens}; contains
Pfam profiles PF00240: Ubiquitin family, PF01535: PPR
repeat, PF00560: Leucine Rich Repeat
Length = 897
Score = 40.3 bits (90), Expect = 7e-04
Identities = 23/72 (31%), Positives = 42/72 (58%)
Frame = +1
Query: 37 NTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 216
+T+++ VK GK+I L V T++++K+++Q + P Q+LIF GK L + TL
Sbjct: 534 STIKLTVK-FGGKSIPLSVSPDCTVKDLKSQLQPITNVLPRGQKLIFKGKVLVETSTLKQ 592
Query: 217 YNIQKESTLHLV 252
++ + L L+
Sbjct: 593 SDVGSGAKLMLM 604
>At1g53980.1 68414.m06149 polyubiquitin-related contains similarity
to polyubiquitin GI:166336 from (Aglaothamnion
neglectum)
Length = 91
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 156
M IFV TL GKT LEV+ S+ I+ VK I D+ +PP
Sbjct: 49 MSIFVSTLKGKTFNLEVKGSEIIQQVKNMIHDQ--VPP 84
Score = 28.7 bits (61), Expect = 2.4
Identities = 14/25 (56%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVE-ASDTIE 114
M+I +KT GKTI LE+E +S+TI+
Sbjct: 1 MKILIKTEKGKTINLELEDSSETID 25
>At4g05250.1 68417.m00793 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 39.5 bits (88), Expect = 0.001
Identities = 21/72 (29%), Positives = 37/72 (51%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 222
M +F +T +G +E+ DT+ +K KI+ + IP +Q LIF G L+D +
Sbjct: 1 MDVFFETQSGDKFEIELGYWDTMLEIKEKIEKYQCIPVSKQTLIFQGVVLQDHLDIKQCV 60
Query: 223 IQKESTLHLVLD 258
I S + + ++
Sbjct: 61 ILNHSHIQIFVE 72
>At4g05270.1 68417.m00797 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 129
Score = 37.5 bits (83), Expect = 0.005
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG-KQLEDGRTLSDY 219
M+ V+ L G + LEV+ DT+ VK KI+ + IP +Q LI G L + T+
Sbjct: 1 MKFLVENLNGSSFELEVDYRDTLLVVKQKIERSQHIPVSKQTLIVDGIVILREDLTVEQC 60
Query: 220 NIQKESTLHLVLDLEE 267
I S + L + ++
Sbjct: 61 QIVPTSDIQLEVSSDD 76
>At4g05310.1 68417.m00809 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 415
Score = 37.1 bits (82), Expect = 0.007
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +1
Query: 43 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 183
M+ V+ L G + +EVE +DT+ VK KI+ + +P +Q LI G
Sbjct: 1 MKFVVEILGGSSFEIEVERTDTLLVVKQKIEKSQRVPVSKQTLIVDG 47
>At5g14360.1 68418.m01678 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 163
Score = 36.7 bits (81), Expect = 0.009
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +1
Query: 85 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLD 258
L +EA+ T +K + G+ P QQRL+F GK+ ED L + + + L+ D
Sbjct: 83 LSIEATSTFGELKMVLSLLTGLEPKQQRLVFKGKEREDHEYLHMVGVGDKDKVLLLED 140
>At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase
family protein similar to phosphatidylinositol 4-kinase
type-II beta [Homo sapiens] GI:20159767; contains Pfam
profile PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 630
Score = 35.1 bits (77), Expect = 0.028
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +1
Query: 46 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207
++FV+T TG + LE++ SD VK K+Q P ++ L F L++ T
Sbjct: 42 RVFVQTETGCVLGLELDRSDNAHTVKRKLQVALNFPIEESSLTFGDLVLKNDLT 95
