Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0348
         (399 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L20868-1|AAA60281.2|  426|Homo sapiens ribosomal protein L4 prot...   100   2e-21
AB208977-1|BAD92214.1|  441|Homo sapiens ribosomal protein L4 va...   100   4e-21
D23660-1|BAA04887.1|  427|Homo sapiens ribosomal protein protein.      99   5e-21
BC095427-1|AAH95427.1|  427|Homo sapiens ribosomal protein L4 pr...    99   5e-21
BC066925-1|AAH66925.1|  427|Homo sapiens ribosomal protein L4 pr...    99   5e-21
BC014653-1|AAH14653.1|  427|Homo sapiens ribosomal protein L4 pr...    99   5e-21
BC010151-1|AAH10151.1|  427|Homo sapiens ribosomal protein L4 pr...    99   5e-21
BC009888-1|AAH09888.1|  427|Homo sapiens ribosomal protein L4 pr...    99   5e-21
BC007996-1|AAH07996.1|  427|Homo sapiens ribosomal protein L4 pr...    99   5e-21
BC007748-1|AAH07748.1|  427|Homo sapiens ribosomal protein L4 pr...    99   5e-21
BC005817-1|AAH05817.1|  427|Homo sapiens ribosomal protein L4 pr...    99   5e-21
BC001365-1|AAH01365.1|  427|Homo sapiens ribosomal protein L4 pr...    99   5e-21
AK223057-1|BAD96777.1|  427|Homo sapiens ribosomal protein L4 va...    99   5e-21
AB061820-1|BAB79458.1|  427|Homo sapiens ribosomal protein L4 pr...    99   5e-21

>L20868-1|AAA60281.2|  426|Homo sapiens ribosomal protein L4
           protein.
          Length = 426

 Score =  100 bits (240), Expect = 2e-21
 Identities = 57/109 (52%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
 Frame = +1

Query: 67  LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDXVNDVHVSMSKNSRQPYCVSKXAG 246
           ++VARPL+SVYSEK E+  G    LP VFKAPIRPD VN VH ++ KN+RQPY VS+ AG
Sbjct: 1   MAVARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDMVNFVHTNLRKNNRQPYAVSELAG 59

Query: 247 HQTVPNH---GVPDVLLPEFRXSXVVVPIGPSQGAFGNMCXCGXMFXPT 384
           HQT       G     +P  R           QGAFGNMC  G MF PT
Sbjct: 60  HQTRAESWGTGRAVARIPRVRGGGT---HRSGQGAFGNMCRGGRMFAPT 105


>AB208977-1|BAD92214.1|  441|Homo sapiens ribosomal protein L4
           variant protein.
          Length = 441

 Score = 99.5 bits (237), Expect = 4e-21
 Identities = 56/110 (50%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
 Frame = +1

Query: 64  SLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDXVNDVHVSMSKNSRQPYCVSKXA 243
           +++ ARPL+SVYSEK E+  G    LP VFKAPIRPD VN VH ++ KN+RQPY VS+ A
Sbjct: 14  AMACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELA 72

Query: 244 GHQTVPNH---GVPDVLLPEFRXSXVVVPIGPSQGAFGNMCXCGXMFXPT 384
           GHQT       G     +P  R           QGAFGNMC  G MF PT
Sbjct: 73  GHQTSAESWGTGRAVARIPRVRGGGT---HRSGQGAFGNMCRGGRMFAPT 119


>D23660-1|BAA04887.1|  427|Homo sapiens ribosomal protein protein.
          Length = 427

 Score = 99.1 bits (236), Expect = 5e-21
 Identities = 56/109 (51%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
 Frame = +1

Query: 67  LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDXVNDVHVSMSKNSRQPYCVSKXAG 246
           ++ ARPL+SVYSEK E+  G    LP VFKAPIRPD VN VH ++ KN+RQPY VS+ AG
Sbjct: 1   MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59

Query: 247 HQTVPNH---GVPDVLLPEFRXSXVVVPIGPSQGAFGNMCXCGXMFXPT 384
           HQT       G     +P  R           QGAFGNMC  G MF PT
Sbjct: 60  HQTSAESWGTGRAVARIPRVRGGGT---HRSGQGAFGNMCRGGRMFAPT 105


>BC095427-1|AAH95427.1|  427|Homo sapiens ribosomal protein L4
           protein.
          Length = 427

 Score = 99.1 bits (236), Expect = 5e-21
 Identities = 56/109 (51%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
 Frame = +1

