Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0345
(548 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 155 5e-37
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 143 3e-33
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 139 4e-32
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 137 2e-31
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 132 4e-30
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 121 1e-26
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 119 4e-26
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 101 1e-20
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 92 9e-18
UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2... 92 9e-18
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 84 2e-15
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 75 1e-12
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 74 3e-12
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 73 4e-12
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 72 8e-12
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 72 8e-12
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 72 1e-11
UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 69 5e-11
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 66 5e-10
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 65 9e-10
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 65 1e-09
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 64 2e-09
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 63 4e-09
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 63 4e-09
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 62 1e-08
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 61 1e-08
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 58 2e-07
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 52 7e-06
UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n... 52 1e-05
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 52 1e-05
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 46 6e-04
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 46 8e-04
UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3; ... 44 0.002
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 43 0.005
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 41 0.016
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 38 0.12
UniRef50_UPI0000DA3DCA Cluster: PREDICTED: similar to 40S riboso... 37 0.27
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 35 1.1
UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n... 35 1.4
UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;... 33 3.3
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 33 5.8
UniRef50_A2A4F1 Cluster: Reproductive homeobox 7; n=3; Mus muscu... 32 7.6
UniRef50_A4QUU0 Cluster: Putative uncharacterized protein; n=2; ... 32 7.6
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 155 bits (377), Expect = 5e-37
Identities = 74/97 (76%), Positives = 78/97 (80%)
Frame = -3
Query: 546 NEVLKIMPXQKQTFPDXXHVFKAFVAIXDNXGHIGLGVKCXKXVAXAIXGAIXLAKLSVX 367
+EVLKIMP QKQT FKAFVAI D GH+GLGVKC K VA AI GAI LAKLS+
Sbjct: 104 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIV 163
Query: 366 PVRRGYWGNKXGKPHTVPCKVTGKCGSVXVRLIPAPR 256
PVRRGYWGNK GKPHTVPCKVTG+CGSV VRLIPAPR
Sbjct: 164 PVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPR 200
Score = 91.9 bits (218), Expect = 9e-18
Identities = 44/71 (61%), Positives = 47/71 (66%)
Frame = -2
Query: 262 PSCTGIVSAPVPKKLLQMAGVQDCYTSARGSTGXLGNFXXXXXXXXXXXXXYLTPDLWRD 83
P TGIVSAPVPKKLL MAG+ DCYTSARG T LGNF YLTPDLW++
Sbjct: 199 PRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKE 258
