Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0346
         (598 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical pr...   128   2e-30
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr...    29   1.9  
Z81449-3|CAB03761.1|  300|Caenorhabditis elegans Hypothetical pr...    29   1.9  
U41264-4|AAA82424.1|  220|Caenorhabditis elegans Hypothetical pr...    29   3.3  
U53154-2|AAC25856.1|  358|Caenorhabditis elegans Hypothetical pr...    28   4.4  
AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical ...    28   4.4  
AL117205-4|CAB55162.1|  441|Caenorhabditis elegans Hypothetical ...    28   5.8  
Z81117-4|CAB03319.1|  249|Caenorhabditis elegans Hypothetical pr...    27   7.7  
Z49889-1|CAA90066.2|  591|Caenorhabditis elegans Hypothetical pr...    27   7.7  

>Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical
           protein F25H2.10 protein.
          Length = 312

 Score =  128 bits (310), Expect = 2e-30
 Identities = 63/164 (38%), Positives = 91/164 (55%)
 Frame = +3

Query: 66  REDKATWXSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLXGSSIVLMGKNTMMR 245
           RED++TW +NYF K+++L +EYPKC +VG DNVGS+QMQ+IR ++ G + +LMGKNTM+R
Sbjct: 3   REDRSTWKANYFTKLVELFEEYPKCLLVGVDNVGSKQMQEIRQAMRGHAEILMGKNTMIR 62

Query: 246 KAIKTTWTTIQPSRNCCHTSRATLASCSPAETSLRSVTNCWRTKSKLQLVLVPLPHCQSS 425
           KA++                   +      E      +     +         +  C   
Sbjct: 63  KALRGHLGKNPSLEKLLPHIVENVGFVFTKEDLGEIRSKLLENRKGAPAKAGAIAPCDVK 122

Query: 426 FPPTTPGLGPEKTSFFQALSIPTKXSKGLLKSSTMXHILXXGDK 557
            PP   G+GPEKTSFFQAL IPTK ++G ++     H++  GDK
Sbjct: 123 LPPQNTGMGPEKTSFFQALQIPTKIARGTIEILNDVHLIKEGDK 166



 Score =  105 bits (251), Expect = 3e-23
 Identities = 55/106 (51%), Positives = 68/106 (64%)
 Frame = +2

Query: 224 GKKHNDAQSHQDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGA 403
           GK     ++ + HL  NP+LEKLLPHI  NVGFVFT+ DL E+R KLLEN+  APA+ GA
Sbjct: 56  GKNTMIRKALRGHLGKNPSLEKLLPHIVENVGFVFTKEDLGEIRSKLLENRKGAPAKAGA 115

Query: 404 IAPLSVVIPAHNTGPRSREDLFLPGSFYPXQXFKGTIEIINDVXHL 541
           IAP  V +P  NTG    +  F      P +  +GTIEI+NDV HL
Sbjct: 116 IAPCDVKLPPQNTGMGPEKTSFFQALQIPTKIARGTIEILNDV-HL 160


>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
           protein F36F2.3a protein.
          Length = 1128

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 23/92 (25%), Positives = 36/92 (39%), Gaps = 2/92 (2%)
 Frame = +3

Query: 180 QQIRISLXGSSIVLMGKNTMMRKAIKTTWTTIQPSRNCCHTSRATLASCSPAET--SLRS 353
           +QIRI + G       ++ +    I    T +Q        S  T  S  P+    S+  
Sbjct: 326 EQIRIRI-GLKAPSSSQSQITPSGISPGSTLVQQQTTLTSVSSGTSLSAQPSNVNPSIPG 384

Query: 354 VTNCWRTKSKLQLVLVPLPHCQSSFPPTTPGL 449
           +    +  S +Q V +P P  +   PP  PGL
Sbjct: 385 IPLASQVPSMVQDVSLPPPQLRQELPPGIPGL 416


>Z81449-3|CAB03761.1|  300|Caenorhabditis elegans Hypothetical
           protein C46F11.3 protein.
          Length = 300

