Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0347
(598 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC130630-1|AAI30631.1| 830|Homo sapiens PHC2 protein protein. 31 3.1
AL513327-5|CAI13957.1| 858|Homo sapiens polyhomeotic homolog 2 ... 31 3.1
AL513327-4|CAI13956.1| 464|Homo sapiens polyhomeotic homolog 2 ... 31 3.1
AJ419231-1|CAD11673.1| 858|Homo sapiens polyhomeotic 2 protein. 31 3.1
AK024260-1|BAB14863.1| 126|Homo sapiens protein ( Homo sapiens ... 31 4.1
BC131711-1|AAI31712.1| 676|Homo sapiens GRB2-associated binding... 29 9.5
BC111498-1|AAI11499.1| 435|Homo sapiens serpin peptidase inhibi... 29 9.5
BC089422-1|AAH89422.1| 382|Homo sapiens SERPINA9 protein protein. 29 9.5
BC033256-1|AAH33256.1| 319|Homo sapiens FAM83H protein protein. 29 9.5
AY358700-1|AAQ89063.1| 417|Homo sapiens ASYL692 protein. 29 9.5
AY185496-1|AAO32345.1| 370|Homo sapiens SERPINA11 type a protein. 29 9.5
AK127960-1|BAC87207.1| 886|Homo sapiens protein ( Homo sapiens ... 29 9.5
AB018413-1|BAA76737.1| 676|Homo sapiens Gab2 protein. 29 9.5
AB011143-1|BAA25497.2| 683|Homo sapiens KIAA0571 protein protein. 29 9.5
>BC130630-1|AAI30631.1| 830|Homo sapiens PHC2 protein protein.
Length = 830
Score = 31.1 bits (67), Expect = 3.1
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -3
Query: 161 EPGSTPRCPSGTPSMSPQKGSPASQPYTLNR 69
+PG + +C TP PQ G P P+T R
Sbjct: 387 KPGGSQQCHPPTPDTGPQNGHPEGVPHTPQR 417
>AL513327-5|CAI13957.1| 858|Homo sapiens polyhomeotic homolog 2
(Drosophila) protein.
Length = 858
Score = 31.1 bits (67), Expect = 3.1
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -3
Query: 161 EPGSTPRCPSGTPSMSPQKGSPASQPYTLNR 69
+PG + +C TP PQ G P P+T R
Sbjct: 416 KPGGSQQCHPPTPDTGPQNGHPEGVPHTPQR 446
>AL513327-4|CAI13956.1| 464|Homo sapiens polyhomeotic homolog 2
(Drosophila) protein.
Length = 464
Score = 31.1 bits (67), Expect = 3.1
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -3
Query: 161 EPGSTPRCPSGTPSMSPQKGSPASQPYTLNR 69
+PG + +C TP PQ G P P+T R
Sbjct: 21 KPGGSQQCHPPTPDTGPQNGHPEGVPHTPQR 51
>AJ419231-1|CAD11673.1| 858|Homo sapiens polyhomeotic 2 protein.
Length = 858
Score = 31.1 bits (67), Expect = 3.1
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -3
Query: 161 EPGSTPRCPSGTPSMSPQKGSPASQPYTLNR 69
+PG + +C TP PQ G P P+T R
Sbjct: 416 KPGGSQQCHPPTPDTGPQNGHPEGVPHTPQR 446
>AK024260-1|BAB14863.1| 126|Homo sapiens protein ( Homo sapiens
cDNA FLJ14198 fis, clone NT2RP3002512. ).
Length = 126
Score = 30.7 bits (66), Expect = 4.1
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +1
Query: 112 GDIDGVPLGQRGVLPGSTQINRKCFREGESRRAPSAGPML 231
G++ V G+R +LP Q+ C +EG SRR G +L
Sbjct: 18 GNVTVVQKGERDILPNGQQV-LVCSQEGSSRRCGGQGDLL 56
>BC131711-1|AAI31712.1| 676|Homo sapiens GRB2-associated binding
protein 2 protein.
Length = 676
Score = 29.5 bits (63), Expect = 9.5
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = -3
Query: 146 PRCPSGTPSMSPQKGSPASQPYTLNRN*TVAAVSSRRNS--PHTQKRVHR 3
PR P + + +P+ GSP +P + +VAA RRN+ R+HR
Sbjct: 353 PRPPKPSQAETPRWGSPQQRPPISENSRSVAATIPRRNTLPAMDNSRLHR 402
>BC111498-1|AAI11499.1| 435|Homo sapiens serpin peptidase
inhibitor, clade A (alpha-1 antiproteinase,
antitrypsin), memb protein.