Query: 82 IPLTKSPYSEF 50
TKSPY EF
Sbjct: 259 TVFTKSPYQEF 269
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 143 bits (346), Expect = 3e-33
Identities = 69/103 (66%), Positives = 75/103 (72%)
Frame = -3
Query: 546 NEVLKIMPXQKQTFPDXXHVFKAFVAIXDNXGHIGLGVKCXKXVAXAIXGAIXLAKLSVX 367
+EVLKIMP QKQT FKAFV I D GH+GL VKC K VA AI GAI LAKLS+
Sbjct: 44 DEVLKIMPVQKQTCAGQHTRFKAFVPIGDYNGHVGLSVKCSKEVATAIRGAIILAKLSIV 103
Query: 366 PVRRGYWGNKXGKPHTVPCKVTGKCGSVXVRLIPAPRVLVLCL 238
PV RGYWGNK GKPHTVPCKVTG+C SV V LIPAP ++ L
Sbjct: 104 PVCRGYWGNKIGKPHTVPCKVTGRCSSVLVHLIPAPEQVMAAL 146
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 139 bits (336), Expect = 4e-32
Identities = 68/97 (70%), Positives = 73/97 (75%)
Frame = -3
Query: 546 NEVLKIMPXQKQTFPDXXHVFKAFVAIXDNXGHIGLGVKCXKXVAXAIXGAIXLAKLSVX 367
+EVLKIMP QKQT F AFVAI D GH GLGVKC K VA AI AI LAKLS+
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLGVKCSKEVATAIREAIILAKLSIV 107
Query: 366 PVRRGYWGNKXGKPHTVPCKVTGKCGSVXVRLIPAPR 256
P+R+GYWGNK GKP+TVPCKVTG CGSV V LIPAPR
Sbjct: 108 PLRQGYWGNKIGKPNTVPCKVTGHCGSVLVCLIPAPR 144
Score = 87.8 bits (208), Expect = 1e-16
Identities = 42/71 (59%), Positives = 46/71 (64%)
Frame = -2
Query: 262 PSCTGIVSAPVPKKLLQMAGVQDCYTSARGSTGXLGNFXXXXXXXXXXXXXYLTPDLWRD 83
P TG+VSAPVPKKLL MAG+ DCYTSAR T LGNF YLTPDLW++
Sbjct: 143 PRGTGMVSAPVPKKLLMMAGIDDCYTSARDCTASLGNFAKATFDTISKTYTYLTPDLWKE 202
Query: 82 IPLTKSPYSEF 50
TKSPY EF
Sbjct: 203 TVFTKSPYEEF 213
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 137 bits (331), Expect = 2e-31
Identities = 61/97 (62%), Positives = 73/97 (75%)
Frame = -3
Query: 546 NEVLKIMPXQKQTFPDXXHVFKAFVAIXDNXGHIGLGVKCXKXVAXAIXGAIXLAKLSVX 367
+EV+K++P QKQT FKAFV I D+ GH+GLG+KC K VA AI GAI + KLS+
Sbjct: 77 DEVMKVVPVQKQTRAGQRTRFKAFVVIGDSDGHVGLGIKCAKEVATAIRGAIIMGKLSIM 136
Query: 366 PVRRGYWGNKXGKPHTVPCKVTGKCGSVXVRLIPAPR 256
P+RRGYWG G PHTVP KV+GKCGSV VRL+PAPR
Sbjct: 137 PIRRGYWGTALGDPHTVPVKVSGKCGSVTVRLVPAPR 173
Score = 71.3 bits (167), Expect = 1e-11
Identities = 31/71 (43%), Positives = 43/71 (60%)
Frame = -2
Query: 262 PSCTGIVSAPVPKKLLQMAGVQDCYTSARGSTGXLGNFXXXXXXXXXXXXXYLTPDLWRD 83
P G+V+APV K+ LQ+AG++DCYT +RGST LGNF LTP+LW +
Sbjct: 172 PRGAGLVAAPVTKRFLQLAGIEDCYTQSRGSTKTLGNFVKAAFAAASLTYGILTPNLWAE 231
Query: 82 IPLTKSPYSEF 50
P ++P E+
Sbjct: 232 RPFGQTPIEEY 242
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 132 bits (320), Expect = 4e-30
Identities = 62/97 (63%), Positives = 73/97 (75%)
Frame = -3
Query: 546 NEVLKIMPXQKQTFPDXXHVFKAFVAIXDNXGHIGLGVKCXKXVAXAIXGAIXLAKLSVX 367
+EV+KI P QKQT FKAFV + D GHIGLGVK K VA +I G++ LAKL++
Sbjct: 94 DEVMKICPVQKQTTAGQRMRFKAFVVVGDCNGHIGLGVKACKEVAHSIQGSMILAKLNIV 153
Query: 366 PVRRGYWGNKXGKPHTVPCKVTGKCGSVXVRLIPAPR 256
PVRRGYWG+K G+PHT+P KV GKCGSV VRLIPAPR
Sbjct: 154 PVRRGYWGSKLGEPHTIPTKVHGKCGSVHVRLIPAPR 190
Score = 56.0 bits (129), Expect = 5e-07
Identities = 29/71 (40%), Positives = 36/71 (50%)
Frame = -2
Query: 262 PSCTGIVSAPVPKKLLQMAGVQDCYTSARGSTGXLGNFXXXXXXXXXXXXXYLTPDLWRD 83
P GIV++ KK+L MAG+ D YT +RG T LGN +LTPDLW +
Sbjct: 189 PRGAGIVASGTVKKVLAMAGLHDVYTCSRGHTRTLGNSVKATYEALKNSYGFLTPDLWAE 248
Query: 82 IPLTKSPYSEF 50
K P EF
Sbjct: 249 TRFAKPPAQEF 259
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 121 bits (291), Expect = 1e-26
Identities = 56/97 (57%), Positives = 67/97 (69%)
Frame = -3
Query: 546 NEVLKIMPXQKQTFPDXXHVFKAFVAIXDNXGHIGLGVKCXKXVAXAIXGAIXLAKLSVX 367
+EV+ I P QKQT FKA V + D+ GH+GLG+K K VA AI I +AKLSV
Sbjct: 78 DEVMNIKPVQKQTRAGQRTRFKAVVVVGDSNGHVGLGIKTAKEVAGAIRAGIIIAKLSVI 137
Query: 366 PVRRGYWGNKXGKPHTVPCKVTGKCGSVXVRLIPAPR 256
P+RRGYWG G+PH++ K TGKCGSV VRLIPAPR
Sbjct: 138 PIRRGYWGTNLGQPHSLATKTTGKCGSVTVRLIPAPR 174
