Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0340
         (548 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    25   0.51 
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    25   0.51 
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    25   0.51 
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    24   1.2  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     22   3.6  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   3.6  
AB201717-1|BAD90662.1|  107|Apis mellifera apime-corazonin prepr...    22   4.7  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   8.2  

>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 25.0 bits (52), Expect = 0.51
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +2

Query: 71  QSMPKIKPESFQKNNRICQTLQEDPYFEIDEVIG 172
           +  P   P+  Q+   I  TL+  P+F   EV+G
Sbjct: 448 EGYPHAVPKYIQRLKAIRATLKASPFFASHEVVG 481


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 25.0 bits (52), Expect = 0.51
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +2

Query: 71  QSMPKIKPESFQKNNRICQTLQEDPYFEIDEVIG 172
           +  P   P+  Q+   I  TL+  P+F   EV+G
Sbjct: 363 EGYPHAVPKYIQRLKAIRATLKASPFFASHEVVG 396


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 25.0 bits (52), Expect = 0.51
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +2

Query: 71  QSMPKIKPESFQKNNRICQTLQEDPYFEIDEVIG 172
           +  P   P+  Q+   I  TL+  P+F   EV+G
Sbjct: 682 EGYPHAVPKYIQRLKAIRATLKASPFFASHEVVG 715


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/19 (52%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
 Frame = -2

Query: 337 Y*DV-RWRHSSSAGHQDTR 284
           Y DV +W H+ S+G +DTR
Sbjct: 9   YGDVYQWNHTVSSGERDTR 27


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +2

Query: 242 NATPKSFREYGTT 280
           +A PK F+E+GTT
Sbjct: 100 DALPKLFKEWGTT 112


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = -2

Query: 511 SSLRETWSRGPVSVET*GGVQCAGSQLYFHHVP 413
           SSL   + RG     T G +   GS  +FH  P
Sbjct: 603 SSLYGRFKRGKYEEPTVGEISQDGSSPHFHQSP 635


>AB201717-1|BAD90662.1|  107|Apis mellifera apime-corazonin
           preprohormone protein.
          Length = 107

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -2

Query: 142 IFL*SLTYSIVFLETFRFYFG 80
           +F+ SLT +IV  +TF +  G
Sbjct: 9   LFILSLTITIVMCQTFTYSHG 29


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/32 (25%), Positives = 17/32 (53%)
 Frame = -1

Query: 224 YTFFRTSCSTCNRSSMASLSLHRFRNTDLPVK 129
           Y     +CST +  ++ ++S+ R+     P+K
Sbjct: 262 YIAMDVTCSTSSIFNLVAISIDRYIAVTQPIK 293


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,620
Number of Sequences: 438
Number of extensions: 4030
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15704448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)