Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0344
         (323 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL110490-2|CAB54440.1|   91|Caenorhabditis elegans Hypothetical ...   130   2e-31
Z66524-1|CAA91420.2|  500|Caenorhabditis elegans Hypothetical pr...    30   0.33 
AC006608-4|AAF39758.2|  381|Caenorhabditis elegans Hypothetical ...    30   0.33 
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr...    28   1.3  
AY594354-1|AAT01444.1|  539|Caenorhabditis elegans cofactor-inde...    27   3.1  
AF039713-12|AAO12419.1|  521|Caenorhabditis elegans Hypothetical...    27   3.1  
AF039713-11|AAB96720.1|  539|Caenorhabditis elegans Hypothetical...    27   3.1  
AF039048-9|AAB94233.1|  362|Caenorhabditis elegans Hypothetical ...    27   4.1  
AF039048-8|AAT68896.1|  367|Caenorhabditis elegans Hypothetical ...    27   4.1  
Z81054-8|CAB02886.3|  341|Caenorhabditis elegans Hypothetical pr...    26   7.2  
Z68314-7|CAA92662.2|  872|Caenorhabditis elegans Hypothetical pr...    26   7.2  
AL032639-10|CAA21634.1|  108|Caenorhabditis elegans Hypothetical...    26   7.2  

>AL110490-2|CAB54440.1|   91|Caenorhabditis elegans Hypothetical
           protein Y48B6A.2 protein.
          Length = 91

 Score =  130 bits (315), Expect = 2e-31
 Identities = 55/76 (72%), Positives = 64/76 (84%)
 Frame = +3

Query: 27  MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 206
           MAKRTKKVGI GKYGTRYGASLRKM KK+EV QH++YTCSFCGK+AMKR   GIW+C +C
Sbjct: 1   MAKRTKKVGIVGKYGTRYGASLRKMAKKLEVAQHSRYTCSFCGKEAMKRKATGIWNCAKC 60

Query: 207 KRTVAGGAWVFSTTAA 254
            + VAGGA+V+ T  A
Sbjct: 61  HKVVAGGAYVYGTVTA 76


>Z66524-1|CAA91420.2|  500|Caenorhabditis elegans Hypothetical
           protein T13H5.4 protein.
          Length = 500

 Score = 30.3 bits (65), Expect = 0.33
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = +2

Query: 5   CIGEVYQNGQTYQKGWNYWQIWHTLRCLST*NGQKDGSNPTRKVYLLILW 154
           C  + Y+  + +QK +N W+  H +RCL   N     +N T+    L LW
Sbjct: 410 CGNQTYKGPKAFQKHFNEWRHSHGMRCLGIPN-TSHFANITKIKDALDLW 458


>AC006608-4|AAF39758.2|  381|Caenorhabditis elegans Hypothetical
           protein C15F1.5a protein.
          Length = 381

 Score = 30.3 bits (65), Expect = 0.33
 Identities = 19/57 (33%), Positives = 26/57 (45%)
 Frame = +3

Query: 90  LRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRCKRTVAGGAWVFSTTAAHH 260
           L+K  KKM V   A    S    + M  +C G    + C+R + G A +   TA HH
Sbjct: 32  LKKSTKKMRVCPVAHCYSSLTAPEPMTSTCEG----ENCQRKIMGNAEIL-RTACHH 83


>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
           protein C16A3.7 protein.
          Length = 1119

 Score = 28.3 bits (60), Expect = 1.3
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 123 QHAKYTCSFCGKDAMKRSCVGIWSCKRC 206
           ++ KY C+ C      R   G+WSCK C
Sbjct: 229 ENNKYECAICYTRITTRQ--GVWSCKTC 254


>AY594354-1|AAT01444.1|  539|Caenorhabditis elegans
           cofactor-independent phosphoglyceratemutase protein.
          Length = 539

 Score = 27.1 bits (57), Expect = 3.1
 Identities = 14/59 (23%), Positives = 26/59 (44%)
 Frame = +3