Score = 57.6 bits (133), Expect = 2e-07
Identities = 29/67 (43%), Positives = 38/67 (56%)
Frame = -2
Query: 262 PSCTGIVSAPVPKKLLQMAGVQDCYTSARGSTGXLGNFXXXXXXXXXXXXXYLTPDLWRD 83
P +GIV++P KKLLQ+AGV+D YT + G T L N +LTP+LW +
Sbjct: 173 PRGSGIVASPAVKKLLQLAGVEDVYTQSNGKTRTLENTLKAAFVAIGNTYGFLTPNLWAE 232
Query: 82 IPLTKSP 62
PL SP
Sbjct: 233 QPLPVSP 239
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 119 bits (287), Expect = 4e-26
Identities = 55/77 (71%), Positives = 61/77 (79%)
Frame = -3
Query: 486 FKAFVAIXDNXGHIGLGVKCXKXVAXAIXGAIXLAKLSVXPVRRGYWGNKXGKPHTVPCK 307
FKAFVAI D+ G +G GVKC K A AI GA+ LAKLS+ PV RGYWGN+ KPHTVP K
Sbjct: 64 FKAFVAIGDDNGQVGPGVKCSKEAATAIRGAVILAKLSILPVPRGYWGNEIRKPHTVPGK 123
Query: 306 VTGKCGSVXVRLIPAPR 256
VTG+CGSV VRLIPAPR
Sbjct: 124 VTGRCGSVLVRLIPAPR 140
Score = 57.6 bits (133), Expect = 2e-07
Identities = 26/36 (72%), Positives = 27/36 (75%)
Frame = -2
Query: 262 PSCTGIVSAPVPKKLLQMAGVQDCYTSARGSTGXLG 155
P TG VSAPVPKKLL MAG+ DCYTSARG T G
Sbjct: 139 PRGTGFVSAPVPKKLLMMAGIDDCYTSARGHTATWG 174
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 101 bits (242), Expect = 1e-20
Identities = 49/96 (51%), Positives = 58/96 (60%)
Frame = -3
Query: 543 EVLKIMPXQKQTFPDXXHVFKAFVAIXDNXGHIGLGVKCXKXVAXAIXGAIXLAKLSVXP 364
EVL I QKQT KA V + D GH+G+G K K A AI GAI AK ++ P
Sbjct: 66 EVLSIKSVQKQTRAGQKTRIKAVVVVGDRKGHVGIGTKASKEAASAIRGAIARAKCAIRP 125
Query: 363 VRRGYWGNKXGKPHTVPCKVTGKCGSVXVRLIPAPR 256
VR G W GKPHTV CK +GKCG+ V++IPAPR
Sbjct: 126 VRLGLWDGAQGKPHTVSCKGSGKCGTSVVQVIPAPR 161
Score = 52.8 bits (121), Expect = 5e-06
Identities = 25/71 (35%), Positives = 36/71 (50%)
Frame = -2
Query: 262 PSCTGIVSAPVPKKLLQMAGVQDCYTSARGSTGXLGNFXXXXXXXXXXXXXYLTPDLWRD 83
P TGI+S V KK+ ++AG++D YT + G+T NF + PD W +
Sbjct: 160 PRGTGIISGSVNKKIFELAGIKDLYTLSFGATSTTENFAKASIAALEATSSMILPDQWEE 219
Query: 82 IPLTKSPYSEF 50
P T +P EF
Sbjct: 220 KPRTLNPLLEF 230
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 91.9 bits (218), Expect = 9e-18
Identities = 44/71 (61%), Positives = 47/71 (66%)
Frame = -2
Query: 262 PSCTGIVSAPVPKKLLQMAGVQDCYTSARGSTGXLGNFXXXXXXXXXXXXXYLTPDLWRD 83
P TGIVSAPVPKKLL MAG+ DCYTSARG T LGNF YLTPDLW++
Sbjct: 141 PRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKE 200
Query: 82 IPLTKSPYSEF 50
TKSPY EF
Sbjct: 201 TVFTKSPYQEF 211
Score = 37.9 bits (84), Expect = 0.15
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -3
Query: 309 KVTGKCGSVXVRLIPAPR 256
KVTG+CGSV VRLIPAPR
Sbjct: 125 KVTGRCGSVLVRLIPAPR 142
>UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2
protein - Homo sapiens (Human)
Length = 97
Score = 91.9 bits (218), Expect = 9e-18
Identities = 44/71 (61%), Positives = 47/71 (66%)
Frame = -2
Query: 262 PSCTGIVSAPVPKKLLQMAGVQDCYTSARGSTGXLGNFXXXXXXXXXXXXXYLTPDLWRD 83
P TGIVSAPVPKKLL MAG+ DCYTSARG T LGNF YLTPDLW++
Sbjct: 3 PRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKE 62
Query: 82 IPLTKSPYSEF 50
TKSPY EF
Sbjct: 63 TVFTKSPYQEF 73
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 84.2 bits (199), Expect = 2e-15
Identities = 43/73 (58%), Positives = 46/73 (63%)
Frame = -2
Query: 268 SCPSCTGIVSAPVPKKLLQMAGVQDCYTSARGSTGXLGNFXXXXXXXXXXXXXYLTPDLW 89
S P TGIVSAPVPKKLL MA + DCYT ARG T LGNF YLTPDLW
Sbjct: 139 SAPRGTGIVSAPVPKKLLMMA-IDDCYTLARGCTATLGNFAKATFDAISKIYSYLTPDLW 197
Query: 88 RDIPLTKSPYSEF 50
++ TKSPY EF
Sbjct: 198 KETVFTKSPYQEF 210
Score = 33.1 bits (72), Expect = 4.4
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = -3
Query: 309 KVTGKCGSVXVRLIPAPR 256
KVTG+CGSV VRL APR
Sbjct: 125 KVTGRCGSVLVRLFSAPR 142
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 74.9 bits (176), Expect = 1e-12
Identities = 44/90 (48%), Positives = 53/90 (58%)
Frame = -3
