Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0339
(598 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S81027-1|AAB36035.1| 608|Drosophila melanogaster Msr-110 protein. 41 0.001
BT001836-1|AAN71591.1| 617|Drosophila melanogaster RH50422p pro... 41 0.001
AY118587-1|AAM49956.1| 608|Drosophila melanogaster LD44960p pro... 41 0.001
AE014296-971|AAF50768.1| 617|Drosophila melanogaster CG10596-PA... 41 0.001
AE014296-970|AAN12100.1| 608|Drosophila melanogaster CG10596-PB... 41 0.001
AE014296-972|AAN12101.1| 625|Drosophila melanogaster CG10596-PC... 36 0.032
AY069287-1|AAL39432.1| 392|Drosophila melanogaster GM14337p pro... 29 6.3
AE014134-1217|AAN10611.1| 392|Drosophila melanogaster CG31908-P... 29 6.3
AE014134-1216|AAN10610.1| 392|Drosophila melanogaster CG31908-P... 29 6.3
>S81027-1|AAB36035.1| 608|Drosophila melanogaster Msr-110 protein.
Length = 608
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/25 (76%), Positives = 21/25 (84%), Gaps = 1/25 (4%)
Frame = +1
Query: 91 SMATITMKPEYPPSEVYST-SEPPP 162
SMAT+ MKP+Y SEVYST SEPPP
Sbjct: 8 SMATVQMKPDYAASEVYSTASEPPP 32
Score = 36.3 bits (80), Expect = 0.032
Identities = 15/28 (53%), Positives = 24/28 (85%)
Frame = +2
Query: 260 ASSWVAARSSCHQLEQLDAMLDKELALE 343
ASS++ A++SC Q++ LD++L+KEL LE
Sbjct: 64 ASSYLQAKASCDQVQALDSVLEKELMLE 91
Score = 35.1 bits (77), Expect = 0.073
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = +3
Query: 177 RVSTSVQIAKIAALTVVASSFILGTF 254
R + SV+IAKI A T++ S+FILG+F
Sbjct: 36 RQANSVKIAKITAFTIIVSAFILGSF 61
>BT001836-1|AAN71591.1| 617|Drosophila melanogaster RH50422p
protein.
Length = 617
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/25 (76%), Positives = 21/25 (84%), Gaps = 1/25 (4%)
Frame = +1
Query: 91 SMATITMKPEYPPSEVYST-SEPPP 162
SMAT+ MKP+Y SEVYST SEPPP
Sbjct: 8 SMATVQMKPDYAASEVYSTASEPPP 32
Score = 36.3 bits (80), Expect = 0.032
Identities = 15/28 (53%), Positives = 24/28 (85%)
Frame = +2
Query: 260 ASSWVAARSSCHQLEQLDAMLDKELALE 343
ASS++ A++SC Q++ LD++L+KEL LE
Sbjct: 73 ASSYLQAKASCDQVQALDSVLEKELMLE 100
Score = 35.1 bits (77), Expect = 0.073
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = +3
Query: 177 RVSTSVQIAKIAALTVVASSFILGTF 254
R + SV+IAKI A T++ S+FILG+F
Sbjct: 45 RQANSVKIAKITAFTIIVSAFILGSF 70
>AY118587-1|AAM49956.1| 608|Drosophila melanogaster LD44960p
protein.
Length = 608
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/25 (76%), Positives = 21/25 (84%), Gaps = 1/25 (4%)
Frame = +1
Query: 91 SMATITMKPEYPPSEVYST-SEPPP 162
SMAT+ MKP+Y SEVYST SEPPP
Sbjct: 8 SMATVQMKPDYAASEVYSTASEPPP 32
Score = 36.3 bits (80), Expect = 0.032
Identities = 15/28 (53%), Positives = 24/28 (85%)
Frame = +2
Query: 260 ASSWVAARSSCHQLEQLDAMLDKELALE 343
ASS++ A++SC Q++ LD++L+KEL LE
Sbjct: 64 ASSYLQAKASCDQVQALDSVLEKELMLE 91
Score = 35.1 bits (77), Expect = 0.073
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = +3
Query: 177 RVSTSVQIAKIAALTVVASSFILGTF 254
R + SV+IAKI A T++ S+FILG+F
Sbjct: 36 RQANSVKIAKITAFTIIVSAFILGSF 61
>AE014296-971|AAF50768.1| 617|Drosophila melanogaster CG10596-PA,
isoform A protein.