>At5g40630.1 68418.m04932 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 165
Score = 34.7 bits (76), Expect = 0.037
Identities = 19/68 (27%), Positives = 33/68 (48%)
Frame = +1
Query: 55 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 234
V T++ + + ++A+ T +K I GI +QRL+F GK+ ED L +
Sbjct: 83 VSTVSQLSYEISIDANSTFGELKMMIAIVSGIEAKEQRLLFRGKEREDREYLHMIGVGDG 142
Query: 235 STLHLVLD 258
+ L+ D
Sbjct: 143 DKVFLLQD 150
>At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N
domain-containing protein low similarity to NUB1
(NEDD8-interacting protein) [Homo sapiens] GI:13383476;
contains Pfam profile PF00627: UBA/TS-N domain
Length = 562
Score = 33.1 bits (72), Expect = 0.11
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Frame = +1
Query: 85 LEVEASD-TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG----RTLSDYNIQKESTL 243
LEVE + T+ ++ ++ + G+ P+ +LIFAGK L+D TLS I++ S +
Sbjct: 14 LEVELENWTLNMLRDEVAKRSGLDPESIKLIFAGKILKDDGDATLTLSQLGIKENSKI 71
>At4g27180.1 68417.m03904 kinesin-like protein B (KATB)
Length = 745
Score = 29.1 bits (62), Expect = 1.8
Identities = 26/83 (31%), Positives = 48/83 (57%), Gaps = 7/83 (8%)
Frame = +1
Query: 55 VKTLTGKTITLEVEASDTIENVKAK--IQDKEGIPPDQQRLIFAGKQLE--DGRT---LS 213
++TL + T + + DTI +++K +Q+KE I Q +L+ + ++L+ D T ++
Sbjct: 287 IETLQAEA-TKQNDFKDTINELESKCSVQNKE-IEELQDQLVASERKLQVADLSTFEKMN 344
Query: 214 DYNIQKESTLHLVLDLEEVQLNL 282
++ QKES + L LEE +L L
Sbjct: 345 EFEEQKESIMELKGRLEEAELKL 367
>At1g47680.1 68414.m05297 hypothetical protein
Length = 104
Score = 28.7 bits (61), Expect = 2.4
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +1
Query: 94 EASDTIENVKAKIQDKEG-IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 249
E D +E++ K ++ G + +L +G+Q+ R L DY +Q E+T L
Sbjct: 31 EEDDGMEDITKKYHNEVGEVVQGVPQLRRSGRQISQSRYLEDYVMQSETTYGL 83
>At4g05240.1 68417.m00791 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 197
Score = 28.3 bits (60), Expect = 3.2
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +1
Query: 85 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLD 258
+E+ DT+ +K KI+ + I +Q L F G L+D + I S L + +D
Sbjct: 72 IELGYWDTVLEIKQKIEKYQRILVYRQTLFFQGNVLQDHLDIEQCVILNHSLLKVFVD 129
>At2g19180.1 68415.m02238 expressed protein
Length = 179
Score = 27.9 bits (59), Expect = 4.2
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2
Query: 459 YNKFPIWLLFXP*SSFWV 406
+N P WL F P SSFWV
Sbjct: 73 HNSTPDWLPFAPGSSFWV 90
>At1g22050.1 68414.m02758 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 119
Score = 27.9 bits (59), Expect = 4.2
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 7/46 (15%)
Frame = +1
Query: 100 SDTIENVKAKI-----QDKEGIPP--DQQRLIFAGKQLEDGRTLSD 216
S T+ ++K K+ +DKE P + +LI AGK LE+ RTL++
Sbjct: 28 SMTVSSLKEKLISQWPKDKENTPKTVNDMKLINAGKILENNRTLAE 73
>At3g46530.1 68416.m05051 disease resistance protein, RPP13-like
(CC-NBS class), putative domain signature CC-NBS exists,
suggestive of a disease resistance protein. Closest
homolog in Col-0 to RPP13.