Query: 525 PXQKQTFPDXXHVFKAFVAIXDNXGHIGLGVKCXKXVAXAIXGAIXLAKLSVXPVRRGYW 346
P KQT D FKA V + + GH+ LG+K VA I LAKLS+ PV
Sbjct: 95 PLIKQTCTDQQTRFKASVTVG-SYGHVSLGIKYSMEVA------IILAKLSIIPVETAT- 146
Query: 345 GNKXGKPHTVPCKVTGKCGSVXVRLIPAPR 256
G K +PH VPC+VTG+CGS+ V LIPAPR
Sbjct: 147 GGKRLEPHMVPCRVTGRCGSLLVHLIPAPR 176
Score = 51.6 bits (118), Expect = 1e-05
Identities = 33/73 (45%), Positives = 38/73 (52%)
Frame = -2
Query: 262 PSCTGIVSAPVPKKLLQMAGVQDCYTSARGSTGXLGNFXXXXXXXXXXXXXYLTPDLWRD 83
P TG VSAPVPK LL MAG+ D +SA G T LGNF YL PDL ++
Sbjct: 175 PRGTGTVSAPVPK-LLMMAGIDDS-SSASGCTATLGNFTKAIFDTISKTHSYLIPDLQKE 232
Query: 82 IPLTKSPYSEFKV 44
KS Y +V
Sbjct: 233 TVFAKSLYQNSRV 245
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 73.7 bits (173), Expect = 3e-12
Identities = 42/114 (36%), Positives = 62/114 (54%), Gaps = 2/114 (1%)
Frame = -3
Query: 543 EVLKIMPXQKQTFPDXXHVFKAFVAIXDNXGHIGLGVKCXKXVAXAIXGAIXLAKLSVXP 364
EV+ I QKQT +K V + + G++ +G K + AI AI AK+++ P
Sbjct: 57 EVVDIKVVQKQTDAGEISRYKVLVIMGNMDGYVSIGTGKAKQLRVAIQKAIRDAKMNIIP 116
Query: 363 VRRGY--WGNKXGKPHTVPCKVTGKCGSVXVRLIPAPRVLVLCLRQFLRSFFRW 208
VRRG W G+PH++P KV GK GSV V L+PAP+ L + L++ +
Sbjct: 117 VRRGCGSWQCTCGEPHSLPFKVVGKAGSVEVDLLPAPKGTGLVVGSVLKTLLTY 170
Score = 33.1 bits (72), Expect = 4.4
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -2
Query: 262 PSCTGIVSAPVPKKLLQMAGVQDCYTSARGSTGXLGNF 149
P TG+V V K LL AG++D +++ +G T NF
Sbjct: 153 PKGTGLVVGSVLKTLLTYAGIKDAWSTTKGETRTTENF 190
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 72.9 bits (171), Expect = 4e-12
Identities = 34/76 (44%), Positives = 46/76 (60%)
Frame = -3
Query: 483 KAFVAIXDNXGHIGLGVKCXKXVAXAIXGAIXLAKLSVXPVRRGYWGNKXGKPHTVPCKV 304
K V + D GH+GLGVK I A+ AKL++ +RRGYW + GKP+T+ K
Sbjct: 131 KVAVLVGDLDGHVGLGVKSSMDSKAGIKAALRKAKLAITKIRRGYWEIEEGKPNTIKYKT 190
Query: 303 TGKCGSVXVRLIPAPR 256
+GK GSV V + PAP+
Sbjct: 191 SGKAGSVVVCIKPAPK 206
Score = 36.3 bits (80), Expect = 0.47
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = -2
Query: 262 PSCTGIVSAPVPKKLLQMAGVQDCYTSARGSTGXLGNFXXXXXXXXXXXXXYLTPDLW 89
P TGIV++ +L+++G++DC+T + G T N ++TPD W
Sbjct: 205 PKGTGIVASKFQLNVLKISGIRDCFTKSFGRTKSSFNTIKATFNALSSSYKFVTPDYW 262
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 72.1 bits (169), Expect = 8e-12
Identities = 35/71 (49%), Positives = 41/71 (57%)
Frame = -2
Query: 262 PSCTGIVSAPVPKKLLQMAGVQDCYTSARGSTGXLGNFXXXXXXXXXXXXXYLTPDLWRD 83
P I+SAPVPKKLL +A + DCYTSARG T L NF YLTP+LW+
Sbjct: 180 PPTRNIISAPVPKKLLLLANIDDCYTSARGCTATLDNFDKATFNAISNTYSYLTPNLWKG 239
Query: 82 IPLTKSPYSEF 50
+ KS Y EF
Sbjct: 240 LVFAKSTYLEF 250
Score = 47.6 bits (108), Expect = 2e-04
Identities = 37/96 (38%), Positives = 47/96 (48%)
Frame = -3
Query: 534 KIMPXQKQTFPDXXHVFKAFVAIXDNXGHIGLGVKCXKXVAXAIXGAIXLAKLSVXPVRR 355
+IMP Q QT+ FK FV+I D H+ L KC K A AI V +
Sbjct: 104 EIMPVQTQTWLPS-RPFKDFVSIRDYSSHVDLDDKCSKKTATAIV-----------LVWK 151
Query: 354 GYWGNKXGKPHTVPCKVTGKCGSVXVRLIPAPRVLV 247
G + G TV CKVTG+C SV + LIP R ++
Sbjct: 152 GTRETRLGSL-TVSCKVTGQCVSVLICLIPPTRNII 186
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 72.1 bits (169), Expect = 8e-12
Identities = 48/101 (47%), Positives = 57/101 (56%)
Frame = -3
Query: 546 NEVLKIMPXQKQTFPDXXHVFKAFVAIXDNXGHIGLGVKCXKXVAXAIXGAIXLAKLSVX 367
+EVLK +P QK T +KA D GH+ G+ VA I I L KL +
Sbjct: 92 DEVLKSLPEQKGT--RVGQYYKA----GDYNGHVITGLD---EVANTIQRVIILTKLPIV 142
Query: 366 PVRRGYWGNKXGKPHTVPCKVTGKCGSVXVRLIPAPRVLVL 244
PV RGY G+K KPHTV CKVTG GSV + LIPAPR V+
Sbjct: 143 PVWRGYCGSKTSKPHTVLCKVTGH-GSVSLHLIPAPRDTVI 182
Score = 49.6 bits (113), Expect = 5e-05
Identities = 26/45 (57%), Positives = 29/45 (64%)
Frame = -2
Query: 307 GHRQVWFRXSPADSCPSCTGIVSAPVPKKLLQMAGVQDCYTSARG 173
