Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0339
         (598 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    24   1.3  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   1.7  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    23   1.7  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   1.7  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   4.0  
AB050744-1|BAB17753.1|  238|Apis mellifera period protein protein.     21   6.9  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    21   9.2  

>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -3

Query: 164 PGGGSDVLYTSEGGYSG 114
           PG G DVL T E  +SG
Sbjct: 490 PGFGKDVLATDERSFSG 506


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -2

Query: 417 MQSRGHLLVAKAHPXPGHHFRRLCP 343
           +Q  GH    +A P PG   ++LCP
Sbjct: 243 VQLAGHQGNFRAGPTPGTILKKLCP 267


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -2

Query: 417 MQSRGHLLVAKAHPXPGHHFRRLCP 343
           +Q  GH    +A P PG   ++LCP
Sbjct: 158 VQLAGHQGNFRAGPTPGTILKKLCP 182


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -2

Query: 417 MQSRGHLLVAKAHPXPGHHFRRLCP 343
           +Q  GH    +A P PG   ++LCP
Sbjct: 477 VQLAGHQGNFRAGPTPGTILKKLCP 501


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 16/55 (29%), Positives = 25/55 (45%)
 Frame = +2

Query: 215 TNSGRFXXXXXXXXXASSWVAARSSCHQLEQLDAMLDKELALEGQSLRK*CPGXG 379
           TN G            S+  +AR + + L  +  M DK+  + G++LR  CP  G
Sbjct: 463 TNDGGLYKCIAASKVGSAEHSARLNVYGLPFIRHM-DKKAIVAGETLRVTCPVAG 516


>AB050744-1|BAB17753.1|  238|Apis mellifera period protein protein.
          Length = 238

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -3

Query: 164 PGGGSDVLYTSEGGYS 117
           PG G DVL T E  +S
Sbjct: 196 PGFGKDVLATDERSFS 211


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -2

Query: 537 LILDSAWFEV 508
           ++L SAWFEV
Sbjct: 1   MLLSSAWFEV 10


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,729
Number of Sequences: 438
Number of extensions: 3344
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)