Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0354
         (555 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   3.1  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   7.2  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   9.5  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   9.5  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 7/21 (33%), Positives = 10/21 (47%)
 Frame = -2

Query: 242 HSHYHNLNGAALCQLCIKKCS 180
           H  YH  +    C +C  +CS
Sbjct: 489 HMGYHGFHNPFTCNMCGVECS 509


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +1

Query: 478 LSYNVDKRGRFLNFVN 525
           LSY+V    ++L+F+N
Sbjct: 192 LSYHVPSLSKYLDFIN 207


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 253 LNLRIDFVFPPCWLAYL 303
           + L I FVF  CW  Y+
Sbjct: 287 MTLVIVFVFVLCWSPYI 303


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -2

Query: 533 MTKLTKFRKRPLL 495
           + +L KF+K+PLL
Sbjct: 214 LLRLPKFKKKPLL 226


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,878
Number of Sequences: 336
Number of extensions: 2440
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13725787
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)