GH V PA P T I SAP+PKKLL MAG+ DC+TSARG
Sbjct: 165 GHGSVSLHLIPA---PRDTVISSAPMPKKLLMMAGINDCHTSARG 206
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 71.7 bits (168), Expect = 1e-11
Identities = 42/104 (40%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
Frame = -3
Query: 543 EVLKIMPXQKQTFPDXXHVFKAFVAIXDNXGHIGLGVKCXKXVAXAIXGAIXLAKLSVXP 364
EVL I + T F+ A+ + G++GLG+ K V AI AI AKL++
Sbjct: 64 EVLDIALTVRMTDSGRRVRFRVLAAVGNRDGYVGLGIGHGKEVGIAIRKAINYAKLNIIE 123
Query: 363 VRRGY--WGNKXGKPHTVPCKVTGKCGSVXVRLIPAPRVLVLCL 238
++RG W + +PH+VP V GK GSV VRLIP PR L L +
Sbjct: 124 IKRGCGSWECRCRRPHSVPFAVEGKEGSVRVRLIPGPRGLGLVI 167
Score = 33.1 bits (72), Expect = 4.4
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -2
Query: 262 PSCTGIVSAPVPKKLLQMAGVQDCYTSARGSTGXLGNF 149
P G+V V KK+L++AGVQD ++ G T NF
Sbjct: 160 PRGLGLVIGDVGKKILRLAGVQDVWSQTFGETRTTVNF 197
>UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 69.3 bits (162), Expect = 5e-11
Identities = 39/93 (41%), Positives = 52/93 (55%)
Frame = +1
Query: 268 NQPDXYGTTLAGDLARDGVWLSXLVTPVTSSDWXN*QLXKXNSASNGXGDXLXALHTQTN 447
NQ + GTTL L GV L+ + TPVTSSDW N QL ++ S+G + L L+TQT+
Sbjct: 87 NQSNGNGTTLTRGLGSQGVRLTQVGTPVTSSDWDNGQLGDDDTGSDGTSNFLSGLNTQTD 146
Query: 448 MTXVVXNGNKCLENVXXVRERLFLXRHDLKNLI 546
+T V N + LE+ L L R D+ N I
Sbjct: 147 VTVGVTNDDDSLESGSLTSSGLLLDRLDVHNFI 179
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 66.1 bits (154), Expect = 5e-10
Identities = 40/103 (38%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Frame = -3
Query: 546 NEVLKIMPXQKQTFPDXXHVFKAFVAIXDNXGHIGLGVKCXKXVAXAIXGAIXLAKLSVX 367
+EV+ + QK T FKA VA + G++G+G K + AI A A L+V
Sbjct: 89 SEVVDVGIIQKMTSNGQSTRFKAIVATGNENGYLGIGQGKSKQMRIAIEKATNAAYLNVN 148
Query: 366 PVRRGY--WGNKXGKPHTVPCKVTGKCGSVXVRLIPAPRVLVL 244
P++ G W + + H+VP KV GK GSV + +IPAPR L L
Sbjct: 149 PIKMGCGSWECRCDQKHSVPFKVKGKGGSVTIEIIPAPRGLGL 191
Score = 33.9 bits (74), Expect = 2.5
Identities = 14/32 (43%), Positives = 24/32 (75%)
Frame = -2
Query: 262 PSCTGIVSAPVPKKLLQMAGVQDCYTSARGST 167
P G+V+ K+LL++AG++D +T+A+GST
Sbjct: 186 PRGLGLVAGGKIKRLLELAGLKDAWTTAKGST 217
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 65.3 bits (152), Expect = 9e-10
Identities = 34/79 (43%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Frame = -3
Query: 486 FKAFVAIXDNXGHIGLGVKCXKXVAXAIXGAIXLAKLSVXPVRRGY--WGNKXGKPHTVP 313
++A V + + G++G+G+ K V AI AI AKLS+ VR G W G PH++P
Sbjct: 79 YRATVVVGNKNGYVGVGMGKSKEVGPAIRKAIAHAKLSLIKVRVGCGSWECGCGSPHSIP 138
Query: 312 CKVTGKCGSVXVRLIPAPR 256
G CGSV V L+PAPR
Sbjct: 139 FTAKGACGSVKVELLPAPR 157
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 64.9 bits (151), Expect = 1e-09
Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 2/114 (1%)
Frame = -3
Query: 546 NEVLKIMPXQKQTFPDXXHVFKAFVAIXDNXGHIGLGVKCXKXVAXAIXGAIXLAKLSVX 367
+EV+ I Q+ T + + + G++G+G K A AI AI AKL++
Sbjct: 48 DEVINIERAQRMTDSGRRMNYSITAVVGNGNGYVGVGRGKAKEAAPAIKKAIDNAKLNII 107
Query: 366 PVRRGY--WGNKXGKPHTVPCKVTGKCGSVXVRLIPAPRVLVLCLRQFLRSFFR 211
++RG W GKPHT+P V GK GSV V L PAP+ + L + ++ R
Sbjct: 108 EIKRGCGSWECGCGKPHTLPFLVNGKSGSVSVTLKPAPQGVGLAVGDVVKVILR 161
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 64.5 bits (150), Expect = 2e-09
Identities = 42/103 (40%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Frame = -3
Query: 546 NEVLKIMPXQKQTFPDXXHVFKAFVAIXDNXGHIGLGVKCXKXVAXAIXGAIXLAKLSVX 367
+EVL I Q+ T F+ VA+ + G IG V AI AI +AKL++
Sbjct: 50 DEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGLIGYAEGRDDQVGGAIQKAIDIAKLNII 109
Query: 366 PVRRGY--WGNKXGKPHTVPCKVTGKCGSVXVRLIPAPRVLVL 244
V RG W G+PHTV + GK GSV V L PAPR L L
Sbjct: 110 DVSRGCGSWECGCGRPHTVALRTEGKAGSVEVELQPAPRGLGL 152
