Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0346
(598 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0211 - 1601129-1601272,1601670-1602062,1602142-1602240,160... 91 8e-19
11_01_0210 - 1647922-1648065,1648459-1648851,1648930-1649028,164... 91 8e-19
08_01_0215 - 1714224-1714364,1714795-1715187,1715279-1715377,171... 91 8e-19
02_01_0561 + 4120268-4120339,4121462-4121588,4121715-4121770,412... 32 0.40
11_01_0676 - 5511755-5511831,5512857-5513052,5513462-5513577,551... 31 0.92
03_02_0600 - 9748382-9748933,9749805-9749840,9751164-9751218,975... 31 0.92
06_01_0090 - 724296-724532,724756-724938,725038-725088,725520-72... 30 1.2
11_01_0033 - 251730-251855,252068-252144,252228-252318,252644-25... 29 2.1
11_01_0355 + 2679561-2680985,2681183-2682295 29 2.8
01_05_0339 + 21135250-21135467,21136465-21137513,21137905-21138962 29 2.8
12_01_0032 - 266954-267079,267204-267245,267290-267366,267450-26... 29 3.7
10_08_0911 - 21499196-21499236,21499368-21499488,21499665-214997... 29 3.7
07_03_1762 - 29299328-29299437,29299782-29299871,29300487-293012... 29 3.7
07_03_0196 + 14995224-14995489,14995859-14995877,14996703-149968... 29 3.7
09_04_0351 + 16904075-16904738,16906285-16906366,16906533-169066... 28 4.9
06_01_0349 + 2529279-2530446,2532232-2533036,2533066-2533106,253... 28 4.9
03_04_0243 + 19298293-19299117 28 4.9
10_08_0406 - 17688069-17690643,17691065-17691132 28 6.5
11_08_0037 + 27859867-27860382,27860471-27861440,27861647-278619... 27 8.6
03_01_0410 - 3166651-3166815,3166901-3167218,3167305-3167652 27 8.6
02_04_0618 - 24428987-24429331,24429946-24430387,24433358-24433434 27 8.6
>12_01_0211 -
1601129-1601272,1601670-1602062,1602142-1602240,
1602920-1602988,1603071-1603328
Length = 320
Score = 90.6 bits (215), Expect = 8e-19
Identities = 63/171 (36%), Positives = 83/171 (48%), Gaps = 4/171 (2%)
Frame = +3
Query: 66 REDKATWXSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLXGSSIVLMGKNTMMR 245
+ KA Y K+ QLLDEY K I ADNVGS Q+Q+IR L G SIVLMGKNT++R
Sbjct: 4 KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIR 63
Query: 246 KAIK----TTWTTIQPSRNCCHTSRATLASCSPAETSLRSVTNCWRTKSKLQLVLVPLPH 413
+ IK T L +R ++ + ++ LV
Sbjct: 64 RCIKVHADNTGNKDFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLV--AP 121
Query: 414 CQSSFPPTTPGLGPEKTSFFQALSIPTKXSKGLLKSSTMXHILXXGDKXWS 566
PP GL P +TSFFQ L+IPTK +KG ++ T ++ GDK S
Sbjct: 122 VDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGS 172
Score = 82.2 bits (194), Expect = 3e-16
Identities = 43/94 (45%), Positives = 58/94 (61%)
Frame = +2
Query: 251 HQDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIP 430
H D+ N LE L+P + GNVG +FT+GDL EVR+++ + KV APAR G +AP+ VV+P
Sbjct: 69 HADNTGNKDFLE-LMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVP 127
Query: 431 AHNTGPRSREDLFLPGSFYPXQXFKGTIEIINDV 532
NTG + F P + KGT+EII V
Sbjct: 128 PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPV 161
>11_01_0210 -
1647922-1648065,1648459-1648851,1648930-1649028,
1649706-1649774,1649877-1650134
Length = 320
Score = 90.6 bits (215), Expect = 8e-19
Identities = 63/171 (36%), Positives = 83/171 (48%), Gaps = 4/171 (2%)
Frame = +3
Query: 66 REDKATWXSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLXGSSIVLMGKNTMMR 245
+ KA Y K+ QLLDEY K I ADNVGS Q+Q+IR L G SIVLMGKNT++R
Sbjct: 4 KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIR 63
Query: 246 KAIK----TTWTTIQPSRNCCHTSRATLASCSPAETSLRSVTNCWRTKSKLQLVLVPLPH 413
+ IK T L +R ++ + ++ LV
Sbjct: 64 RCIKVHADNTGNKDFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLV--AP 121
