Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0350
         (399 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006795-1|AAF59492.2|  435|Caenorhabditis elegans Hypothetical ...    31   0.40 
Z68299-2|CAA92611.2|  344|Caenorhabditis elegans Hypothetical pr...    27   3.7  
AL110479-3|CAB60312.2|  330|Caenorhabditis elegans Hypothetical ...    27   5.0  
U53339-5|AAA96201.1|  342|Caenorhabditis elegans Serpentine rece...    27   6.5  
U28929-4|AAA68347.3|  338|Caenorhabditis elegans Hypothetical pr...    27   6.5  
Z93383-6|CAB07623.1|  283|Caenorhabditis elegans Hypothetical pr...    26   8.7  

>AC006795-1|AAF59492.2|  435|Caenorhabditis elegans Hypothetical
           protein Y50D4B.7 protein.
          Length = 435

 Score = 30.7 bits (66), Expect = 0.40
 Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
 Frame = +3

Query: 51  SNVILSTNNFVNXNPQIPLQETRYVVXTGENRQFIHIN-EPPIIVQEHDSQPQXKVCSTT 227
           + +I +    +N  P+IP+ ++  +     ++ FIHIN +  I V + D +   KV S +
Sbjct: 165 NGIIKACPYLLNICPKIPINQSLTIEKPTSDKLFIHINLDKDIKVFKADLKNGNKVESFS 224

Query: 228 KDVFW 242
            +V+W
Sbjct: 225 IEVYW 229


>Z68299-2|CAA92611.2|  344|Caenorhabditis elegans Hypothetical
           protein T04B2.4 protein.
          Length = 344

 Score = 27.5 bits (58), Expect = 3.7
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -3

Query: 178 IIGGSFMWINCLFSPVXTTYL 116
           +IGG F+++NCLF  +   YL
Sbjct: 205 VIGGVFLFVNCLFLVLTYCYL 225


>AL110479-3|CAB60312.2|  330|Caenorhabditis elegans Hypothetical
           protein Y105C5B.4 protein.
          Length = 330

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = -3

Query: 175 IGGSFMWINCLFSPVXTTYL 116
           IGGSF+++NCL+  +   YL
Sbjct: 191 IGGSFLFLNCLYLIIAYFYL 210


>U53339-5|AAA96201.1|  342|Caenorhabditis elegans Serpentine
           receptor, class b (beta)protein 16 protein.
          Length = 342

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
 Frame = -2

Query: 227 SSTTNFXLWLAIMFLYDYRRFIYVDKLSIFSCXYYVSCLLKWNLGIXIN-KIIGTKYHIA 51
           +S T F +   I++L     ++ +   SIF+C Y++   + WN     N K++ T Y  A
Sbjct: 12  NSATAFSVGYQIVYLI----YVVLSVTSIFTCSYFIKTFI-WNSTFHPNFKLLLTMYFFA 66


>U28929-4|AAA68347.3|  338|Caenorhabditis elegans Hypothetical
           protein F09C12.6 protein.
          Length = 338

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = -2

Query: 179 DYRRFIYVDKLSIFSCXYYVSCLLKWNLGIXINKII 72
           DY  FIY+  +S +   + ++C+        INK++
Sbjct: 192 DYATFIYICNISGYLFSFLINCITMIKASSTINKLV 227


>Z93383-6|CAB07623.1|  283|Caenorhabditis elegans Hypothetical
           protein F54B8.6 protein.
          Length = 283

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
 Frame = -2

Query: 251 ASIPKDVFSSTTNFXLWLAIMF-LYDYRRFIYVDKLSIFSCXYYVSCLLKWNLGIXINK 78
           AS+   +  S +   L + +++ ++  ++ I+   LSIF C +++   L   L + INK
Sbjct: 7   ASLILTIICSQSLCCLMIYLLYSIFCSKKIIFKPSLSIFYCRFFIDVFL--TLSVSINK 63


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,070,535
Number of Sequences: 27780
Number of extensions: 107762
Number of successful extensions: 238
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 238
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 619699724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)