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 63.3 bits (147), Expect = 4e-09
Identities = 40/94 (42%), Positives = 49/94 (52%)
Frame = -3
Query: 537 LKIMPXQKQTFPDXXHVFKAFVAIXDNXGHIGLGVKCXKXVAXAIXGAIXLAKLSVXPVR 358
++I +K+T FKAFV D GH+ L VA AI GAI L + S+
Sbjct: 13 IRIKSYKKKTHAGQQTRFKAFVVFRDYNGHVSL------EVATAIRGAIILDRSSIAIAW 66
Query: 357 RGYWGNKXGKPHTVPCKVTGKCGSVXVRLIPAPR 256
G+ GNK KPHTV C+VT SV V I APR
Sbjct: 67 GGWSGNKIAKPHTVSCRVTRLYCSVLVHHISAPR 100
Score = 46.0 bits (104), Expect = 6e-04
Identities = 27/61 (44%), Positives = 31/61 (50%)
Frame = -2
Query: 268 SCPSCTGIVSAPVPKKLLQMAGVQDCYTSARGSTGXLGNFXXXXXXXXXXXXXYLTPDLW 89
S P T I+SAPVPKKLL+MA + D + ARG T L N LT D W
Sbjct: 97 SAPRGTDILSAPVPKKLLRMASIDDGDSLARGCTAILDN-VIKATYDISKTYVSLTSDFW 155
Query: 88 R 86
R
Sbjct: 156 R 156
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 63.3 bits (147), Expect = 4e-09
Identities = 39/102 (38%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Frame = -3
Query: 543 EVLKIMPXQKQTFPDXXHVFKAFVAIXDNXGHIGLGVKCXKXVAXAIXGAIXLAKLSVXP 364
EV+ + QK T FKA VA + G++G+G K + AI A A L+V P
Sbjct: 71 EVVDVGIIQKMTSNGQSTRFKAIVAAGNENGYLGIGQGKAKQMRIAIEKANNQALLNVGP 130
Query: 363 VRRGY--WGNKXGKPHTVPCKVTGKCGSVXVRLIPAPRVLVL 244
++ G W + + H+VP KV GK GSV + ++PAPR L L
Sbjct: 131 IKLGCGSWECRCDQKHSVPFKVRGKGGSVVIEILPAPRGLGL 172
Score = 34.7 bits (76), Expect = 1.4
Identities = 14/32 (43%), Positives = 24/32 (75%)
Frame = -2
Query: 262 PSCTGIVSAPVPKKLLQMAGVQDCYTSARGST 167
P G+V+ ++LL++AG++D YT+A+GST
Sbjct: 167 PRGLGLVAGGKIRRLLELAGLKDAYTTAKGST 198
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 61.7 bits (143), Expect = 1e-08
Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Frame = -3
Query: 546 NEVLKIMPXQKQTFPDXXHVFKAFVAIXDNXGHIGLGVKCXKXVAXAIXGAIXLAKLSVX 367
++VL + Q+ T F + ++ G++GL + K VA I AI AKL++
Sbjct: 35 DDVLAVNMIQRMTDSGRRVRFNVLCVVGNSDGYVGLAICKGKEVASTIRKAIDKAKLNMI 94
Query: 366 PVRR--GYWGNKXGKPHTVPCKVTGKCGSVXVRLIPAP 259
PV R G W + G +VP K+TG+ GS V L+PAP
Sbjct: 95 PVMRGNGSWESGGGPGTSVPLKITGRSGSTRVTLMPAP 132
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 61.3 bits (142), Expect = 1e-08
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 2/105 (1%)
Frame = -3
Query: 519 QKQTFPDXXHVFKAFVAIXDNXGHIGLGVKCXKXVAXAIXGAIXLAKLSVXPVRRGY--W 346
QK+T ++ + D GH+G+G+ + A AI AKL++ V RG W
Sbjct: 72 QKKTAEGNKTRYEVIAIVGDKDGHVGVGLGRSSDLLIAREKAINRAKLNIIKVARGCGSW 131
Query: 345 GNKXGKPHTVPCKVTGKCGSVXVRLIPAPRVLVLCLRQFLRSFFR 211
G PH++P +V GK GSV V L PAP+ + + ++ FR
Sbjct: 132 ECACGAPHSIPYQVEGKSGSVRVILKPAPKGVGIVADDEIKKIFR 176
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 57.6 bits (133), Expect = 2e-07
Identities = 37/111 (33%), Positives = 57/111 (51%), Gaps = 2/111 (1%)
Frame = -3
Query: 546 NEVLKIMPXQKQTFPDXXHVFKAFVAIXDNXGHIGLGVKCXKXVAXAIXGAIXLAKLSVX 367
+EVL I Q+ T F+ VA+ + G++G V AI AI +AKL++
Sbjct: 101 DEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGYLGYAQARDDQVGGAIQKAIDVAKLNII 160
Query: 366 PVRRGY--WGNKXGKPHTVPCKVTGKCGSVXVRLIPAPRVLVLCLRQFLRS 220
V RG W ++ G +++ K GK GSV V + PAP+ L L + +R+
Sbjct: 161 EVDRGSGSWEDQPGGTNSLTRKAEGKAGSVTVEIQPAPQGLGLAAAETVRN 211
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 52.4 bits (120), Expect = 7e-06
Identities = 35/88 (39%), Positives = 41/88 (46%)
Frame = -3
Query: 519 QKQTFPDXXHVFKAFVAIXDNXGHIGLGVKCXKXVAXAIXGAIXLAKLSVXPVRRGYWGN 340
QKQT + K F D GH+GLG+KC K VA A G K+ + R
Sbjct: 1 QKQTQTGQKNRLKTFCCYGDYNGHVGLGIKCSKEVATAFQG--LWVKMQLGETR------ 52
Query: 339 KXGKPHTVPCKVTGKCGSVXVRLIPAPR 256
+ V KVT GSV V LIPAPR
Sbjct: 53 -LSRSTLVQYKVTSHYGSVLVHLIPAPR 79
Score = 43.2 bits (97), Expect = 0.004
Identities = 22/38 (57%), Positives = 24/38 (63%)