Length = 617
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/25 (76%), Positives = 21/25 (84%), Gaps = 1/25 (4%)
Frame = +1
Query: 91 SMATITMKPEYPPSEVYST-SEPPP 162
SMAT+ MKP+Y SEVYST SEPPP
Sbjct: 8 SMATVQMKPDYAASEVYSTASEPPP 32
Score = 36.3 bits (80), Expect = 0.032
Identities = 15/28 (53%), Positives = 24/28 (85%)
Frame = +2
Query: 260 ASSWVAARSSCHQLEQLDAMLDKELALE 343
ASS++ A++SC Q++ LD++L+KEL LE
Sbjct: 73 ASSYLQAKASCDQVQALDSVLEKELMLE 100
Score = 35.1 bits (77), Expect = 0.073
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = +3
Query: 177 RVSTSVQIAKIAALTVVASSFILGTF 254
R + SV+IAKI A T++ S+FILG+F
Sbjct: 45 RQANSVKIAKITAFTIIVSAFILGSF 70
>AE014296-970|AAN12100.1| 608|Drosophila melanogaster CG10596-PB,
isoform B protein.
Length = 608
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/25 (76%), Positives = 21/25 (84%), Gaps = 1/25 (4%)
Frame = +1
Query: 91 SMATITMKPEYPPSEVYST-SEPPP 162
SMAT+ MKP+Y SEVYST SEPPP
Sbjct: 8 SMATVQMKPDYAASEVYSTASEPPP 32
Score = 36.3 bits (80), Expect = 0.032
Identities = 15/28 (53%), Positives = 24/28 (85%)
Frame = +2
Query: 260 ASSWVAARSSCHQLEQLDAMLDKELALE 343
ASS++ A++SC Q++ LD++L+KEL LE
Sbjct: 64 ASSYLQAKASCDQVQALDSVLEKELMLE 91
Score = 35.1 bits (77), Expect = 0.073
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = +3
Query: 177 RVSTSVQIAKIAALTVVASSFILGTF 254
R + SV+IAKI A T++ S+FILG+F
Sbjct: 36 RQANSVKIAKITAFTIIVSAFILGSF 61
>AE014296-972|AAN12101.1| 625|Drosophila melanogaster CG10596-PC,
isoform C protein.
Length = 625
Score = 36.3 bits (80), Expect = 0.032
Identities = 15/28 (53%), Positives = 24/28 (85%)
Frame = +2
Query: 260 ASSWVAARSSCHQLEQLDAMLDKELALE 343
ASS++ A++SC Q++ LD++L+KEL LE
Sbjct: 81 ASSYLQAKASCDQVQALDSVLEKELMLE 108
Score = 35.1 bits (77), Expect = 0.073
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = +3
Query: 177 RVSTSVQIAKIAALTVVASSFILGTF 254
R + SV+IAKI A T++ S+FILG+F
Sbjct: 53 RQANSVKIAKITAFTIIVSAFILGSF 78
>AY069287-1|AAL39432.1| 392|Drosophila melanogaster GM14337p
protein.
Length = 392
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/61 (22%), Positives = 21/61 (34%)
Frame = +1
Query: 79 HQPDSMATITMKPEYPPSEVYSTSEPPPGLSGTGCXXXXXXXXXXXXXXXXPPSSWEPFI 258
H P + + PS+ ++ PP G G+G P SW P +
Sbjct: 261 HNPQHQHQHQQQQQQQPSQHFNQRLPPYGGGGSGLGGVGMQAQAPPQSSPNPQQSWSPVV 320
Query: 259 G 261
G
Sbjct: 321 G 321
>AE014134-1217|AAN10611.1| 392|Drosophila melanogaster CG31908-PB,
isoform B protein.
Length = 392
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/61 (22%), Positives = 21/61 (34%)
Frame = +1
Query: 79 HQPDSMATITMKPEYPPSEVYSTSEPPPGLSGTGCXXXXXXXXXXXXXXXXPPSSWEPFI 258
H P + + PS+ ++ PP G G+G P SW P +
Sbjct: 261 HNPQHQHQHQQQQQQQPSQHFNQRLPPYGGGGSGLGGVGMQAQAPPQSSPNPQQSWSPVV 320
Query: 259 G 261
G
Sbjct: 321 G 321
>AE014134-1216|AAN10610.1| 392|Drosophila melanogaster CG31908-PA,
isoform A protein.
Length = 392
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/61 (22%), Positives = 21/61 (34%)
Frame = +1
Query: 79 HQPDSMATITMKPEYPPSEVYSTSEPPPGLSGTGCXXXXXXXXXXXXXXXXPPSSWEPFI 258
H P + + PS+ ++ PP G G+G P SW P +
Sbjct: 261 HNPQHQHQHQQQQQQQPSQHFNQRLPPYGGGGSGLGGVGMQAQAPPQSSPNPQQSWSPVV 320
Query: 259 G 261
G
Sbjct: 321 G 321
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,396,696
Number of Sequences: 53049
Number of extensions: 550925
Number of successful extensions: 1330
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1326
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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