Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0346
         (598 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    26   0.80 
AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein p...    25   2.5  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    24   4.3  
AY330174-1|AAQ16280.1|  178|Anopheles gambiae odorant-binding pr...    23   9.9  

>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 26.2 bits (55), Expect = 0.80
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +2

Query: 164 GLATDAADPYLAXWLQYRAHGKKHNDAQSHQDHLDNNP 277
           G ATD  +  LA   Q + H  +H   Q HQ    ++P
Sbjct: 293 GSATDNNNYILAQQQQQQHHHHQHQPQQQHQQQYHSHP 330


>AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein
           protein.
          Length = 357

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = -3

Query: 365 TVCHGPQRGLRG*TRSQRCP*CVATVSRGLDCCPGGLDGFAH 240
           T+C G   G+    ++Q C  C A V  GL+C     + FA+
Sbjct: 12  TLC-GEVTGVSYRGQAQTCRNCAAPVHHGLNCVQNRQNRFAN 52


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = -1

Query: 304 DVWQQFLEGWIVVQVVLMALRIIVFFPMST 215
           D++ Q  E W  V +V+  L++ +FF ++T
Sbjct: 461 DLYIQTREDWKYVAMVIDRLQLYIFFIVTT 490


>AY330174-1|AAQ16280.1|  178|Anopheles gambiae odorant-binding
           protein AgamOBP47 protein.
          Length = 178

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 240 MRKAIKTTWTTIQPSRNCCHT 302
           +R  I TT +T+Q +  CC T
Sbjct: 6   VRALISTTISTLQNAAECCVT 26


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 595,185
Number of Sequences: 2352
Number of extensions: 11316
Number of successful extensions: 41
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)