Query: 67  LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDXVNDVHVSMSKNSRQPYCVSKXAG 246
           ++ ARPL+SVYSEK E+  G    LP VFKAPIRPD VN VH ++ KN+RQPY VS+ AG
Sbjct: 1   MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59

Query: 247 HQTVPNH---GVPDVLLPEFRXSXVVVPIGPSQGAFGNMCXCGXMFXPT 384
           HQT       G     +P  R           QGAFGNMC  G MF PT
Sbjct: 60  HQTSAESWGTGRAVARIPRVRGGGT---HRSGQGAFGNMCRGGRMFAPT 105


>BC066925-1|AAH66925.1|  427|Homo sapiens ribosomal protein L4
           protein.
          Length = 427

 Score = 99.1 bits (236), Expect = 5e-21
 Identities = 56/109 (51%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
 Frame = +1

Query: 67  LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDXVNDVHVSMSKNSRQPYCVSKXAG 246
           ++ ARPL+SVYSEK E+  G    LP VFKAPIRPD VN VH ++ KN+RQPY VS+ AG
Sbjct: 1   MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59

Query: 247 HQTVPNH---GVPDVLLPEFRXSXVVVPIGPSQGAFGNMCXCGXMFXPT 384
           HQT       G     +P  R           QGAFGNMC  G MF PT
Sbjct: 60  HQTSAESWGTGRAVARIPRVRGGGT---HRSGQGAFGNMCRGGRMFAPT 105


>BC014653-1|AAH14653.1|  427|Homo sapiens ribosomal protein L4
           protein.
          Length = 427

 Score = 99.1 bits (236), Expect = 5e-21
 Identities = 56/109 (51%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
 Frame = +1

Query: 67  LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDXVNDVHVSMSKNSRQPYCVSKXAG 246
           ++ ARPL+SVYSEK E+  G    LP VFKAPIRPD VN VH ++ KN+RQPY VS+ AG
Sbjct: 1   MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59

Query: 247 HQTVPNH---GVPDVLLPEFRXSXVVVPIGPSQGAFGNMCXCGXMFXPT 384
           HQT       G     +P  R           QGAFGNMC  G MF PT
Sbjct: 60  HQTSAESWGTGRAVARIPRVRGGGT---HRSGQGAFGNMCRGGRMFAPT 105


>BC010151-1|AAH10151.1|  427|Homo sapiens ribosomal protein L4
           protein.
          Length = 427

 Score = 99.1 bits (236), Expect = 5e-21
 Identities = 56/109 (51%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
 Frame = +1

Query: 67  LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDXVNDVHVSMSKNSRQPYCVSKXAG 246
           ++ ARPL+SVYSEK E+  G    LP VFKAPIRPD VN VH ++ KN+RQPY VS+ AG
Sbjct: 1   MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59

Query: 247 HQTVPNH---GVPDVLLPEFRXSXVVVPIGPSQGAFGNMCXCGXMFXPT 384
           HQT       G     +P  R           QGAFGNMC  G MF PT
Sbjct: 60  HQTSAESWGTGRAVARIPRVRGGGT---HRSGQGAFGNMCRGGRMFAPT 105


>BC009888-1|AAH09888.1|  427|Homo sapiens ribosomal protein L4
           protein.
          Length = 427

 Score = 99.1 bits (236), Expect = 5e-21
 Identities = 56/109 (51%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
 Frame = +1

Query: 67  LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDXVNDVHVSMSKNSRQPYCVSKXAG 246
           ++ ARPL+SVYSEK E+  G    LP VFKAPIRPD VN VH ++ KN+RQPY VS+ AG
Sbjct: 1   MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59

Query: 247 HQTVPNH---GVPDVLLPEFRXSXVVVPIGPSQGAFGNMCXCGXMFXPT 384
           HQT       G     +P  R           QGAFGNMC  G MF PT
Sbjct: 60  HQTSAESWGTGRAVARIPRVRGGGT---HRSGQGAFGNMCRGGRMFAPT 105


>BC007996-1|AAH07996.1|  427|Homo sapiens ribosomal protein L4
           protein.
          Length = 427

 Score = 99.1 bits (236), Expect = 5e-21
 Identities = 56/109 (51%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
 Frame = +1

Query: 67  LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDXVNDVHVSMSKNSRQPYCVSKXAG 246
           ++ ARPL+SVYSEK E+  G    LP VFKAPIRPD VN VH ++ KN+RQPY VS+ AG
Sbjct: 1   MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59

Query: 247 HQTVPNH---GVPDVLLPEFRXSXVVVPIGPSQGAFGNMCXCGXMFXPT 384
           HQT       G     +P  R           QGAFGNMC  G MF PT
Sbjct: 60  HQTSAESWGTGRAVARIPRVRGGGT---HRSGQGAFGNMCRGGRMFAPT 105