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -3

Query: 479 SLEERGLLWTEARCCGRE*RLTMGQWHQDELELGL 375
           ++ +R +LW +   C R   L+   W Q +LELG+
Sbjct: 139 AVRKRPILWDQRLICHRNSNLSRRAWDQLDLELGI 173


>U41264-4|AAA82424.1|  220|Caenorhabditis elegans Hypothetical
           protein F10E7.5 protein.
          Length = 220

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = +2

Query: 281 LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIP 430
           L K    +KG  G +FT     EV  +  E   +  AR G +A  +VV+P
Sbjct: 90  LHKASAILKGQCGLMFTNMSKKEVEAEFSEASEEDYARVGDVATETVVLP 139


>U53154-2|AAC25856.1|  358|Caenorhabditis elegans Hypothetical
           protein C33G8.12 protein.
          Length = 358

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
 Frame = +3

Query: 15  LVLKFHRSPYATLSRXGREDKATWXSNYFVKIIQLLD---EYPKCFIVGADNVGSQQMQQ 185
           L+ K   S ++ +SR  +EDK +  SN+++K   L++   +Y   +    + +GS    Q
Sbjct: 156 LLWKLGESIFSDVSRLSKEDKNSMISNFYIKWQLLMEPAIDYSAQYEQFKNYIGSNAYYQ 215

Query: 186 IRISLXGSSI 215
                 GSS+
Sbjct: 216 KCAYFYGSSM 225


>AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical
           protein Y46B2A.3 protein.
          Length = 1145

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -2

Query: 423 TTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVNTKPT 313
           TT      P  AG WT+ +N ++R  TR P    +PT
Sbjct: 192 TTRGFTQRPTAAG-WTIRANGITRGQTRVPGTTREPT 227


>AL117205-4|CAB55162.1|  441|Caenorhabditis elegans Hypothetical
           protein Y116A8A.4 protein.
          Length = 441

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 21/70 (30%), Positives = 29/70 (41%)
 Frame = +3

Query: 255 KTTWTTIQPSRNCCHTSRATLASCSPAETSLRSVTNCWRTKSKLQLVLVPLPHCQSSFPP 434
           K T TT +P+      S  +    +  ET++   ++   T  K      P P   SS P 
Sbjct: 286 KPTLTT-EPTPVTTEKSTVSTTISTSLETTIMQASSASPTSIKPSTTTEPSPLQASSKPA 344

Query: 435 TTPGLGPEKT 464
           T P L PE T
Sbjct: 345 TEPLLRPEST 354


>Z81117-4|CAB03319.1|  249|Caenorhabditis elegans Hypothetical
           protein T06E6.10 protein.
          Length = 249

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 17/71 (23%), Positives = 25/71 (35%), Gaps = 4/71 (5%)
 Frame = +3

Query: 261 TWTTIQPSRNCCHTSRATLASCSPAETSLRSVTNCWRTKSKLQLVLVPLPHCQSSF---- 428
           T T  +    C H +  T   CSP +        C+ T         P+  C++      
Sbjct: 125 TMTGCELKPTCIHVNACTTTKCSPGKKCALHTVQCFTTPCD------PVAKCETPLNFLS 178

Query: 429 PPTTPGLGPEK 461
            P  PG GP +
Sbjct: 179 EPFNPGCGPNE 189


>Z49889-1|CAA90066.2|  591|Caenorhabditis elegans Hypothetical
           protein T06H11.1a protein.
          Length = 591

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 16/73 (21%), Positives = 31/73 (42%)
 Frame = -2

Query: 477 PGRKRSSLDRGPVLWAGMTTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVNTKPTLPLMC 298
           P + R  +D    LW G     G +    +   ++FSN+ +R  ++   V  +PT+ +  
Sbjct: 60  PEQLRFIIDENQELWTGSQPPTGFLELCASPVSSVFSNADARRMSQRKLVLRRPTISIQE 119

Query: 297 GNSFSRAGLLSRW 259
                   + +RW
Sbjct: 120 DGKIIIDHVTARW 132


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,022,447
Number of Sequences: 27780
Number of extensions: 266569
Number of successful extensions: 755
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 755
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)