Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0332
         (552 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY894575-1|AAX85114.1| 1214|Homo sapiens NBPF1 protein.                30   6.2  
AF379626-1|AAO15394.1|  502|Homo sapiens AC3 protein.                  30   6.2  
AF379622-1|AAO15391.1|  358|Homo sapiens AB18 protein.                 30   6.2  
AF379627-1|AAO15395.1|   96|Homo sapiens AD1 protein.                  29   8.2  

>AY894575-1|AAX85114.1| 1214|Homo sapiens NBPF1 protein.
          Length = 1214

 Score = 29.9 bits (64), Expect = 6.2
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -3

Query: 397  RSSGQRHRVDPVSVLEDSVDQLRLPVDVRFDVLDHYTHYR 278
            R SG    V+   VL+DS+D+      + F++ D + HYR
Sbjct: 1134 RLSGMLMEVEEPEVLQDSLDRCYSTPSMYFELPDSFQHYR 1173


>AF379626-1|AAO15394.1|  502|Homo sapiens AC3 protein.
          Length = 502

 Score = 29.9 bits (64), Expect = 6.2
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -3

Query: 397 RSSGQRHRVDPVSVLEDSVDQLRLPVDVRFDVLDHYTHYR 278
           R SG    V+   VL+DS+D+      + F++ D + HYR
Sbjct: 422 RLSGMLMEVEEPEVLQDSLDRCYSTPSMYFELPDSFQHYR 461


>AF379622-1|AAO15391.1|  358|Homo sapiens AB18 protein.
          Length = 358

 Score = 29.9 bits (64), Expect = 6.2
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -3

Query: 397 RSSGQRHRVDPVSVLEDSVDQLRLPVDVRFDVLDHYTHYR 278
           R SG    V+   VL+DS+D+      + F++ D + HYR
Sbjct: 278 RLSGMLMEVEEPEVLQDSLDRCYSTPSMYFELPDSFQHYR 317


>AF379627-1|AAO15395.1|   96|Homo sapiens AD1 protein.
          Length = 96

 Score = 29.5 bits (63), Expect = 8.2
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = -3

Query: 397 RSSGQRHRVDPVSVLEDSVDQLRLPVDVRFDVLDHYTHYR 278
           R SG    V+   +L+DS+D+    + + F++ D + HYR
Sbjct: 16  RLSGVLMEVEEPEILQDSLDRCYSTLSLFFELPDSFQHYR 55


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,498,063
Number of Sequences: 237096
Number of extensions: 1115221
Number of successful extensions: 3311
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3311
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5477474182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)