Frame = -2
Query: 262 PSCTGIVSAPVPKKLLQMAGVQDCYTSARGSTGXLGNF 149
P TGIVSAPV K L AG+ +CY SAR T L NF
Sbjct: 78 PRGTGIVSAPVLTKFLMNAGIYNCYISARCYTATLYNF 115
>UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000502977 UniRef100 entry -
Rattus norvegicus
Length = 140
Score = 51.6 bits (118), Expect = 1e-05
Identities = 24/35 (68%), Positives = 25/35 (71%)
Frame = -2
Query: 253 TGIVSAPVPKKLLQMAGVQDCYTSARGSTGXLGNF 149
TGI SAPVP K L MAG+ DCYTSARG T L F
Sbjct: 38 TGISSAPVPTKPLMMAGIDDCYTSARGCTASLDYF 72
Score = 47.6 bits (108), Expect = 2e-04
Identities = 22/30 (73%), Positives = 22/30 (73%)
Frame = -3
Query: 345 GNKXGKPHTVPCKVTGKCGSVXVRLIPAPR 256
GNK GK H V CKVTG CGSV V LIPA R
Sbjct: 7 GNKIGKTHIVLCKVTGCCGSVLVHLIPAHR 36
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 51.6 bits (118), Expect = 1e-05
Identities = 27/63 (42%), Positives = 33/63 (52%)
Frame = -2
Query: 247 IVSAPVPKKLLQMAGVQDCYTSARGSTGXLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTK 68
IVS VP+KL+ A + CYTSAR T LGN TP+LW++ TK
Sbjct: 128 IVSVLVPRKLMLRASIDSCYTSARSYTVTLGNIAKATFDAVSKTSHS-TPNLWKEAVFTK 186
Query: 67 SPY 59
SPY
Sbjct: 187 SPY 189
Score = 44.8 bits (101), Expect = 0.001
Identities = 33/83 (39%), Positives = 44/83 (53%)
Frame = -3
Query: 546 NEVLKIMPXQKQTFPDXXHVFKAFVAIXDNXGHIGLGVKCXKXVAXAIXGAIXLAKLSVX 367
++VLKI+P + D F +F I + GH G+GVKC K V A+ + + LS
Sbjct: 36 DKVLKIIPLSRFR-NDQWTRFNSFDTI-NYGGHNGIGVKCSKKVGTAVGLSSWSSFLSSC 93
Query: 366 PVRRGYWGNKXGKPHTVPCKVTG 298
+ R Y GN KP T PCK TG
Sbjct: 94 -LPRDYCGNNIRKP-TYPCKRTG 114
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 46.0 bits (104), Expect = 6e-04
Identities = 23/36 (63%), Positives = 25/36 (69%)
Frame = -3
Query: 546 NEVLKIMPXQKQTFPDXXHVFKAFVAIXDNXGHIGL 439
+EVLKIMP QKQT FKAFVAI D GH+GL
Sbjct: 79 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGL 114
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 45.6 bits (103), Expect = 8e-04
Identities = 27/61 (44%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -3
Query: 435 VKCXKXVAXAIXGAIXLAKLSVXPVRRGYWGNKXGKPHTVPCKVTG-KCGSVXVRLIPAP 259
V C K V A AI L + + GY GNK G PHT+PC VT + V V L AP
Sbjct: 94 VNCSKEVGTAAQRAITLLSF-LFSTQTGYKGNKIGNPHTIPCDVTATEKNLVLVCLTTAP 152
Query: 258 R 256
R
Sbjct: 153 R 153
>UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 163
Score = 44.4 bits (100), Expect = 0.002
Identities = 18/35 (51%), Positives = 27/35 (77%)
Frame = -2
Query: 253 TGIVSAPVPKKLLQMAGVQDCYTSARGSTGXLGNF 149
+ +V+ VPKK+L+ AG++D +TS+RGST L NF
Sbjct: 3 SSVVATRVPKKVLKFAGIEDVFTSSRGSTKTLSNF 37
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 42.7 bits (96), Expect = 0.005
Identities = 27/68 (39%), Positives = 32/68 (47%)
Frame = -2
Query: 502 GQXTRFQGICCHXRQQXSYWFGCEVQXXSRXCHXRRYXPCXAVSXTSPKRLLG*QDXKAT 323
GQ TRF+ R Y EV H R + P A+ +RLLG QD +A
Sbjct: 47 GQRTRFKAFVA-IRDYNGYAGRVEVLQGGGRRHPRGHHPDQALHCHRAQRLLGEQDRQAP 105
Query: 322 HRPLQGHR 299
HRPLQG R
Sbjct: 106 HRPLQGDR 113
Score = 37.5 bits (83), Expect = 0.20
Identities = 19/35 (54%), Positives = 23/35 (65%)
Frame = -3
Query: 546 NEVLKIMPXQKQTFPDXXHVFKAFVAIXDNXGHIG 442
+EVLKIMP +K+T FKAFVAI D G+ G
Sbjct: 32 DEVLKIMPVRKETRAGQRTRFKAFVAIRDYNGYAG 66
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 41.1 bits (92), Expect = 0.016
Identities = 23/47 (48%), Positives = 26/47 (55%)
Frame = -3
Query: 543 EVLKIMPXQKQTFPDXXHVFKAFVAIXDNXGHIGLGVKCXKXVAXAI 403
E L I P QKQT FKA+V + D+ HIGLG K K V AI
Sbjct: 108 EPLAIGPVQKQTCAGQKTRFKAYVVVGDSHQHIGLGWKSAKEVQGAI 154
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 38.3 bits (85), Expect = 0.12
Identities = 28/94 (29%), Positives = 42/94 (44%)
Frame = -3