Length = 435
Score = 29.5 bits (63), Expect = 9.5
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -3
Query: 167 CVEPGSTPRCPSGTPSMSPQKGSPASQPYTLN 72
CV P + P S P S K +PASQ Y+LN
Sbjct: 38 CVSPANAP---SAYPRPSSTKSTPASQVYSLN 66
>BC089422-1|AAH89422.1| 382|Homo sapiens SERPINA9 protein protein.
Length = 382
Score = 29.5 bits (63), Expect = 9.5
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -3
Query: 167 CVEPGSTPRCPSGTPSMSPQKGSPASQPYTLN 72
CV P + P S P S K +PASQ Y+LN
Sbjct: 28 CVSPANAP---SAYPRPSSTKSTPASQVYSLN 56
>BC033256-1|AAH33256.1| 319|Homo sapiens FAM83H protein protein.
Length = 319
Score = 29.5 bits (63), Expect = 9.5
Identities = 19/44 (43%), Positives = 21/44 (47%)
Frame = -3
Query: 158 PGSTPRCPSGTPSMSPQKGSPASQPYTLNRN*TVAAVSSRRNSP 27
PG + R S T QKGSP S Y R V V RR+SP
Sbjct: 24 PGFSTRRGSPTTGFIEQKGSPTS-AYPERRGSPVPPVPERRSSP 66
>AY358700-1|AAQ89063.1| 417|Homo sapiens ASYL692 protein.
Length = 417
Score = 29.5 bits (63), Expect = 9.5
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -3
Query: 167 CVEPGSTPRCPSGTPSMSPQKGSPASQPYTLN 72
CV P + P S P S K +PASQ Y+LN
Sbjct: 20 CVSPANAP---SAYPRPSSTKSTPASQVYSLN 48
>AY185496-1|AAO32345.1| 370|Homo sapiens SERPINA11 type a protein.
Length = 370
Score = 29.5 bits (63), Expect = 9.5
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -3
Query: 167 CVEPGSTPRCPSGTPSMSPQKGSPASQPYTLN 72
CV P + P S P S K +PASQ Y+LN
Sbjct: 38 CVSPANAP---SAYPRPSSTKSTPASQVYSLN 66
>AK127960-1|BAC87207.1| 886|Homo sapiens protein ( Homo sapiens
cDNA FLJ46072 fis, clone TESTI1000459. ).
Length = 886
Score = 29.5 bits (63), Expect = 9.5
Identities = 19/44 (43%), Positives = 21/44 (47%)
Frame = -3
Query: 158 PGSTPRCPSGTPSMSPQKGSPASQPYTLNRN*TVAAVSSRRNSP 27
PG + R S T QKGSP S Y R V V RR+SP
Sbjct: 591 PGFSTRRGSPTTGFIEQKGSPTS-AYPERRGSPVPPVPERRSSP 633
>AB018413-1|BAA76737.1| 676|Homo sapiens Gab2 protein.
Length = 676
Score = 29.5 bits (63), Expect = 9.5
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = -3
Query: 146 PRCPSGTPSMSPQKGSPASQPYTLNRN*TVAAVSSRRNS--PHTQKRVHR 3
PR P + + +P+ GSP +P + +VAA RRN+ R+HR
Sbjct: 353 PRPPKPSQAETPRWGSPQQRPPISENSRSVAATIPRRNTLPAMDNSRLHR 402
>AB011143-1|BAA25497.2| 683|Homo sapiens KIAA0571 protein protein.
Length = 683
Score = 29.5 bits (63), Expect = 9.5
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = -3
Query: 146 PRCPSGTPSMSPQKGSPASQPYTLNRN*TVAAVSSRRNS--PHTQKRVHR 3
PR P + + +P+ GSP +P + +VAA RRN+ R+HR
Sbjct: 360 PRPPKPSQAETPRWGSPQQRPPISENSRSVAATIPRRNTLPAMDNSRLHR 409
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,729,820
Number of Sequences: 237096
Number of extensions: 1985997
Number of successful extensions: 9151
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 8738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9149
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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