Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0354
         (555 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeo...    24   2.9  
DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    23   8.9  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    23   8.9  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   8.9  

>AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeotic
           protein protein.
          Length = 324

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +2

Query: 359 NEDPPDVELNERRPPNSLFSSSNLR 433
           ++ PP +   ++ PPNS  +SS L+
Sbjct: 207 HQQPPPLHQGQQAPPNSQNASSGLQ 231


>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 22.6 bits (46), Expect = 8.9
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = -2

Query: 368 DLRCLVDVHSSYMR 327
           D+ C++ VH++Y+R
Sbjct: 107 DIECMLKVHAAYVR 120


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 22.6 bits (46), Expect = 8.9
 Identities = 13/53 (24%), Positives = 22/53 (41%)
 Frame = -2

Query: 230 HNLNGAALCQLCIKKCS*QSTQHVDLLVALISPLMERYAAKSISKKNAVSQKC 72
           H + G      CI+       ++V   VAL   +   Y A ++ +K  V  +C
Sbjct: 583 HGVPGLQQLCCCIRHTPPAIARNVGSSVALAGEMNGLYGASALRRKAGVRVRC 635


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 22.6 bits (46), Expect = 8.9
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = +2

Query: 380 ELNERRPPNSLFSSSNLRVYQGTGDVPRVHRNY*VITSTKEGA 508
           +  ER  P  + S  N+    G GDV  VH+   +   +K G+
Sbjct: 748 DFKERAKPK-IGSKDNITYKPGGGDVKIVHQKLDIKAESKIGS 789


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 535,918
Number of Sequences: 2352
Number of extensions: 10471
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51722361
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)