Query: 96  KMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRCKRTVAGGAWVFSTTAAHHADLL 272
           KM++++E   H    C+F   D +  + V   + K C+ T      ++  T  H   L+
Sbjct: 405 KMIEQLEAGTHPFIMCNFAPPDMVGHTGVYEAAVKACEATDIAIGRIYEATQKHGYSLM 463


>AF039713-12|AAO12419.1|  521|Caenorhabditis elegans Hypothetical
           protein F57B10.3b protein.
          Length = 521

 Score = 27.1 bits (57), Expect = 3.1
 Identities = 14/59 (23%), Positives = 26/59 (44%)
 Frame = +3

Query: 96  KMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRCKRTVAGGAWVFSTTAAHHADLL 272
           KM++++E   H    C+F   D +  + V   + K C+ T      ++  T  H   L+
Sbjct: 387 KMIEQLEAGTHPFIMCNFAPPDMVGHTGVYEAAVKACEATDIAIGRIYEATQKHGYSLM 445


>AF039713-11|AAB96720.1|  539|Caenorhabditis elegans Hypothetical
           protein F57B10.3a protein.
          Length = 539

 Score = 27.1 bits (57), Expect = 3.1
 Identities = 14/59 (23%), Positives = 26/59 (44%)
 Frame = +3

Query: 96  KMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRCKRTVAGGAWVFSTTAAHHADLL 272
           KM++++E   H    C+F   D +  + V   + K C+ T      ++  T  H   L+
Sbjct: 405 KMIEQLEAGTHPFIMCNFAPPDMVGHTGVYEAAVKACEATDIAIGRIYEATQKHGYSLM 463


>AF039048-9|AAB94233.1|  362|Caenorhabditis elegans Hypothetical
           protein F16B4.2a protein.
          Length = 362

 Score = 26.6 bits (56), Expect = 4.1
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +3

Query: 168 KRSCVGIWSCKRCKRTVAGGAWVFSTT 248
           K  C+  W+C  C +T+   +W F +T
Sbjct: 333 KEKCILDWTCSTCDKTIE--SWYFRST 357


>AF039048-8|AAT68896.1|  367|Caenorhabditis elegans Hypothetical
           protein F16B4.2b protein.
          Length = 367

 Score = 26.6 bits (56), Expect = 4.1
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +3

Query: 168 KRSCVGIWSCKRCKRTVAGGAWVFSTT 248
           K  C+  W+C  C +T+   +W F +T
Sbjct: 338 KEKCILDWTCSTCDKTIE--SWYFRST 362


>Z81054-8|CAB02886.3|  341|Caenorhabditis elegans Hypothetical
           protein F01D4.7 protein.
          Length = 341

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -2

Query: 322 IFLCLLFKLLYFT*PPDSRSA*WAAVVENTQAPP 221
           ++ C ++ L  F   P  RSA W AV E    PP
Sbjct: 259 LYGCAMYSLRIFL--PGERSAVWQAVTEFCYTPP 290


>Z68314-7|CAA92662.2|  872|Caenorhabditis elegans Hypothetical
           protein F07H5.8 protein.
          Length = 872

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 14/58 (24%), Positives = 28/58 (48%)
 Frame = +2

Query: 107 KDGSNPTRKVYLLILW*GCYETFLCRHLVL*AMQEDCSRRSLGILHYCCPSCRSAVRR 280
           K+ + PT K+ + +L     ET  C         + C  + L  + +C P+C++A ++
Sbjct: 780 KESAEPTFKLEI-VLKKPMEETVTCAPQCANQCVDQCKTQLLTQIEFCLPACQNACQQ 836


>AL032639-10|CAA21634.1|  108|Caenorhabditis elegans Hypothetical
           protein Y38F1A.9 protein.
          Length = 108

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 69  GTRYGASLRKMVKKMEVTQHAK 134
           G RY + ++KMV K  VT H K
Sbjct: 46  GDRYVSKIKKMVGKFTVTLHIK 67


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,150,690
Number of Sequences: 27780
Number of extensions: 171206
Number of successful extensions: 527
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 527
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 387641448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)