Query: 414 CQSSFPPTTPGLGPEKTSFFQALSIPTKXSKGLLKSSTMXHILXXGDKXWS 566
PP GL P +TSFFQ L+IPTK +KG ++ T ++ GDK S
Sbjct: 122 VDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGS 172
Score = 82.2 bits (194), Expect = 3e-16
Identities = 43/94 (45%), Positives = 58/94 (61%)
Frame = +2
Query: 251 HQDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIP 430
H D+ N LE L+P + GNVG +FT+GDL EVR+++ + KV APAR G +AP+ VV+P
Sbjct: 69 HADNTGNKDFLE-LMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVP 127
Query: 431 AHNTGPRSREDLFLPGSFYPXQXFKGTIEIINDV 532
NTG + F P + KGT+EII V
Sbjct: 128 PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPV 161
>08_01_0215 -
1714224-1714364,1714795-1715187,1715279-1715377,
1716248-1716316,1716408-1716665
Length = 319
Score = 90.6 bits (215), Expect = 8e-19
Identities = 63/171 (36%), Positives = 83/171 (48%), Gaps = 4/171 (2%)
Frame = +3
Query: 66 REDKATWXSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLXGSSIVLMGKNTMMR 245
+ KA Y K+ QLLDEY K I ADNVGS Q+Q+IR L G SIVLMGKNT++R
Sbjct: 4 KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIR 63
Query: 246 KAIK----TTWTTIQPSRNCCHTSRATLASCSPAETSLRSVTNCWRTKSKLQLVLVPLPH 413
+ IK T L +R ++ + ++ LV
Sbjct: 64 RCIKVHADNTGNKEFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLV--AP 121
Query: 414 CQSSFPPTTPGLGPEKTSFFQALSIPTKXSKGLLKSSTMXHILXXGDKXWS 566
PP GL P +TSFFQ L+IPTK +KG ++ T ++ GDK S
Sbjct: 122 VDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGS 172
Score = 82.2 bits (194), Expect = 3e-16
Identities = 43/94 (45%), Positives = 58/94 (61%)
Frame = +2
Query: 251 HQDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIP 430
H D+ N LE L+P + GNVG +FT+GDL EVR+++ + KV APAR G +AP+ VV+P
Sbjct: 69 HADNTGNKEFLE-LMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVP 127
Query: 431 AHNTGPRSREDLFLPGSFYPXQXFKGTIEIINDV 532
NTG + F P + KGT+EII V
Sbjct: 128 PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPV 161
>02_01_0561 +
4120268-4120339,4121462-4121588,4121715-4121770,
4121841-4121912,4122017-4122128,4122247-4122284,
4122412-4122513,4122619-4122675,4122755-4122826,
4122992-4123093,4123210-4123405,4123988-4124094,
4124497-4124691,4124771-4124857,4124905-4124913,
4125599-4125703,4126067-4126164,4126250-4126328,
4126912-4127000,4127086-4127200
Length = 629
Score = 31.9 bits (69), Expect = 0.40
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Frame = +2
Query: 275 PALEK-LLPHIKGN---VGFVFTRGDLVEV--RDKLLENKVQAPARPGAIAPLSVVIPAH 436
PAL+K L H K VG + T GDL + + L+++KV P PGA+ +S + PA
Sbjct: 131 PALDKDALWHFKPEKLGVGDIITGGDLYAIVNENTLMQHKVALP--PGAMGKISYIAPA- 187
Query: 437 NTGPRSREDLFLPGSF 484
G S +D L F
Sbjct: 188 --GQYSLQDTVLELEF 201
>11_01_0676 -
5511755-5511831,5512857-5513052,5513462-5513577,
5513752-5514597,5515515-5515766,5522344-5525206
Length = 1449
Score = 30.7 bits (66), Expect = 0.92
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Frame = +2
Query: 263 LDNNPALEKL-LPH--IKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 418
L N AL+KL LPH ++GN+GF+ + + ++ D +L++ A P + LS
Sbjct: 396 LGNIAALQKLVLPHNNLEGNMGFLSSLSECRQLEDLILDHNSFVGALPDHLGNLS 450
>03_02_0600 -
9748382-9748933,9749805-9749840,9751164-9751218,
9751588-9751697,9751955-9752602
Length = 466
Score = 30.7 bits (66), Expect = 0.92
Identities = 15/38 (39%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Frame = +3
Query: 171 QQMQQIRISLXGSSIVLMGKNTMMRKAIK-TTWTTIQP 281
+Q+Q IR +L + +L+ KNT++ KAI+ T W ++P
Sbjct: 74 KQLQGIRDTLPETCRLLVAKNTLVGKAIEGTPWEALKP 111