>BC007748-1|AAH07748.1|  427|Homo sapiens ribosomal protein L4
           protein.
          Length = 427

 Score = 99.1 bits (236), Expect = 5e-21
 Identities = 56/109 (51%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
 Frame = +1

Query: 67  LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDXVNDVHVSMSKNSRQPYCVSKXAG 246
           ++ ARPL+SVYSEK E+  G    LP VFKAPIRPD VN VH ++ KN+RQPY VS+ AG
Sbjct: 1   MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59

Query: 247 HQTVPNH---GVPDVLLPEFRXSXVVVPIGPSQGAFGNMCXCGXMFXPT 384
           HQT       G     +P  R           QGAFGNMC  G MF PT
Sbjct: 60  HQTSAESWGTGRAVARIPRVRGGGT---HRSGQGAFGNMCRGGRMFAPT 105


>BC005817-1|AAH05817.1|  427|Homo sapiens ribosomal protein L4
           protein.
          Length = 427

 Score = 99.1 bits (236), Expect = 5e-21
 Identities = 56/109 (51%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
 Frame = +1

Query: 67  LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDXVNDVHVSMSKNSRQPYCVSKXAG 246
           ++ ARPL+SVYSEK E+  G    LP VFKAPIRPD VN VH ++ KN+RQPY VS+ AG
Sbjct: 1   MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59

Query: 247 HQTVPNH---GVPDVLLPEFRXSXVVVPIGPSQGAFGNMCXCGXMFXPT 384
           HQT       G     +P  R           QGAFGNMC  G MF PT
Sbjct: 60  HQTSAESWGTGRAVARIPRVRGGGT---HRSGQGAFGNMCRGGRMFAPT 105


>BC001365-1|AAH01365.1|  427|Homo sapiens ribosomal protein L4
           protein.
          Length = 427

 Score = 99.1 bits (236), Expect = 5e-21
 Identities = 56/109 (51%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
 Frame = +1

Query: 67  LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDXVNDVHVSMSKNSRQPYCVSKXAG 246
           ++ ARPL+SVYSEK E+  G    LP VFKAPIRPD VN VH ++ KN+RQPY VS+ AG
Sbjct: 1   MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59

Query: 247 HQTVPNH---GVPDVLLPEFRXSXVVVPIGPSQGAFGNMCXCGXMFXPT 384
           HQT       G     +P  R           QGAFGNMC  G MF PT
Sbjct: 60  HQTSAESWGTGRAVARIPRVRGGGT---HRSGQGAFGNMCRGGRMFAPT 105


>AK223057-1|BAD96777.1|  427|Homo sapiens ribosomal protein L4
           variant protein.
          Length = 427

 Score = 99.1 bits (236), Expect = 5e-21
 Identities = 56/109 (51%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
 Frame = +1

Query: 67  LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDXVNDVHVSMSKNSRQPYCVSKXAG 246
           ++ ARPL+SVYSEK E+  G    LP VFKAPIRPD VN VH ++ KN+RQPY VS+ AG
Sbjct: 1   MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHANLRKNNRQPYAVSELAG 59

Query: 247 HQTVPNH---GVPDVLLPEFRXSXVVVPIGPSQGAFGNMCXCGXMFXPT 384
           HQT       G     +P  R           QGAFGNMC  G MF PT
Sbjct: 60  HQTSAESWGTGRAVARIPRVRGGGT---HRSGQGAFGNMCRGGRMFAPT 105


>AB061820-1|BAB79458.1|  427|Homo sapiens ribosomal protein L4
           protein.
          Length = 427

 Score = 99.1 bits (236), Expect = 5e-21
 Identities = 56/109 (51%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
 Frame = +1

Query: 67  LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDXVNDVHVSMSKNSRQPYCVSKXAG 246
           ++ ARPL+SVYSEK E+  G    LP VFKAPIRPD VN VH ++ KN+RQPY VS+ AG
Sbjct: 1   MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59

Query: 247 HQTVPNH---GVPDVLLPEFRXSXVVVPIGPSQGAFGNMCXCGXMFXPT 384
           HQT       G     +P  R           QGAFGNMC  G MF PT
Sbjct: 60  HQTSAESWGTGRAVARIPRVRGGGT---HRSGQGAFGNMCRGGRMFAPT 105


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,625,278
Number of Sequences: 237096
Number of extensions: 927542
Number of successful extensions: 1624
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1582
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2870859500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)