Length = 835
Score = 27.5 bits (58), Expect = 5.6
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -2
Query: 177 KDETLLVWRNTFLVLDFSFDIFDSVGSFHLQ 85
+DE W LVLDF++D+ D + ++HL+
Sbjct: 54 EDEVSKEWSK--LVLDFAYDVEDVLDTYHLK 82
>At3g45755.1 68416.m04945 hypothetical protein
Length = 296
Score = 27.5 bits (58), Expect = 5.6
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = -1
Query: 322 IFSQLYFMARMRREGSIVPPLSLKPGEVWIL--SGCYSLKECGHLLIVSRQR*DVVGLEE 149
+ S+L+F + R S P + L+ ++W +GCY +K L+ +Q+ E+
Sbjct: 53 LLSELFFSPDVVRIMSYPPNIGLEDSDIWAYNRNGCYIVKSGNWLISHLKQQPPPPTHEQ 112
Query: 148 YLPCL 134
CL
Sbjct: 113 VTRCL 117
>At3g14530.1 68416.m01841 geranylgeranyl pyrophosphate synthase,
putative / GGPP synthetase, putative /
farnesyltranstransferase, putative similar to SP|P34802
Geranylgeranyl pyrophosphate synthetase, chloroplast
precursor (GGPP synthetase) (GGPS) [Includes:
Dimethylallyltransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10);
Farnesyltranstransferase (EC 2.5.1.29)] {Arabidopsis
thaliana}; contains Pfam profile PF00348: Polyprenyl
synthetase
Length = 360
Score = 27.5 bits (58), Expect = 5.6
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = -1
Query: 316 SQLYFMARMRREGSIVPPLSLKPGEVWILSGCYSLKECGHLL 191
S L+ +R RR+ SI SL+ V LS + ++ GH++
Sbjct: 10 SSLFSQSRGRRDNSISSVKSLRKRTVLSLSSALTSQDAGHMI 51
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 27.1 bits (57), Expect = 7.4
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +1
Query: 64 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 201
+TG T E DTI K ++ G P + ++F+G DG
Sbjct: 323 VTGMRTTKEARIGDTIYRTKTTVEPLPGFKP-VRHMVFSGVYPADG 367
>At5g26190.1 68418.m03116 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 556
Score = 27.1 bits (57), Expect = 7.4
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +3
Query: 222 HPERIHTSP-GFRLRGGTIEPSLRILAMKYNCEKMICRKCYARLHPRATNCRKTKCGHTN 398
HP ++H G+R R ++L M YNC + + C A L + T H
Sbjct: 71 HPLKLHERIIGYRRRDQCCLCRYKLLDMFYNCSRCMFEVCMACLKRPLLIYKTTSHKHPL 130
Query: 399 NLRP 410
+L P
Sbjct: 131 SLMP 134
>At3g47160.1 68416.m05120 expressed protein similar to MTD2
[Medicago truncatula] GI:9294812; supporting cDNA
gi|25083983|gb|BT002136.1|
Length = 245
Score = 27.1 bits (57), Expect = 7.4
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +3
Query: 309 NCEKMICRKCYARLHPRATNC 371
NC +C KCY H R+ +C
Sbjct: 161 NCTHSLCIKCYRDWHGRSESC 181
>At4g16070.1 68417.m02437 lipase class 3 family protein low
similarity to calmodulin-binding heat-shock protein
CaMBP [Nicotiana tabacum] GI:1087073; contains Pfam
profile PF01764: Lipase, PF03893: Lipase 3 N-terminal
region
Length = 654
Score = 26.6 bits (56), Expect = 9.8
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = -3
Query: 389 SALCLATVGSTRMKTGIAFTANHFLTVILHGENAKGRFNCTS 264
SA C + M +A + HF+T I++G + F+ +S
Sbjct: 280 SATCFTFAPAACMTWDLAESGKHFITTIINGSDLVPTFSASS 321
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,150,036
Number of Sequences: 28952
Number of extensions: 229481
Number of successful extensions: 822
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 816
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 927799552
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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