>06_01_0090 - 724296-724532,724756-724938,725038-725088,725520-725639,
725738-725840,726106-726264,726728-726846,726891-727004,
727119-727277,727404-727451,728464-728640,729064-729116,
729549-729661,729793-729873,729966-730081,730786-730905,
732321-732429,732593-732770,732852-732920,733102-733233,
733657-733766,733843-734003,734081-734171,734258-734355,
734499-734619,734732-734892,734985-735090,735142-735236,
735828-735852,736008-736084,736196-736282,736372-736421,
736558-736639,736735-736795,737064-737116,737206-737395,
737472-737595,737860-737962,738064-738156,740344-740422,
740508-740584,740915-741043,742614-742731,742816-742913,
743457-743546,744998-745123,745238-745351,745488-745611,
745865-746019,746104-746201,746357-746600
Length = 1926
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/72 (26%), Positives = 35/72 (48%)
Frame = +2
Query: 167 LATDAADPYLAXWLQYRAHGKKHNDAQSHQDHLDNNPALEKLLPHIKGNVGFVFTRGDLV 346
+++D Y + ++ HGK D + + L NP L + P + N +FTRGD +
Sbjct: 1254 VSSDGRKEYYSKLVKADVHGK---DQEIYSIKLPGNPKLGEGKPENQ-NHAIIFTRGDAI 1309
Query: 347 EVRDKLLENKVQ 382
+ D +N ++
Sbjct: 1310 QTIDMNQDNYLE 1321
>11_01_0033 -
251730-251855,252068-252144,252228-252318,252644-252704,
252800-252858,252955-253045,253238-253406,253760-253787
Length = 233
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +3
Query: 24 KFHRSPYATLSRXGREDKATWXSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLX 203
K R+ TLS+ ++ I ++ Y ++ DN+ +Q+++ +R L
Sbjct: 3 KSKRNRPVTLSKTKKKPGLERKGKVVTDIKDAVEHYANAYVFTYDNMRNQKLKDLREQLK 62
Query: 204 GSS-IVLMGKNTM 239
SS I L GK M
Sbjct: 63 SSSRIFLAGKKVM 75
>11_01_0355 + 2679561-2680985,2681183-2682295
Length = 845
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +3
Query: 252 IKTTWTTIQPSRNCCHTSRATLASCSPAETSLRSVTNCWRTKSKL 386
I+ W ++ HTS TL+ SP+ +S+ T+C+ + +
Sbjct: 476 IQDLWNPMRNGSAPHHTSELTLSFSSPSPSSISGYTSCYNNNNMM 520
>01_05_0339 + 21135250-21135467,21136465-21137513,21137905-21138962
Length = 774
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +3
Query: 375 KSKLQLVLVPLPHCQSSFPPTTPGLGPEKTSFFQALSIPTKXSKG 509
K+ +QL +VP C S+ G GPE + +S ++ KG
Sbjct: 518 KNNMQLAIVPADGCASTLEQQYYGSGPEHDESSETISNRSQSEKG 562
>12_01_0032 -
266954-267079,267204-267245,267290-267366,267450-267540,
267864-267924,268021-268079,268176-268266,268481-268698,
268818-268824,269013-269148,270064-270307
Length = 383
Score = 28.7 bits (61), Expect = 3.7
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +3
Query: 36 SPYATLSRXGREDKATWXSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLXGSS- 212
S TLS+ ++ I ++ Y ++ DN+ +Q+++ +R L SS
Sbjct: 143 SSAVTLSKTKKKPGLERKGKVVTDIKDAVEHYANAYVFTYDNMRNQKLKDLREQLKSSSR 202
Query: 213 IVLMGKNTM 239
I L GK M
Sbjct: 203 IFLAGKKVM 211
>10_08_0911 - 21499196-21499236,21499368-21499488,21499665-21499789,
21500187-21500418,21500488-21500668,21501342-21501438,
21501641-21501779,21502024-21502351,21502890-21503137,
21503270-21503543,21504200-21504291,21504451-21504521,
21505091-21505181,21506526-21507380,21507482-21507594,
21508007-21508074,21508655-21508835,21509084-21509186,
21509273-21509379,21510046-21511584,21511661-21511771,
21511856-21511908,21511988-21512063,21512147-21512366,
21512477-21512901,21513193-21513372,21513503-21515474
Length = 2680
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -3
Query: 266 PGGLDGFAHHCVFSHE 219
P GL GF HH VFS E
Sbjct: 2213 PNGLQGFGHHFVFSKE 2228
>07_03_1762 -
29299328-29299437,29299782-29299871,29300487-29301291,
29301956-29303278
Length = 775
