Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0348
(399 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X13382-1|CAA31759.1| 407|Drosophila melanogaster protein ( Dros... 97 6e-21
BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p pro... 97 6e-21
AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p pro... 97 6e-21
AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA... 97 6e-21
X06881-1|CAA29998.1| 123|Drosophila melanogaster protein ( Dros... 44 7e-05
BT021357-1|AAX33505.1| 1953|Drosophila melanogaster LP14866p pro... 29 3.0
AE014298-1786|AAF48179.2| 2528|Drosophila melanogaster CG32654-P... 29 3.0
AY071692-1|AAL49314.1| 493|Drosophila melanogaster RH13838p pro... 27 9.2
AY071544-1|AAL49166.1| 493|Drosophila melanogaster RE57978p pro... 27 9.2
AE014297-3534|AAF56288.3| 493|Drosophila melanogaster CG18528-P... 27 9.2
>X13382-1|CAA31759.1| 407|Drosophila melanogaster protein (
Drosophila melanogastermRNA for put. ribosomal protein
L1. ).
Length = 407
Score = 97.5 bits (232), Expect = 6e-21
Identities = 56/111 (50%), Positives = 65/111 (58%), Gaps = 3/111 (2%)
Frame = +1
Query: 61 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDXVNDVHVSMSKNSRQPYCVSKX 240
MSL ARPLVSVY+EK+E + LP VFKAPIRPD VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 241 AGHQTVPNH---GVPDVLLPEFRXSXVVVPIGPSQGAFGNMCXCGXMFXPT 384
AGHQT G +P R QGAFGNMC G MF PT
Sbjct: 61 AGHQTSAESWGTGRAVARIPRVRGGGT---HRSGQGAFGNMCRGGRMFAPT 108
>BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p
protein.
Length = 233
Score = 97.5 bits (232), Expect = 6e-21
Identities = 56/111 (50%), Positives = 65/111 (58%), Gaps = 3/111 (2%)
Frame = +1
Query: 61 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDXVNDVHVSMSKNSRQPYCVSKX 240
MSL ARPLVSVY+EK+E + LP VFKAPIRPD VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 241 AGHQTVPNH---GVPDVLLPEFRXSXVVVPIGPSQGAFGNMCXCGXMFXPT 384
AGHQT G +P R QGAFGNMC G MF PT
Sbjct: 61 AGHQTSAESWGTGRAVARIPRVRGGGT---HRSGQGAFGNMCRGGRMFAPT 108
>AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p
protein.
Length = 401
Score = 97.5 bits (232), Expect = 6e-21
Identities = 56/111 (50%), Positives = 65/111 (58%), Gaps = 3/111 (2%)
Frame = +1
Query: 61 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDXVNDVHVSMSKNSRQPYCVSKX 240
MSL ARPLVSVY+EK+E + LP VFKAPIRPD VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 241 AGHQTVPNH---GVPDVLLPEFRXSXVVVPIGPSQGAFGNMCXCGXMFXPT 384
AGHQT G +P R QGAFGNMC G MF PT
Sbjct: 61 AGHQTSAESWGTGRAVARIPRVRGGGT---HRSGQGAFGNMCRGGRMFAPT 108
>AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA
protein.
Length = 401
Score = 97.5 bits (232), Expect = 6e-21
Identities = 56/111 (50%), Positives = 65/111 (58%), Gaps = 3/111 (2%)
Frame = +1
Query: 61 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDXVNDVHVSMSKNSRQPYCVSKX 240
MSL ARPLVSVY+EK+E + LP VFKAPIRPD VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 241 AGHQTVPNH---GVPDVLLPEFRXSXVVVPIGPSQGAFGNMCXCGXMFXPT 384
AGHQT G +P R QGAFGNMC G MF PT
Sbjct: 61 AGHQTSAESWGTGRAVARIPRVRGGGT---HRSGQGAFGNMCRGGRMFAPT 108
>X06881-1|CAA29998.1| 123|Drosophila melanogaster protein (
Drosophila gene forribosomal protein L1 fragment. ).
Length = 123
Score = 44.0 bits (99), Expect = 7e-05
Identities = 20/28 (71%), Positives = 20/28 (71%)
Frame = +3
Query: 255 SAXSWGTGRAVARIPXXXGXGTHWSXSG 338
SA SWGTGRAVARIP G GTH S G
Sbjct: 4 SAESWGTGRAVARIPRVRGGGTHRSGQG 31
Score = 32.3 bits (70), Expect = 0.24
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +1
Query: 334 QGAFGNMCXCGXMFXPT 384
QGAFGNMC G MF PT
Sbjct: 30 QGAFGNMCRGGRMFAPT 46
>BT021357-1|AAX33505.1| 1953|Drosophila melanogaster LP14866p
protein.
Length = 1953
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +3
Query: 66 SIGSPTFSVGVFREE*DGAGCSQAPPVRIQG--AHTSG 173
++GSP ++VG G G S APP + AH +G
Sbjct: 287 AVGSPIYAVGASSAHSAGVGASPAPPTGVVAPPAHLAG 324
>AE014298-1786|AAF48179.2| 2528|Drosophila melanogaster CG32654-PC
protein.
Length = 2528
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +3
Query: 66 SIGSPTFSVGVFREE*DGAGCSQAPPVRIQG--AHTSG 173
++GSP ++VG G G S APP + AH +G
Sbjct: 287 AVGSPIYAVGASSAHSAGVGASPAPPTGVVAPPAHLAG 324
>AY071692-1|AAL49314.1| 493|Drosophila melanogaster RH13838p
protein.
Length = 493
Score = 27.1 bits (57), Expect = 9.2
Identities = 13/50 (26%), Positives = 23/50 (46%)
Frame = +1
Query: 148 VFKAPIRPDXVNDVHVSMSKNSRQPYCVSKXAGHQTVPNHGVPDVLLPEF 297
+F RPD D+ ++ SK C+ + GH + + DV+ +F
Sbjct: 442 IFLRDYRPDVYPDMAIAASKLRNSVRCIERITGH--ISCEDILDVVFKDF 489
>AY071544-1|AAL49166.1| 493|Drosophila melanogaster RE57978p
protein.
Length = 493
Score = 27.1 bits (57), Expect = 9.2
Identities = 13/50 (26%), Positives = 23/50 (46%)
Frame = +1
Query: 148 VFKAPIRPDXVNDVHVSMSKNSRQPYCVSKXAGHQTVPNHGVPDVLLPEF 297
+F RPD D+ ++ SK C+ + GH + + DV+ +F
Sbjct: 442 IFLRDYRPDVYPDMAIAASKLRNSVRCIERITGH--ISCEDILDVVFKDF 489
>AE014297-3534|AAF56288.3| 493|Drosophila melanogaster CG18528-PA
protein.
Length = 493
Score = 27.1 bits (57), Expect = 9.2
Identities = 13/50 (26%), Positives = 23/50 (46%)
Frame = +1
Query: 148 VFKAPIRPDXVNDVHVSMSKNSRQPYCVSKXAGHQTVPNHGVPDVLLPEF 297
+F RPD D+ ++ SK C+ + GH + + DV+ +F
Sbjct: 442 IFLRDYRPDVYPDMAIAASKLRNSVRCIERITGH--ISCEDILDVVFKDF 489
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,631,354
Number of Sequences: 53049
Number of extensions: 291984
Number of successful extensions: 606
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 598
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1149697725
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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