Query: 543 EVLKIMPXQKQTFPDXXHVFKAFVAIXDNXGHIGLGVKCXKXVAXAIXGAIXLAKLSVXP 364
++LKI K T F A+ D G IGLG+ V AI AI AK ++
Sbjct: 12 KLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVPDAIRKAIAAAKKNIVK 71
Query: 363 VRRGYWGNKXGKPHTVPCKVTGKCGSVXVRLIPA 262
+ K +T+P ++ GK G+ + + PA
Sbjct: 72 ISL--------KNNTIPHEIAGKWGATTLWMAPA 97
>UniRef50_UPI0000DA3DCA Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Rattus norvegicus
Length = 68
Score = 37.1 bits (82), Expect = 0.27
Identities = 23/59 (38%), Positives = 28/59 (47%)
Frame = -2
Query: 244 VSAPVPKKLLQMAGVQDCYTSARGSTGXLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTK 68
V V KK L +A +QDCY AR + LGN+ YLT DLW + TK
Sbjct: 10 VFTTVLKKKLLLASIQDCYMIARVHSLMLGNYAKATFYVFSMTSNYLTFDLWTENVCTK 68
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 35.1 bits (77), Expect = 1.1
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -2
Query: 106 LTPDLWRDIPLTKSPYSEF 50
LTPDLW++ TKSPY EF
Sbjct: 139 LTPDLWKETVFTKSPYQEF 157
>UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n=1;
Mus musculus|Rep: UPI000056598D UniRef100 entry - Mus
musculus
Length = 239
Score = 34.7 bits (76), Expect = 1.4
Identities = 29/76 (38%), Positives = 32/76 (42%), Gaps = 4/76 (5%)
Frame = -2
Query: 268 SCPSCTGIVSAPVPKKLLQM----AGVQDCYTSARGSTGXLGNFXXXXXXXXXXXXXYLT 101
+ PS T I+S VPK LL + A D SA G T LG LT
Sbjct: 161 TAPS-TCIISGLVPKNLLLLLLLLASTDDRCISASGCTDALGRLAKTTFDAISKTYSCLT 219
Query: 100 PDLWRDIPLTKSPYSE 53
PDLW TK YSE
Sbjct: 220 PDLWNK---TKPLYSE 232
>UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;
n=2; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 208
Score = 33.5 bits (73), Expect = 3.3
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +3
Query: 150 KFPKXPVEPRADV*QSCTPAI*RSFLGTGADTIPVHEG 263
K PK V+P A V QS P+ FLGT A+ +PV G
Sbjct: 12 KSPKVAVQPLAHVQQSSIPSSSSHFLGTEAEVMPVPMG 49
Score = 32.7 bits (71), Expect = 5.8
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +2
Query: 260 GAGISRTXTEPHLPVTLQGTVCGFPILLP 346
GAG+ T TEP P+TL G +CG LLP
Sbjct: 49 GAGMKSTRTEPQWPITLCG-LCGACCLLP 76
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 32.7 bits (71), Expect = 5.8
Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Frame = -3
Query: 486 FKAFVAIXDNXGHIGLGVKCXKXVAXAIXGAIXLAKLSV--XPVRRGYWGNKXGKPHTVP 313
F V + D GH+G G K V AI I AK +V P+ G TVP
Sbjct: 50 FSTLVVVGDRKGHVGFGHGKAKEVTLAIAKGIEKAKKNVIRVPIVDG----------TVP 99
Query: 312 CKVTGKCGSVXVRLIPAPR 256
V G G+ + ++PA R
Sbjct: 100 HDVIGTFGATKIIVLPARR 118
>UniRef50_A2A4F1 Cluster: Reproductive homeobox 7; n=3; Mus
musculus|Rep: Reproductive homeobox 7 - Mus musculus
(Mouse)
Length = 281
Score = 32.3 bits (70), Expect = 7.6
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +2
Query: 227 RNWRRHNTSTRGAGISRTXTEPHLPVTLQGTVCGFPILLPQ*PLRTGXTD 376
R RR +R G S + P + L TV P+L+P PLR G T+
Sbjct: 158 RAQRRQRVGSRSRGQSVSLKCPRIRPVLVSTVQPVPVLVPHRPLRDGFTE 207
>UniRef50_A4QUU0 Cluster: Putative uncharacterized protein; n=2;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 299
Score = 32.3 bits (70), Expect = 7.6
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 17 FSCYTMTVLDFEL*VWRLSQRDIPPQVRSEVGICLGNGSVCG 142
F+ YT DF + W+LSQ+ +PP RS +G G+ G
Sbjct: 217 FNKYTQAAKDFIVEQWQLSQKSLPP--RSSIGSAQPTGTANG 256
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 510,379,539
Number of Sequences: 1657284
Number of extensions: 9437153
Number of successful extensions: 20319
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 19757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20301
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35822246242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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