Score = 28.7 bits (61), Expect = 3.7
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = -1
Query: 526 VDDFNSPFEXLVGIERAWKKEVFSGPRPGVVGGNDD*QWGNGTRTSWSLDFVL-QQFVTD 350
V+ S FE + E A KE + G +WG+G+ +S D+V+ +Q + D
Sbjct: 268 VESDTSEFEFVTSDEEAADKEAPAAEPAKTKGKKGRKRWGSGSESSSDSDYVISEQELKD 327
Query: 349 LNEVS 335
L EVS
Sbjct: 328 L-EVS 331
>07_03_0196 +
14995224-14995489,14995859-14995877,14996703-14996839,
14998365-14998457,15001597-15001932,15003035-15003503
Length = 439
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/73 (27%), Positives = 29/73 (39%)
Frame = -1
Query: 493 VGIERAWKKEVFSGPRPGVVGGNDD*QWGNGTRTSWSLDFVLQQFVTDLNEVSAGEHEAN 314
VG ER W + G + G + GN +WS F +LN +S H+
Sbjct: 170 VGRER-WIWDSLQGKNEVLRGATRSGRKGNAE--NWSSQGDKDDFYNELNTISEARHKNL 226
Query: 313 VALDVWQQFLEGW 275
V L+ W + W
Sbjct: 227 VKLEGWCCHINAW 239
>09_04_0351 +
16904075-16904738,16906285-16906366,16906533-16906697,
16906811-16906929,16906930-16907156
Length = 418
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 390 LVLVPLPHCQSSFPPTTPGLG 452
+++VPLP C SSFP T G
Sbjct: 215 IIVVPLPACTSSFPAFTADYG 235
>06_01_0349 +
2529279-2530446,2532232-2533036,2533066-2533106,
2533219-2533424
Length = 739
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +3
Query: 228 KNTMMRKAIKTTWTTIQPSRNCCHTSRATLASCSPAETSLRSVTNCWRTKSKLQLVLVPL 407
K+ MM ++W +QP +R L S + LR+V WR+ ++LQ + PL
Sbjct: 392 KSCMMAAVQSSSWADLQPELLGLVLTR--LPSLAD-RVRLRAVCRPWRSNARLQPLPPPL 448
Query: 408 P 410
P
Sbjct: 449 P 449
>03_04_0243 + 19298293-19299117
Length = 274
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = -2
Query: 426 MTTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVNTKPTLPLMCGNSFS 283
+ TD+ + APG A A + S SRTS +P ++ PT P +S +
Sbjct: 172 VVTDSLSRAPGAAWAAAMAPTSWSRTS--APPASSSPTSPRRARSSLT 217
>10_08_0406 - 17688069-17690643,17691065-17691132
Length = 880
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +2
Query: 107 DHPTLGRVPKMFHRGCR*RGLATDAA-DPYLAXWLQYRAHGKKHNDAQSH 253
D P R ++FHR R RG A D A D W+ + ND Q H
Sbjct: 789 DDPAARRGARLFHR-LRRRGPAFDKAWDELARFWVHLVVYLAPSNDVQGH 837
>11_08_0037 +
27859867-27860382,27860471-27861440,27861647-27861991,
27862074-27862693
Length = 816
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 287 KLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAP 388
KLLP VGFV RG V+ +K+++ P
Sbjct: 464 KLLPLDANKVGFVNVRGPHVQAPEKIMDGDYTGP 497
>03_01_0410 - 3166651-3166815,3166901-3167218,3167305-3167652
Length = 276
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +2
Query: 335 GDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGP 448
GD V + NK A ARPG +A N GP
Sbjct: 237 GDAARVAGAEMRNKPGAAARPGGVAASMAAAARLNRGP 274
>02_04_0618 - 24428987-24429331,24429946-24430387,24433358-24433434
Length = 287
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/79 (21%), Positives = 33/79 (41%)
Frame = +3
Query: 183 QIRISLXGSSIVLMGKNTMMRKAIKTTWTTIQPSRNCCHTSRATLASCSPAETSLRSVTN 362
Q+ + +S L G + M A+ + + I C +R + SCS + +++
Sbjct: 100 QVAARVSAASAPLAGDSPMFSIAVPRSASGISSFAGCYCFARQAITSCSLRLRNNNILSD 159
Query: 363 CWRTKSKLQLVLVPLPHCQ 419
C R +S +P+ Q
Sbjct: 160 CSRRESGASATAIPMEEQQ 178
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,218,815
Number of Sequences: 37544
Number of extensions: 348732
Number of successful extensions: 936
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 936
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1423789920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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